RNA–Protein interactions for RNA: ENST00000484487.1

PDZRN3-209, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 3

Gene PDZRN3, Length 406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-209ENST00000484487 FAM168BA1KXE4 195 aa4.11□□□□□ -1.75
PDZRN3-209ENST00000484487 EPM2AB3EWF7 344 aa4.11□□□□□ -1.75
PDZRN3-209ENST00000484487 IGKV2D-28P01615 120 aa4.11□□□□□ -1.75
PDZRN3-209ENST00000484487 PRR3P79522 188 aaKnown RBP4.11□□□□□ -1.75
PDZRN3-209ENST00000484487 C7orf33Q8WU49 177 aa4.11□□□□□ -1.75
PDZRN3-209ENST00000484487 PANO1I0J062 215 aa4.1□□□□□ -1.75
PDZRN3-209ENST00000484487 IGLV6-57P01721 117 aa4.1□□□□□ -1.75
PDZRN3-209ENST00000484487 RPL13AP40429 203 aaKnown RBP4.1□□□□□ -1.75
PDZRN3-209ENST00000484487 UBE2BP63146 152 aa4.1□□□□□ -1.75
PDZRN3-209ENST00000484487 Q1RN00 199 aa4.1□□□□□ -1.75
PDZRN3-209ENST00000484487 COL5A1-AS1Q5SY13 56 aa4.1□□□□□ -1.75
PDZRN3-209ENST00000484487 LINC00337Q8N6G1 96 aa4.1□□□□□ -1.75
PDZRN3-209ENST00000484487 Q8NDZ9 215 aa4.1□□□□□ -1.75
PDZRN3-209ENST00000484487 LINC00167Q96N53 147 aa4.1□□□□□ -1.75
PDZRN3-209ENST00000484487 SNHG12Q9BXW3 62 aa4.1□□□□□ -1.75
PDZRN3-209ENST00000484487 LRP1BQ9NZR2 4599 aa4.1□□□□□ -1.75
PDZRN3-209ENST00000484487 EPPK1P58107 5090 aaKnown RBP4.1□□□□□ -1.75
PDZRN3-209ENST00000484487 IGLV1-50A0A075B6I6 118 aa4.09□□□□□ -1.75
PDZRN3-209ENST00000484487 TRAV23DV6A0A075B6W5 121 aa4.09□□□□□ -1.75
PDZRN3-209ENST00000484487 TRBV10-3A0A0K0K1G6 114 aa4.09□□□□□ -1.75
PDZRN3-209ENST00000484487 GAGE10A6NGK3 116 aa4.09□□□□□ -1.75
PDZRN3-209ENST00000484487 PRYO14603 147 aa4.09□□□□□ -1.75
PDZRN3-209ENST00000484487 VAMP3Q15836 100 aa4.09□□□□□ -1.75
PDZRN3-209ENST00000484487 KRTAP7-1Q8IUC3 87 aa4.09□□□□□ -1.75
PDZRN3-209ENST00000484487 CIRBP-AS1Q8TBR5 109 aa4.09□□□□□ -1.75
PDZRN3-209ENST00000484487 KCNQ1DNQ9H478 68 aa4.09□□□□□ -1.75
PDZRN3-209ENST00000484487 FAM30AQ9NZY2 134 aa4.09□□□□□ -1.75
PDZRN3-209ENST00000484487 H7C2G1 150 aa4.08□□□□□ -1.76
PDZRN3-209ENST00000484487 K7ERJ3 54 aa4.08□□□□□ -1.76
PDZRN3-209ENST00000484487 COX6CP09669 75 aa4.08□□□□□ -1.76
PDZRN3-209ENST00000484487 RPL28P46779 137 aaKnown RBP4.08□□□□□ -1.76
PDZRN3-209ENST00000484487 PSMB2P49721 201 aa4.08□□□□□ -1.76
PDZRN3-209ENST00000484487 LYRM7Q5U5X0 104 aa4.08□□□□□ -1.76
PDZRN3-209ENST00000484487 SCXQ7RTU7 201 aa4.08□□□□□ -1.76
PDZRN3-209ENST00000484487 PHF5AQ7RTV0 110 aaKnown RBP4.08□□□□□ -1.76
PDZRN3-209ENST00000484487 TRBV7-6A0A0J9YX20 115 aa4.07□□□□□ -1.76
PDZRN3-209ENST00000484487 RPL37AP8A6NKH3 93 aa4.07□□□□□ -1.76
PDZRN3-209ENST00000484487 H0YGX0 51 aa4.07□□□□□ -1.76
PDZRN3-209ENST00000484487 SNCGO76070 127 aa4.07□□□□□ -1.76
PDZRN3-209ENST00000484487 REG3GQ6UW15 175 aa4.07□□□□□ -1.76
PDZRN3-209ENST00000484487 SMIM11BQ8TCY0 68 aa4.07□□□□□ -1.76
PDZRN3-209ENST00000484487 DIRC1Q969H9 104 aa4.07□□□□□ -1.76
PDZRN3-209ENST00000484487 APOBP04114 4563 aaKnown RBP4.07□□□□□ -1.76
PDZRN3-209ENST00000484487 ETDCA0A1B0GVM5 59 aa4.06□□□□□ -1.76
PDZRN3-209ENST00000484487 C9orf118A6NHY6 69 aa4.06□□□□□ -1.76
PDZRN3-209ENST00000484487 ZNF73O43830 326 aaPredicted RBP4.06□□□□□ -1.76
PDZRN3-209ENST00000484487 TSPAN13O95857 204 aa4.06□□□□□ -1.76
PDZRN3-209ENST00000484487 KRTAP4-5Q9BYR2 181 aa4.06□□□□□ -1.76
PDZRN3-209ENST00000484487 TAX1BP3O14907 124 aa4.05□□□□□ -1.76
PDZRN3-209ENST00000484487 CDK2AP2O75956 126 aa4.05□□□□□ -1.76
PDZRN3-209ENST00000484487 SCGB1C2P0DMR2 95 aa4.05□□□□□ -1.76
PDZRN3-209ENST00000484487 SPRR1AP35321 89 aa4.05□□□□□ -1.76
PDZRN3-209ENST00000484487 C6orf99Q4VX62 202 aa4.05□□□□□ -1.76
PDZRN3-209ENST00000484487 H0Y9J4 135 aa4.04□□□□□ -1.76
PDZRN3-209ENST00000484487 H3BUT2 72 aa4.04□□□□□ -1.76
PDZRN3-209ENST00000484487 SLC25A20O43772 301 aa4.04□□□□□ -1.76
PDZRN3-209ENST00000484487 BCE1O60756 84 aa4.04□□□□□ -1.76
PDZRN3-209ENST00000484487 INAFM2P0DMQ5 153 aa4.04□□□□□ -1.76
PDZRN3-209ENST00000484487 FABP2P12104 132 aa4.04□□□□□ -1.76
PDZRN3-209ENST00000484487 COX7BP24311 80 aa4.04□□□□□ -1.76
PDZRN3-209ENST00000484487 XGP55808 180 aa4.04□□□□□ -1.76
PDZRN3-209ENST00000484487 TRBV20-1A0A075B6N2 111 aa4.03□□□□□ -1.76
PDZRN3-209ENST00000484487 A0A1B0GX51 115 aa4.03□□□□□ -1.76
PDZRN3-209ENST00000484487 A0A1W2PPM0 123 aa4.03□□□□□ -1.76
PDZRN3-209ENST00000484487 TRIAP1O43715 76 aa4.03□□□□□ -1.76
PDZRN3-209ENST00000484487 UBE2AP49459 152 aa4.03□□□□□ -1.76
PDZRN3-209ENST00000484487 ELOF1P60002 83 aaKnown RBP4.03□□□□□ -1.76
PDZRN3-209ENST00000484487 C1orf137Q5JT78 98 aa4.03□□□□□ -1.76
PDZRN3-209ENST00000484487 FAM19A1Q7Z5A9 133 aa4.03□□□□□ -1.76
PDZRN3-209ENST00000484487 DHRS4-AS1Q9P1J3 65 aa4.03□□□□□ -1.76
PDZRN3-209ENST00000484487 PSORS1C2Q9UIG4 136 aa4.03□□□□□ -1.76
PDZRN3-209ENST00000484487 B5MCH6 92 aa4.02□□□□□ -1.77
PDZRN3-209ENST00000484487 KRTAP4-16G5E9R7 235 aaPredicted RBP4.02□□□□□ -1.77
PDZRN3-209ENST00000484487 HAMPP81172 84 aa4.02□□□□□ -1.77
PDZRN3-209ENST00000484487 Q6ZRX8 168 aa4.02□□□□□ -1.77
PDZRN3-209ENST00000484487 hADV29S1A0JD25 119 aa4.01□□□□□ -1.77
PDZRN3-209ENST00000484487 IGLV7-43P04211 117 aa4.01□□□□□ -1.77
PDZRN3-209ENST00000484487 RPL37AP61513 92 aaKnown RBP4.01□□□□□ -1.77
PDZRN3-209ENST00000484487 ATXN8Q156A1 80 aa4.01□□□□□ -1.77
PDZRN3-209ENST00000484487 LINC00575Q6W349 94 aa4.01□□□□□ -1.77
PDZRN3-209ENST00000484487 KRTAP11-1Q8IUC1 163 aa4.01□□□□□ -1.77
PDZRN3-209ENST00000484487 NAA38Q9BRA0 125 aaKnown RBP4.01□□□□□ -1.77
PDZRN3-209ENST00000484487 RYR1P21817 5038 aa4□□□□□ -1.77
PDZRN3-209ENST00000484487 H3BQ85 93 aa4□□□□□ -1.77
PDZRN3-209ENST00000484487 ZNF861PO60384 105 aa4□□□□□ -1.77
PDZRN3-209ENST00000484487 DNAL4O96015 105 aa4□□□□□ -1.77
PDZRN3-209ENST00000484487 TRACP01848 142 aa4□□□□□ -1.77
PDZRN3-209ENST00000484487 GTF2H5Q6ZYL4 71 aa4□□□□□ -1.77
PDZRN3-209ENST00000484487 VPS13BQ7Z7G8 4022 aa3.99□□□□□ -1.77
PDZRN3-209ENST00000484487 LST1O00453 97 aa3.99□□□□□ -1.77
PDZRN3-209ENST00000484487 SMR3BP02814 79 aaPredicted RBP3.99□□□□□ -1.77
PDZRN3-209ENST00000484487 PRLHP81277 87 aa3.99□□□□□ -1.77
PDZRN3-209ENST00000484487 OCIAD2Q56VL3 154 aa3.99□□□□□ -1.77
PDZRN3-209ENST00000484487 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.99□□□□□ -1.77
PDZRN3-209ENST00000484487 KRTAP13-1Q8IUC0 172 aa3.99□□□□□ -1.77
PDZRN3-209ENST00000484487 SMCR5Q8TEV8 140 aa3.99□□□□□ -1.77
PDZRN3-209ENST00000484487 CLEC2BQ92478 149 aa3.99□□□□□ -1.77
PDZRN3-209ENST00000484487 HIGD2AQ9BW72 106 aa3.99□□□□□ -1.77
PDZRN3-209ENST00000484487 ZNF706Q9Y5V0 76 aaPredicted RBP3.99□□□□□ -1.77
PDZRN3-209ENST00000484487 SPCS1Q9Y6A9 102 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 168.1 ms