RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 UBE2BP63146 152 aa12.83□□□□□ -0.36
VCPKMT-203ENST00000484763 C6orf99Q4VX62 202 aa12.82□□□□□ -0.36
VCPKMT-203ENST00000484763 LYRM7Q5U5X0 104 aa12.82□□□□□ -0.36
VCPKMT-203ENST00000484763 SCGB1C2P0DMR2 95 aa12.81□□□□□ -0.36
VCPKMT-203ENST00000484763 FABP2P12104 132 aa12.81□□□□□ -0.36
VCPKMT-203ENST00000484763 DIRC1Q969H9 104 aa12.81□□□□□ -0.36
VCPKMT-203ENST00000484763 SCXQ7RTU7 201 aa12.81□□□□□ -0.36
VCPKMT-203ENST00000484763 CIRBP-AS1Q8TBR5 109 aa12.81□□□□□ -0.36
VCPKMT-203ENST00000484763 LRP1BQ9NZR2 4599 aa12.8□□□□□ -0.36
VCPKMT-203ENST00000484763 DYNC1H1Q14204 4646 aaKnown RBP12.79□□□□□ -0.36
VCPKMT-203ENST00000484763 VAMP3Q15836 100 aa12.78□□□□□ -0.36
VCPKMT-203ENST00000484763 REG3GQ6UW15 175 aa12.77□□□□□ -0.37
VCPKMT-203ENST00000484763 A0A1B0GV90 55 aa12.76□□□□□ -0.37
VCPKMT-203ENST00000484763 SPRR1AP35321 89 aa12.76□□□□□ -0.37
VCPKMT-203ENST00000484763 H0YGX0 51 aa12.76□□□□□ -0.37
VCPKMT-203ENST00000484763 KRTAP11-1Q8IUC1 163 aa12.76□□□□□ -0.37
VCPKMT-203ENST00000484763 TRBV7-6A0A0J9YX20 115 aa12.75□□□□□ -0.37
VCPKMT-203ENST00000484763 SPCS1Q9Y6A9 102 aa12.74□□□□□ -0.37
VCPKMT-203ENST00000484763 HAMPP81172 84 aa12.74□□□□□ -0.37
VCPKMT-203ENST00000484763 CLEC2BQ92478 149 aa12.74□□□□□ -0.37
VCPKMT-203ENST00000484763 ELOF1P60002 83 aaKnown RBP12.73□□□□□ -0.37
VCPKMT-203ENST00000484763 TRBV20-1A0A075B6N2 111 aa12.72□□□□□ -0.37
VCPKMT-203ENST00000484763 ETDCA0A1B0GVM5 59 aa12.72□□□□□ -0.37
VCPKMT-203ENST00000484763 KRTAP4-16G5E9R7 235 aaPredicted RBP12.72□□□□□ -0.37
VCPKMT-203ENST00000484763 TCL1BO95988 128 aa12.72□□□□□ -0.37
VCPKMT-203ENST00000484763 COX7BP24311 80 aa12.72□□□□□ -0.37
VCPKMT-203ENST00000484763 K7EP34 96 aa12.7□□□□□ -0.38
VCPKMT-203ENST00000484763 FAM218AQ96MZ4 157 aa12.7□□□□□ -0.38
VCPKMT-203ENST00000484763 ATXN8Q156A1 80 aa12.69□□□□□ -0.38
VCPKMT-203ENST00000484763 LST1O00453 97 aa12.69□□□□□ -0.38
VCPKMT-203ENST00000484763 B5MCH6 92 aa12.68□□□□□ -0.38
VCPKMT-203ENST00000484763 Q6ZRX8 168 aa12.68□□□□□ -0.38
VCPKMT-203ENST00000484763 GTF2H5Q6ZYL4 71 aa12.68□□□□□ -0.38
VCPKMT-203ENST00000484763 LINC00528Q8N1L1 170 aa12.68□□□□□ -0.38
VCPKMT-203ENST00000484763 FAM19A1Q7Z5A9 133 aa12.67□□□□□ -0.38
VCPKMT-203ENST00000484763 LINC00575Q6W349 94 aa12.67□□□□□ -0.38
VCPKMT-203ENST00000484763 PSORS1C2Q9UIG4 136 aa12.67□□□□□ -0.38
VCPKMT-203ENST00000484763 BCE1O60756 84 aa12.66□□□□□ -0.38
VCPKMT-203ENST00000484763 APOBP04114 4563 aaKnown RBP12.65□□□□□ -0.39
VCPKMT-203ENST00000484763 A0A1B0GX51 115 aa12.65□□□□□ -0.39
VCPKMT-203ENST00000484763 SLC25A20O43772 301 aa12.65□□□□□ -0.39
VCPKMT-203ENST00000484763 XGP55808 180 aa12.65□□□□□ -0.39
VCPKMT-203ENST00000484763 H3BMG7 143 aa12.64□□□□□ -0.39
VCPKMT-203ENST00000484763 SNCGO76070 127 aa12.64□□□□□ -0.39
VCPKMT-203ENST00000484763 TRACP01848 142 aa12.64□□□□□ -0.39
VCPKMT-203ENST00000484763 hADV29S1A0JD25 119 aa12.62□□□□□ -0.39
VCPKMT-203ENST00000484763 PRLHP81277 87 aa12.62□□□□□ -0.39
VCPKMT-203ENST00000484763 INAFM2P0DMQ5 153 aa12.62□□□□□ -0.39
VCPKMT-203ENST00000484763 UBE2AP49459 152 aa12.62□□□□□ -0.39
VCPKMT-203ENST00000484763 C1orf137Q5JT78 98 aa12.62□□□□□ -0.39
VCPKMT-203ENST00000484763 DHRS4-AS1Q9P1J3 65 aa12.62□□□□□ -0.39
VCPKMT-203ENST00000484763 H0Y9J4 135 aa12.61□□□□□ -0.39
VCPKMT-203ENST00000484763 DNAL4O96015 105 aa12.61□□□□□ -0.39
VCPKMT-203ENST00000484763 Q9BRP9 147 aa12.61□□□□□ -0.39
VCPKMT-203ENST00000484763 UBE2V1Q13404 147 aa12.58□□□□□ -0.4
VCPKMT-203ENST00000484763 KRTAP13-1Q8IUC0 172 aa12.58□□□□□ -0.4
VCPKMT-203ENST00000484763 SMCR5Q8TEV8 140 aa12.57□□□□□ -0.4
VCPKMT-203ENST00000484763 C9JAW5 83 aa12.55□□□□□ -0.4
VCPKMT-203ENST00000484763 HIGD2AQ9BW72 106 aa12.55□□□□□ -0.4
VCPKMT-203ENST00000484763 Q6ZQY7 126 aa12.54□□□□□ -0.4
VCPKMT-203ENST00000484763 IGLV7-43P04211 117 aa12.53□□□□□ -0.4
VCPKMT-203ENST00000484763 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.53□□□□□ -0.4
VCPKMT-203ENST00000484763 EPPK1P58107 5090 aaKnown RBP12.53□□□□□ -0.4
VCPKMT-203ENST00000484763 CDK2AP2O75956 126 aa12.53□□□□□ -0.4
VCPKMT-203ENST00000484763 MTURNQ8N3F0 131 aa12.53□□□□□ -0.4
VCPKMT-203ENST00000484763 ORMDL1Q9P0S3 153 aa12.52□□□□□ -0.41
VCPKMT-203ENST00000484763 ZNF861PO60384 105 aa12.51□□□□□ -0.41
VCPKMT-203ENST00000484763 ERC2-IT1O76042 136 aa12.51□□□□□ -0.41
VCPKMT-203ENST00000484763 SMR3BP02814 79 aaPredicted RBP12.51□□□□□ -0.41
VCPKMT-203ENST00000484763 PRO0461Q9UI25 63 aa12.49□□□□□ -0.41
VCPKMT-203ENST00000484763 RPL37AP61513 92 aaKnown RBP12.48□□□□□ -0.41
VCPKMT-203ENST00000484763 OCIAD2Q56VL3 154 aa12.48□□□□□ -0.41
VCPKMT-203ENST00000484763 VPS13BQ7Z7G8 4022 aa12.48□□□□□ -0.41
VCPKMT-203ENST00000484763 F8W1H4 67 aa12.48□□□□□ -0.41
VCPKMT-203ENST00000484763 H3BT86 120 aa12.47□□□□□ -0.41
VCPKMT-203ENST00000484763 GHRHP01286 108 aa12.46□□□□□ -0.41
VCPKMT-203ENST00000484763 BAALC-AS2P0C853 105 aa12.46□□□□□ -0.41
VCPKMT-203ENST00000484763 ST20-AS1Q8NBB2 130 aa12.46□□□□□ -0.42
VCPKMT-203ENST00000484763 ANKRD29Q8N6D5 301 aa12.45□□□□□ -0.42
VCPKMT-203ENST00000484763 H3BQ85 93 aa12.44□□□□□ -0.42
VCPKMT-203ENST00000484763 SMCPP49901 116 aaPredicted RBP12.44□□□□□ -0.42
VCPKMT-203ENST00000484763 TMEM256-PLSCR3K7ERE1 68 aa12.44□□□□□ -0.42
VCPKMT-203ENST00000484763 IGLV5-48A0A075B6I7 105 aa12.42□□□□□ -0.42
VCPKMT-203ENST00000484763 DEFB105AQ8NG35 78 aa12.42□□□□□ -0.42
VCPKMT-203ENST00000484763 HSPG2P98160 4391 aa12.42□□□□□ -0.42
VCPKMT-203ENST00000484763 LINC01547P58512 204 aaPredicted RBP12.41□□□□□ -0.42
VCPKMT-203ENST00000484763 PPDPFLQ8WWR9 84 aa12.41□□□□□ -0.42
VCPKMT-203ENST00000484763 LINC01600Q96MT4 127 aa12.41□□□□□ -0.42
VCPKMT-203ENST00000484763 SRRM2Q9UQ35 2752 aaKnown RBP12.41□□□□□ -0.42
VCPKMT-203ENST00000484763 FAT1Q14517 4588 aa12.4□□□□□ -0.42
VCPKMT-203ENST00000484763 RYR1P21817 5038 aa12.4□□□□□ -0.43
VCPKMT-203ENST00000484763 ZNF706Q9Y5V0 76 aaPredicted RBP12.39□□□□□ -0.43
VCPKMT-203ENST00000484763 TEX49A0A1B0GTD5 131 aa12.39□□□□□ -0.43
VCPKMT-203ENST00000484763 Q8N377 158 aa12.39□□□□□ -0.43
VCPKMT-203ENST00000484763 SPRR4Q96PI1 79 aa12.37□□□□□ -0.43
VCPKMT-203ENST00000484763 FAM229AH3BQW9 127 aa12.36□□□□□ -0.43
VCPKMT-203ENST00000484763 KRTAP10-4P60372 401 aaPredicted RBP12.36□□□□□ -0.43
VCPKMT-203ENST00000484763 GAGE2AQ6NT46 116 aa12.36□□□□□ -0.43
VCPKMT-203ENST00000484763 PLA2G1BP04054 148 aaKnown RBP12.34□□□□□ -0.43
VCPKMT-203ENST00000484763 SPRR1BP22528 89 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms