RNA–Protein interactions for RNA: ENST00000485955.1

VPS41-213, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-213ENST00000485955 NMSQ5H8A3 153 aa1.39□□□□□ -2.19
VPS41-213ENST00000485955 CSAG1Q6PB30 78 aa1.39□□□□□ -2.19
VPS41-213ENST00000485955 ZNF818PQ6ZRF7 136 aa1.39□□□□□ -2.19
VPS41-213ENST00000485955 Q8N6K4 173 aa1.39□□□□□ -2.19
VPS41-213ENST00000485955 IFI27L1Q96BM0 104 aa1.39□□□□□ -2.19
VPS41-213ENST00000485955 DMAC1Q96GE9 116 aa1.39□□□□□ -2.19
VPS41-213ENST00000485955 ODF3Q96PU9 254 aa1.39□□□□□ -2.19
VPS41-213ENST00000485955 HIGD1BQ9P298 99 aa1.39□□□□□ -2.19
VPS41-213ENST00000485955 PRO1854Q9UHT4 67 aa1.39□□□□□ -2.19
VPS41-213ENST00000485955 CCL26Q9Y258 94 aa1.39□□□□□ -2.19
VPS41-213ENST00000485955 U3KQA8 63 aa1.39□□□□□ -2.19
VPS41-213ENST00000485955 PLCE1Q9P212 2302 aa1.39□□□□□ -2.19
VPS41-213ENST00000485955 FAT1Q14517 4588 aa1.38□□□□□ -2.19
VPS41-213ENST00000485955 TRBV7-3A0A075B6L6 115 aa1.38□□□□□ -2.19
VPS41-213ENST00000485955 TEX49A0A1B0GTD5 131 aa1.38□□□□□ -2.19
VPS41-213ENST00000485955 NUPR2A6NF83 97 aa1.38□□□□□ -2.19
VPS41-213ENST00000485955 BCE1O60756 84 aa1.38□□□□□ -2.19
VPS41-213ENST00000485955 COX6CP09669 75 aa1.38□□□□□ -2.19
VPS41-213ENST00000485955 EFNA4P52798 201 aa1.38□□□□□ -2.19
VPS41-213ENST00000485955 EDDM3BP56851 147 aa1.38□□□□□ -2.19
VPS41-213ENST00000485955 KLKP1Q107X0 134 aa1.38□□□□□ -2.19
VPS41-213ENST00000485955 C18orf32Q8TCD1 76 aa1.38□□□□□ -2.19
VPS41-213ENST00000485955 C4orf3Q8WVX3 66 aa1.38□□□□□ -2.19
VPS41-213ENST00000485955 PATE1Q8WXA2 126 aa1.38□□□□□ -2.19
VPS41-213ENST00000485955 LINC01600Q96MT4 127 aa1.38□□□□□ -2.19
VPS41-213ENST00000485955 LIMD2Q9BT23 127 aa1.38□□□□□ -2.19
VPS41-213ENST00000485955 ORMDL1Q9P0S3 153 aa1.38□□□□□ -2.19
VPS41-213ENST00000485955 MED12Q93074 2177 aa1.38□□□□□ -2.19
VPS41-213ENST00000485955 DNAH2Q9P225 4427 aa1.37□□□□□ -2.19
VPS41-213ENST00000485955 HEATR5AQ86XA9 2040 aa1.37□□□□□ -2.19
VPS41-213ENST00000485955 TRAV22A0A0B4J277 110 aa1.37□□□□□ -2.19
VPS41-213ENST00000485955 SMIM11AP58511 58 aa1.37□□□□□ -2.19
VPS41-213ENST00000485955 CNBPP62633 177 aaKnown RBP1.37□□□□□ -2.19
VPS41-213ENST00000485955 C10orf128Q5T292 105 aa1.37□□□□□ -2.19
VPS41-213ENST00000485955 CFAP126Q5VTH2 177 aa1.37□□□□□ -2.19
VPS41-213ENST00000485955 Q5VV11 94 aa1.37□□□□□ -2.19
VPS41-213ENST00000485955 DNAH6Q9C0G6 4158 aa1.37□□□□□ -2.19
VPS41-213ENST00000485955 VPS13DQ5THJ4 4388 aa1.37□□□□□ -2.19
VPS41-213ENST00000485955 IGKV3-7A0A075B6H7 116 aa1.36□□□□□ -2.19
VPS41-213ENST00000485955 TRBV6-8A0A0A6YYG3 113 aa1.36□□□□□ -2.19
VPS41-213ENST00000485955 A0A0G2JQZ4 141 aa1.36□□□□□ -2.19
VPS41-213ENST00000485955 SDHAF1A6NFY7 115 aa1.36□□□□□ -2.19
VPS41-213ENST00000485955 C10orf142B7Z368 130 aa1.36□□□□□ -2.19
VPS41-213ENST00000485955 CHKB-CPT1BH3BT56 60 aa1.36□□□□□ -2.19
VPS41-213ENST00000485955 APOBP04114 4563 aaKnown RBP1.36□□□□□ -2.19
VPS41-213ENST00000485955 ACYP1P07311 99 aa1.36□□□□□ -2.19
VPS41-213ENST00000485955 GNGT1P63211 74 aa1.36□□□□□ -2.19
VPS41-213ENST00000485955 TPRXLQ17RH7 258 aa1.36□□□□□ -2.19
VPS41-213ENST00000485955 TMEM170BQ5T4T1 132 aa1.36□□□□□ -2.19
VPS41-213ENST00000485955 LINC00643Q86TS7 51 aa1.36□□□□□ -2.19
VPS41-213ENST00000485955 FAM223AQ8IWN6 122 aa1.36□□□□□ -2.19
VPS41-213ENST00000485955 SPACA4Q8TDM5 124 aa1.36□□□□□ -2.19
VPS41-213ENST00000485955 BPESC1Q9GZL8 116 aa1.36□□□□□ -2.19
VPS41-213ENST00000485955 NDUFA4L2Q9NRX3 87 aa1.36□□□□□ -2.19
VPS41-213ENST00000485955 MRPL36Q9P0J6 103 aaKnown RBP1.36□□□□□ -2.19
VPS41-213ENST00000485955 WNK2Q9Y3S1 2297 aa1.36□□□□□ -2.19
VPS41-213ENST00000485955 FREM1Q5H8C1 2179 aa1.35□□□□□ -2.19
VPS41-213ENST00000485955 LRP2P98164 4655 aa1.35□□□□□ -2.19
VPS41-213ENST00000485955 DNAH17Q9UFH2 4485 aa1.35□□□□□ -2.19
VPS41-213ENST00000485955 TRBV25-1A0A075B6N4 114 aa1.35□□□□□ -2.19
VPS41-213ENST00000485955 TRBV6-7A0A0A0MS04 114 aa1.35□□□□□ -2.19
VPS41-213ENST00000485955 A0A0J9YY99 117 aa1.35□□□□□ -2.19
VPS41-213ENST00000485955 TRBV6-4A0A1B0GX49 114 aa1.35□□□□□ -2.19
VPS41-213ENST00000485955 CLPSL1A2RUU4 121 aa1.35□□□□□ -2.19
VPS41-213ENST00000485955 TMEM14DPA8MWL7 114 aa1.35□□□□□ -2.19
VPS41-213ENST00000485955 PPYP01298 95 aa1.35□□□□□ -2.19
VPS41-213ENST00000485955 ELOF1P60002 83 aaKnown RBP1.35□□□□□ -2.19
VPS41-213ENST00000485955 ZNF56Q15929 161 aa1.35□□□□□ -2.19
VPS41-213ENST00000485955 SFTA2Q6UW10 78 aa1.35□□□□□ -2.19
VPS41-213ENST00000485955 DYNLRB1Q9NP97 96 aa1.35□□□□□ -2.19
VPS41-213ENST00000485955 CDC42SE2Q9NRR3 84 aa1.35□□□□□ -2.19
VPS41-213ENST00000485955 LENEPQ9Y5L5 61 aa1.35□□□□□ -2.19
VPS41-213ENST00000485955 DOCK10Q96BY6 2186 aa1.34□□□□□ -2.19
VPS41-213ENST00000485955 CADP27708 2225 aa1.34□□□□□ -2.19
VPS41-213ENST00000485955 A0A087WWC5 75 aa1.34□□□□□ -2.19
VPS41-213ENST00000485955 HIGD1CA8MV81 97 aa1.34□□□□□ -2.19
VPS41-213ENST00000485955 UMAD1C9J7I0 102 aa1.34□□□□□ -2.19
VPS41-213ENST00000485955 JMJD7-PLA2G4BH0Y9G9 81 aa1.34□□□□□ -2.19
VPS41-213ENST00000485955 HMGN4O00479 90 aa1.34□□□□□ -2.19
VPS41-213ENST00000485955 IGHV3-30P01768 117 aa1.34□□□□□ -2.19
VPS41-213ENST00000485955 HMGN2P05204 90 aaKnown RBP1.34□□□□□ -2.19
VPS41-213ENST00000485955 IGHV3-30-5P0DP03 117 aa1.34□□□□□ -2.19
VPS41-213ENST00000485955 PSMG4Q5JS54 123 aa1.34□□□□□ -2.19
VPS41-213ENST00000485955 C10orf55Q5SWW7 151 aa1.34□□□□□ -2.19
VPS41-213ENST00000485955 KIAA1549Q9HCM3 1950 aa1.34□□□□□ -2.2
VPS41-213ENST00000485955 SCN3AQ9NY46 2000 aa1.33□□□□□ -2.2
VPS41-213ENST00000485955 PKHD1L1Q86WI1 4243 aa1.33□□□□□ -2.2
VPS41-213ENST00000485955 LOC101927531A0A1B0GV80 90 aa1.33□□□□□ -2.2
VPS41-213ENST00000485955 C7orf77A4D0Y5 90 aa1.33□□□□□ -2.2
VPS41-213ENST00000485955 ZNF815PA8K554 130 aa1.33□□□□□ -2.2
VPS41-213ENST00000485955 F8WEM9 126 aa1.33□□□□□ -2.2
VPS41-213ENST00000485955 IGLV3-1P01715 115 aa1.33□□□□□ -2.2
VPS41-213ENST00000485955 PDE6GP18545 87 aa1.33□□□□□ -2.2
VPS41-213ENST00000485955 SSBP1Q04837 148 aaKnown RBP1.33□□□□□ -2.2
VPS41-213ENST00000485955 XAF1Q6GPH4 301 aa1.33□□□□□ -2.2
VPS41-213ENST00000485955 C20orf197Q8N268 126 aa1.33□□□□□ -2.2
VPS41-213ENST00000485955 FLG2Q5D862 2391 aaPredicted RBP1.33□□□□□ -2.2
VPS41-213ENST00000485955 PKD1P98161 4303 aa1.32□□□□□ -2.2
VPS41-213ENST00000485955 ARHGAP32A7KAX9 2087 aa1.32□□□□□ -2.2
VPS41-213ENST00000485955 MPDZO75970 2070 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 277.3 ms