RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 DNAH14Q0VDD8 3507 aa2.52□□□□□ -2.01
RTN4-213ENST00000485749 NOTCH2Q04721 2471 aa2.52□□□□□ -2.01
RTN4-213ENST00000485749 CNTRLQ7Z7A1 2325 aa2.52□□□□□ -2.01
RTN4-213ENST00000485749 DNAJC13O75165 2243 aa2.52□□□□□ -2.01
RTN4-213ENST00000485749 NCR3O14931 201 aa2.52□□□□□ -2.01
RTN4-213ENST00000485749 DEFB1P60022 68 aa2.52□□□□□ -2.01
RTN4-213ENST00000485749 LCE3CQ5T5A8 94 aa2.52□□□□□ -2.01
RTN4-213ENST00000485749 DEFB123Q8N688 67 aa2.52□□□□□ -2.01
RTN4-213ENST00000485749 SPACA4Q8TDM5 124 aa2.52□□□□□ -2.01
RTN4-213ENST00000485749 KRTAP4-3Q9BYR4 195 aa2.52□□□□□ -2.01
RTN4-213ENST00000485749 NAV3Q8IVL0 2385 aa2.52□□□□□ -2.01
RTN4-213ENST00000485749 LAMA3Q16787 3333 aa2.52□□□□□ -2.01
RTN4-213ENST00000485749 INTS1Q8N201 2190 aaKnown RBP2.51□□□□□ -2.01
RTN4-213ENST00000485749 IGKV2D-24A0A075B6R9 120 aa2.51□□□□□ -2.01
RTN4-213ENST00000485749 IGLV6-57P01721 117 aa2.51□□□□□ -2.01
RTN4-213ENST00000485749 Q8N9L7 120 aa2.51□□□□□ -2.01
RTN4-213ENST00000485749 KCNQ1DNQ9H478 68 aa2.51□□□□□ -2.01
RTN4-213ENST00000485749 LINC00472Q9H8W2 130 aa2.51□□□□□ -2.01
RTN4-213ENST00000485749 CR1P17927 2039 aa2.51□□□□□ -2.01
RTN4-213ENST00000485749 SZT2Q5T011 3432 aa2.5□□□□□ -2.01
RTN4-213ENST00000485749 LINC00959A0A1B0GUT2 108 aa2.5□□□□□ -2.01
RTN4-213ENST00000485749 A8MTW9 85 aa2.5□□□□□ -2.01
RTN4-213ENST00000485749 H3BUX3 64 aa2.5□□□□□ -2.01
RTN4-213ENST00000485749 HTN1P15515 57 aa2.5□□□□□ -2.01
RTN4-213ENST00000485749 LAMA2P24043 3122 aaKnown RBP2.5□□□□□ -2.01
RTN4-213ENST00000485749 CDH23Q9H251 3354 aa2.49□□□□□ -2.01
RTN4-213ENST00000485749 INE1O15225 51 aa2.49□□□□□ -2.01
RTN4-213ENST00000485749 LINC00158P58513 81 aa2.49□□□□□ -2.01
RTN4-213ENST00000485749 COX6A2Q02221 97 aa2.49□□□□□ -2.01
RTN4-213ENST00000485749 BRD3OSQ6XYD6 125 aa2.49□□□□□ -2.01
RTN4-213ENST00000485749 Q6ZQY7 126 aa2.49□□□□□ -2.01
RTN4-213ENST00000485749 SMIM11BQ8TCY0 68 aa2.49□□□□□ -2.01
RTN4-213ENST00000485749 XIRP2A4UGR9 3374 aa2.49□□□□□ -2.01
RTN4-213ENST00000485749 KNTC1P50748 2209 aa2.49□□□□□ -2.01
RTN4-213ENST00000485749 SDK1Q7Z5N4 2213 aa2.49□□□□□ -2.01
RTN4-213ENST00000485749 DEFB131AP59861 70 aa2.48□□□□□ -2.01
RTN4-213ENST00000485749 AHCTF1Q8WYP5 2266 aa2.48□□□□□ -2.01
RTN4-213ENST00000485749 RANBP2P49792 3224 aaKnown RBP2.47□□□□□ -2.01
RTN4-213ENST00000485749 IGKV2-28A0A075B6P5 120 aa2.47□□□□□ -2.01
RTN4-213ENST00000485749 IGKV2D-28P01615 120 aa2.47□□□□□ -2.01
RTN4-213ENST00000485749 PRB2P02812 416 aaPredicted RBP2.47□□□□□ -2.01
RTN4-213ENST00000485749 TOMM7Q9P0U1 55 aa2.47□□□□□ -2.01
RTN4-213ENST00000485749 REV3LO60673 3130 aa2.46□□□□□ -2.01
RTN4-213ENST00000485749 ZNF318Q5VUA4 2279 aa2.46□□□□□ -2.02
RTN4-213ENST00000485749 M0R2N4 97 aa2.46□□□□□ -2.02
RTN4-213ENST00000485749 KRTAP13-3Q3SY46 172 aa2.46□□□□□ -2.02
RTN4-213ENST00000485749 SSBP3-AS1Q7Z2R9 100 aa2.46□□□□□ -2.02
RTN4-213ENST00000485749 CCL19Q99731 98 aa2.46□□□□□ -2.02
RTN4-213ENST00000485749 TECTAO75443 2155 aa2.46□□□□□ -2.02
RTN4-213ENST00000485749 FAM186AA6NE01 2351 aa2.45□□□□□ -2.02
RTN4-213ENST00000485749 VCANP13611 3396 aa2.45□□□□□ -2.02
RTN4-213ENST00000485749 Q8IZM0 81 aa2.45□□□□□ -2.02
RTN4-213ENST00000485749 CADP27708 2225 aa2.45□□□□□ -2.02
RTN4-213ENST00000485749 KRTAP11-1Q8IUC1 163 aa2.44□□□□□ -2.02
RTN4-213ENST00000485749 ARHGAP32A7KAX9 2087 aa2.43□□□□□ -2.02
RTN4-213ENST00000485749 ZFHX2Q9C0A1 2572 aaPredicted RBP2.43□□□□□ -2.02
RTN4-213ENST00000485749 DEFB131BA0A096LNP1 70 aa2.43□□□□□ -2.02
RTN4-213ENST00000485749 IGKV2-24A0A0C4DH68 120 aa2.43□□□□□ -2.02
RTN4-213ENST00000485749 LCE3AQ5TA76 89 aa2.43□□□□□ -2.02
RTN4-213ENST00000485749 LINC00575Q6W349 94 aa2.43□□□□□ -2.02
RTN4-213ENST00000485749 ARFGEF3Q5TH69 2177 aa2.43□□□□□ -2.02
RTN4-213ENST00000485749 ZFHX3Q15911 3703 aa2.42□□□□□ -2.02
RTN4-213ENST00000485749 LAMA1P25391 3075 aa2.42□□□□□ -2.02
RTN4-213ENST00000485749 ABCA4P78363 2273 aa2.42□□□□□ -2.02
RTN4-213ENST00000485749 Q6ZRX8 168 aa2.42□□□□□ -2.02
RTN4-213ENST00000485749 NOP10Q9NPE3 64 aaKnown RBP2.42□□□□□ -2.02
RTN4-213ENST00000485749 PLCE1Q9P212 2302 aa2.42□□□□□ -2.02
RTN4-213ENST00000485749 USP34Q70CQ2 3546 aa2.41□□□□□ -2.02
RTN4-213ENST00000485749 PRB1P04280 392 aa2.41□□□□□ -2.02
RTN4-213ENST00000485749 C10orf99Q6UWK7 81 aa2.41□□□□□ -2.02
RTN4-213ENST00000485749 ABCA1O95477 2261 aa2.4□□□□□ -2.02
RTN4-213ENST00000485749 SPTBN5Q9NRC6 3674 aaKnown RBP2.4□□□□□ -2.03
RTN4-213ENST00000485749 LY6G6CO95867 125 aa2.4□□□□□ -2.03
RTN4-213ENST00000485749 DEFB136Q30KP8 78 aa2.4□□□□□ -2.03
RTN4-213ENST00000485749 PLAC4Q8WY50 150 aa2.4□□□□□ -2.03
RTN4-213ENST00000485749 SPEGQ15772 3267 aa2.4□□□□□ -2.03
RTN4-213ENST00000485749 ICE1Q9Y2F5 2266 aa2.39□□□□□ -2.03
RTN4-213ENST00000485749 A0A096LNT2 108 aa2.39□□□□□ -2.03
RTN4-213ENST00000485749 PRO0255Q9UI72 69 aa2.39□□□□□ -2.03
RTN4-213ENST00000485749 GPR179Q6PRD1 2367 aa2.39□□□□□ -2.03
RTN4-213ENST00000485749 FREM2Q5SZK8 3169 aa2.39□□□□□ -2.03
RTN4-213ENST00000485749 GVQW2A0A096LPI5 108 aaPredicted RBP2.38□□□□□ -2.03
RTN4-213ENST00000485749 ANGP03950 147 aaKnown RBP2.38□□□□□ -2.03
RTN4-213ENST00000485749 WDFY3Q8IZQ1 3526 aa2.38□□□□□ -2.03
RTN4-213ENST00000485749 CEP290O15078 2479 aa2.37□□□□□ -2.03
RTN4-213ENST00000485749 PRRC2AP48634 2157 aaKnown RBP2.37□□□□□ -2.03
RTN4-213ENST00000485749 WDR87Q6ZQQ6 2873 aa2.37□□□□□ -2.03
RTN4-213ENST00000485749 URB1O60287 2271 aaKnown RBP2.37□□□□□ -2.03
RTN4-213ENST00000485749 PKDREJQ9NTG1 2253 aa2.37□□□□□ -2.03
RTN4-213ENST00000485749 DEFB130BP0DP73 79 aa2.37□□□□□ -2.03
RTN4-213ENST00000485749 DEFB130AP0DP74 79 aa2.37□□□□□ -2.03
RTN4-213ENST00000485749 PP632Q6XCG6 107 aa2.37□□□□□ -2.03
RTN4-213ENST00000485749 TRIOO75962 3097 aa2.37□□□□□ -2.03
RTN4-213ENST00000485749 CFAP54Q96N23 3096 aa2.37□□□□□ -2.03
RTN4-213ENST00000485749 ZDBF2Q9HCK1 2354 aa2.37□□□□□ -2.03
RTN4-213ENST00000485749 KMT2BQ9UMN6 2715 aaPredicted RBP2.36□□□□□ -2.03
RTN4-213ENST00000485749 CLPSL2Q6UWE3 100 aa2.36□□□□□ -2.03
RTN4-213ENST00000485749 MYO15AQ9UKN7 3530 aa2.36□□□□□ -2.03
RTN4-213ENST00000485749 ZZEF1O43149 2961 aa2.34□□□□□ -2.03
RTN4-213ENST00000485749 LELP1Q5T871 98 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms