RNA–Protein interactions for RNA: ENST00000487565.5

GARNL3-218, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-218ENST00000487565 CTAG1AP78358 180 aa4.82□□□□□ -1.64
GARNL3-218ENST00000487565 HAMPP81172 84 aa4.82□□□□□ -1.64
GARNL3-218ENST00000487565 LBHQ53QV2 105 aaPredicted RBP4.82□□□□□ -1.64
GARNL3-218ENST00000487565 APOBP04114 4563 aaKnown RBP4.81□□□□□ -1.64
GARNL3-218ENST00000487565 TRBV10-2A0A0K0K1G8 114 aa4.81□□□□□ -1.64
GARNL3-218ENST00000487565 GAGE10A6NGK3 116 aa4.81□□□□□ -1.64
GARNL3-218ENST00000487565 PCP4L1A6NKN8 68 aa4.81□□□□□ -1.64
GARNL3-218ENST00000487565 M0R378 163 aa4.81□□□□□ -1.64
GARNL3-218ENST00000487565 HINT1P49773 126 aaPredicted RBP4.81□□□□□ -1.64
GARNL3-218ENST00000487565 FXYD2P54710 66 aa4.81□□□□□ -1.64
GARNL3-218ENST00000487565 UBE2BP63146 152 aa4.81□□□□□ -1.64
GARNL3-218ENST00000487565 S100A7L2Q5SY68 101 aa4.81□□□□□ -1.64
GARNL3-218ENST00000487565 MRPL55Q7Z7F7 128 aaKnown RBP4.81□□□□□ -1.64
GARNL3-218ENST00000487565 CIRBP-AS1Q8TBR5 109 aa4.81□□□□□ -1.64
GARNL3-218ENST00000487565 C7orf33Q8WU49 177 aa4.81□□□□□ -1.64
GARNL3-218ENST00000487565 C22orf24Q9Y442 160 aa4.81□□□□□ -1.64
GARNL3-218ENST00000487565 TRAV13-2A0A0B4J235 113 aa4.8□□□□□ -1.64
GARNL3-218ENST00000487565 PRR3P79522 188 aaKnown RBP4.8□□□□□ -1.64
GARNL3-218ENST00000487565 BATFQ16520 125 aa4.8□□□□□ -1.64
GARNL3-218ENST00000487565 PHF5AQ7RTV0 110 aaKnown RBP4.8□□□□□ -1.64
GARNL3-218ENST00000487565 KRTAP7-1Q8IUC3 87 aa4.8□□□□□ -1.64
GARNL3-218ENST00000487565 OR13C6PQ8NH95 151 aa4.8□□□□□ -1.64
GARNL3-218ENST00000487565 RAB37Q96AX2 223 aa4.8□□□□□ -1.64
GARNL3-218ENST00000487565 NHP2Q9NX24 153 aaKnown RBP4.8□□□□□ -1.64
GARNL3-218ENST00000487565 IGKV2-28A0A075B6P5 120 aa4.79□□□□□ -1.64
GARNL3-218ENST00000487565 A0A0B4J2C4 111 aa4.79□□□□□ -1.64
GARNL3-218ENST00000487565 TRBV10-3A0A0K0K1G6 114 aa4.79□□□□□ -1.64
GARNL3-218ENST00000487565 A6NDN8 102 aa4.79□□□□□ -1.64
GARNL3-218ENST00000487565 IGKV2D-28P01615 120 aa4.79□□□□□ -1.64
GARNL3-218ENST00000487565 RPL13AP40429 203 aaKnown RBP4.79□□□□□ -1.64
GARNL3-218ENST00000487565 BVES-AS1Q5T3Y7 98 aa4.79□□□□□ -1.64
GARNL3-218ENST00000487565 LINC00337Q8N6G1 96 aa4.79□□□□□ -1.64
GARNL3-218ENST00000487565 CBY1Q9Y3M2 126 aa4.79□□□□□ -1.64
GARNL3-218ENST00000487565 RPL37AP8A6NKH3 93 aa4.78□□□□□ -1.64
GARNL3-218ENST00000487565 EPM2AB3EWF7 344 aa4.78□□□□□ -1.64
GARNL3-218ENST00000487565 K7ERJ3 54 aa4.78□□□□□ -1.64
GARNL3-218ENST00000487565 LINC00167Q96N53 147 aa4.78□□□□□ -1.64
GARNL3-218ENST00000487565 BIRC6Q9NR09 4857 aa4.77□□□□□ -1.65
GARNL3-218ENST00000487565 TRAV23DV6A0A075B6W5 121 aa4.77□□□□□ -1.65
GARNL3-218ENST00000487565 CDK2AP2O75956 126 aa4.77□□□□□ -1.65
GARNL3-218ENST00000487565 IGLV6-57P01721 117 aa4.77□□□□□ -1.65
GARNL3-218ENST00000487565 CFC1BP0CG36 223 aa4.77□□□□□ -1.65
GARNL3-218ENST00000487565 CFC1P0CG37 223 aa4.77□□□□□ -1.65
GARNL3-218ENST00000487565 Q1RN00 199 aa4.77□□□□□ -1.65
GARNL3-218ENST00000487565 TMEM126AQ9H061 195 aa4.77□□□□□ -1.65
GARNL3-218ENST00000487565 IGLV1-50A0A075B6I6 118 aa4.76□□□□□ -1.65
GARNL3-218ENST00000487565 A0A1B0GWB2 263 aa4.76□□□□□ -1.65
GARNL3-218ENST00000487565 H7C2G1 150 aa4.76□□□□□ -1.65
GARNL3-218ENST00000487565 RYR1P21817 5038 aa4.76□□□□□ -1.65
GARNL3-218ENST00000487565 XGP55808 180 aa4.76□□□□□ -1.65
GARNL3-218ENST00000487565 KRTAP2-2Q9BYT5 123 aa4.76□□□□□ -1.65
GARNL3-218ENST00000487565 PRO1854Q9UHT4 67 aa4.76□□□□□ -1.65
GARNL3-218ENST00000487565 REG3GQ6UW15 175 aa4.75□□□□□ -1.65
GARNL3-218ENST00000487565 DIRC1Q969H9 104 aa4.75□□□□□ -1.65
GARNL3-218ENST00000487565 ETDCA0A1B0GVM5 59 aa4.74□□□□□ -1.65
GARNL3-218ENST00000487565 ZNF73O43830 326 aaPredicted RBP4.74□□□□□ -1.65
GARNL3-218ENST00000487565 KRTAP11-1Q8IUC1 163 aa4.74□□□□□ -1.65
GARNL3-218ENST00000487565 KCNQ1DNQ9H478 68 aa4.74□□□□□ -1.65
GARNL3-218ENST00000487565 PSORS1C2Q9UIG4 136 aa4.74□□□□□ -1.65
GARNL3-218ENST00000487565 KIAA1109Q2LD37 5005 aa4.74□□□□□ -1.65
GARNL3-218ENST00000487565 BCE1O60756 84 aa4.73□□□□□ -1.65
GARNL3-218ENST00000487565 TSPAN13O95857 204 aa4.73□□□□□ -1.65
GARNL3-218ENST00000487565 SMR3BP02814 79 aaPredicted RBP4.73□□□□□ -1.65
GARNL3-218ENST00000487565 RPL37AP61513 92 aaKnown RBP4.73□□□□□ -1.65
GARNL3-218ENST00000487565 C6orf99Q4VX62 202 aa4.73□□□□□ -1.65
GARNL3-218ENST00000487565 C1orf137Q5JT78 98 aa4.73□□□□□ -1.65
GARNL3-218ENST00000487565 SMIM11BQ8TCY0 68 aa4.73□□□□□ -1.65
GARNL3-218ENST00000487565 SNHG12Q9BXW3 62 aa4.73□□□□□ -1.65
GARNL3-218ENST00000487565 UBE2AP49459 152 aa4.72□□□□□ -1.65
GARNL3-218ENST00000487565 PSMB2P49721 201 aa4.72□□□□□ -1.65
GARNL3-218ENST00000487565 FAM19A1Q7Z5A9 133 aa4.72□□□□□ -1.65
GARNL3-218ENST00000487565 HSPG2P98160 4391 aa4.71□□□□□ -1.66
GARNL3-218ENST00000487565 COX7BP24311 80 aa4.71□□□□□ -1.66
GARNL3-218ENST00000487565 SPRR1AP35321 89 aa4.71□□□□□ -1.66
GARNL3-218ENST00000487565 RPL28P46779 137 aaKnown RBP4.71□□□□□ -1.66
GARNL3-218ENST00000487565 PRLHP81277 87 aa4.71□□□□□ -1.66
GARNL3-218ENST00000487565 VAMP3Q15836 100 aa4.71□□□□□ -1.66
GARNL3-218ENST00000487565 COL5A1-AS1Q5SY13 56 aa4.71□□□□□ -1.66
GARNL3-218ENST00000487565 FAT1Q14517 4588 aa4.7□□□□□ -1.66
GARNL3-218ENST00000487565 TRBV7-6A0A0J9YX20 115 aa4.7□□□□□ -1.66
GARNL3-218ENST00000487565 ELOF1P60002 83 aaKnown RBP4.7□□□□□ -1.66
GARNL3-218ENST00000487565 Q6ZRX8 168 aa4.7□□□□□ -1.66
GARNL3-218ENST00000487565 KRTAP4-16G5E9R7 235 aaPredicted RBP4.69□□□□□ -1.66
GARNL3-218ENST00000487565 IGLV7-43P04211 117 aa4.69□□□□□ -1.66
GARNL3-218ENST00000487565 COX6CP09669 75 aa4.69□□□□□ -1.66
GARNL3-218ENST00000487565 LYRM7Q5U5X0 104 aa4.69□□□□□ -1.66
GARNL3-218ENST00000487565 Q5VSD8 79 aa4.69□□□□□ -1.66
GARNL3-218ENST00000487565 NAA38Q9BRA0 125 aaKnown RBP4.69□□□□□ -1.66
GARNL3-218ENST00000487565 TAX1BP3O14907 124 aa4.68□□□□□ -1.66
GARNL3-218ENST00000487565 HIGD2AQ9BW72 106 aa4.68□□□□□ -1.66
GARNL3-218ENST00000487565 DHRS4-AS1Q9P1J3 65 aa4.68□□□□□ -1.66
GARNL3-218ENST00000487565 HERC2O95714 4834 aa4.67□□□□□ -1.66
GARNL3-218ENST00000487565 H0Y9J4 135 aa4.67□□□□□ -1.66
GARNL3-218ENST00000487565 H0YGX0 51 aa4.67□□□□□ -1.66
GARNL3-218ENST00000487565 H3BUT2 72 aa4.67□□□□□ -1.66
GARNL3-218ENST00000487565 SLC25A20O43772 301 aa4.67□□□□□ -1.66
GARNL3-218ENST00000487565 SCGB1C2P0DMR2 95 aa4.67□□□□□ -1.66
GARNL3-218ENST00000487565 KRTAP13-1Q8IUC0 172 aa4.67□□□□□ -1.66
GARNL3-218ENST00000487565 PRR26Q8N8Z3 221 aa4.67□□□□□ -1.66
GARNL3-218ENST00000487565 ZNF861PO60384 105 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms