RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 A0A1W2PNN7 141 aa8.84□□□□□ -0.99
SMAD9-204ENST00000483941 H0YGX0 51 aa8.84□□□□□ -0.99
SMAD9-204ENST00000483941 SMIM11BQ8TCY0 68 aa8.84□□□□□ -0.99
SMAD9-204ENST00000483941 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.84□□□□□ -0.99
SMAD9-204ENST00000483941 SRRM2Q9UQ35 2752 aaKnown RBP8.84□□□□□ -1
SMAD9-204ENST00000483941 IGLV1-50A0A075B6I6 118 aa8.83□□□□□ -1
SMAD9-204ENST00000483941 A0A087WYN8 130 aa8.83□□□□□ -1
SMAD9-204ENST00000483941 LINC00167Q96N53 147 aa8.83□□□□□ -1
SMAD9-204ENST00000483941 KCNQ1DNQ9H478 68 aa8.83□□□□□ -1
SMAD9-204ENST00000483941 PLAC8Q9NZF1 115 aa8.83□□□□□ -1
SMAD9-204ENST00000483941 UBR4Q5T4S7 5183 aa8.82□□□□□ -1
SMAD9-204ENST00000483941 TRBV20-1A0A075B6N2 111 aa8.82□□□□□ -1
SMAD9-204ENST00000483941 TRBV7-6A0A0J9YX20 115 aa8.82□□□□□ -1
SMAD9-204ENST00000483941 A0A1W2PPM0 123 aa8.82□□□□□ -1
SMAD9-204ENST00000483941 GAGE10A6NGK3 116 aa8.82□□□□□ -1
SMAD9-204ENST00000483941 PRYO14603 147 aa8.82□□□□□ -1
SMAD9-204ENST00000483941 FUSP35637 526 aaKnown RBP eCLIP8.82□□□□□ -1
SMAD9-204ENST00000483941 UBE2BP63146 152 aa8.82□□□□□ -1
SMAD9-204ENST00000483941 DIRC1Q969H9 104 aa8.82□□□□□ -1
SMAD9-204ENST00000483941 ZNF73O43830 326 aaPredicted RBP8.81□□□□□ -1
SMAD9-204ENST00000483941 FLG2Q5D862 2391 aaPredicted RBP8.8□□□□□ -1
SMAD9-204ENST00000483941 TRIAP1O43715 76 aa8.8□□□□□ -1
SMAD9-204ENST00000483941 Q6ZSA8 131 aa8.8□□□□□ -1
SMAD9-204ENST00000483941 KRTAP7-1Q8IUC3 87 aa8.8□□□□□ -1
SMAD9-204ENST00000483941 KRTAP10-1P60331 282 aa8.79□□□□□ -1
SMAD9-204ENST00000483941 Q5VSD8 79 aa8.79□□□□□ -1
SMAD9-204ENST00000483941 GTF2H5Q6ZYL4 71 aa8.79□□□□□ -1
SMAD9-204ENST00000483941 RPL37AP8A6NKH3 93 aa8.78□□□□□ -1
SMAD9-204ENST00000483941 PANO1I0J062 215 aa8.78□□□□□ -1
SMAD9-204ENST00000483941 C6orf99Q4VX62 202 aa8.78□□□□□ -1
SMAD9-204ENST00000483941 SLC25A20O43772 301 aa8.77□□□□□ -1.01
SMAD9-204ENST00000483941 ATXN8Q156A1 80 aa8.77□□□□□ -1.01
SMAD9-204ENST00000483941 REG3GQ6UW15 175 aa8.77□□□□□ -1.01
SMAD9-204ENST00000483941 PHF5AQ7RTV0 110 aaKnown RBP8.77□□□□□ -1.01
SMAD9-204ENST00000483941 NAA38Q9BRA0 125 aaKnown RBP8.77□□□□□ -1.01
SMAD9-204ENST00000483941 HMCN2Q8NDA2 5059 aa8.77□□□□□ -1.01
SMAD9-204ENST00000483941 ETDCA0A1B0GVM5 59 aa8.76□□□□□ -1.01
SMAD9-204ENST00000483941 A0A1B0GX51 115 aa8.76□□□□□ -1.01
SMAD9-204ENST00000483941 COX7BP24311 80 aa8.76□□□□□ -1.01
SMAD9-204ENST00000483941 SPCS1Q9Y6A9 102 aa8.76□□□□□ -1.01
SMAD9-204ENST00000483941 SPRR1AP35321 89 aa8.75□□□□□ -1.01
SMAD9-204ENST00000483941 GHRHP01286 108 aa8.74□□□□□ -1.01
SMAD9-204ENST00000483941 CIRBP-AS1Q8TBR5 109 aa8.74□□□□□ -1.01
SMAD9-204ENST00000483941 ELOF1P60002 83 aaKnown RBP8.73□□□□□ -1.01
SMAD9-204ENST00000483941 SCXQ7RTU7 201 aa8.73□□□□□ -1.01
SMAD9-204ENST00000483941 FAM30AQ9NZY2 134 aa8.73□□□□□ -1.01
SMAD9-204ENST00000483941 DHRS4-AS1Q9P1J3 65 aa8.73□□□□□ -1.01
SMAD9-204ENST00000483941 K7EP34 96 aa8.72□□□□□ -1.01
SMAD9-204ENST00000483941 DNAL4O96015 105 aa8.72□□□□□ -1.01
SMAD9-204ENST00000483941 XGP55808 180 aa8.72□□□□□ -1.01
SMAD9-204ENST00000483941 A0A1B0GV90 55 aa8.71□□□□□ -1.02
SMAD9-204ENST00000483941 H0Y9J4 135 aa8.71□□□□□ -1.02
SMAD9-204ENST00000483941 LST1O00453 97 aa8.71□□□□□ -1.02
SMAD9-204ENST00000483941 TRACP01848 142 aa8.71□□□□□ -1.02
SMAD9-204ENST00000483941 hADV29S1A0JD25 119 aa8.7□□□□□ -1.02
SMAD9-204ENST00000483941 H3BQ85 93 aa8.7□□□□□ -1.02
SMAD9-204ENST00000483941 J3QL48 77 aa8.7□□□□□ -1.02
SMAD9-204ENST00000483941 BCE1O60756 84 aa8.7□□□□□ -1.02
SMAD9-204ENST00000483941 TCL1BO95988 128 aa8.7□□□□□ -1.02
SMAD9-204ENST00000483941 LINC00575Q6W349 94 aa8.7□□□□□ -1.02
SMAD9-204ENST00000483941 Q6ZRX8 168 aa8.7□□□□□ -1.02
SMAD9-204ENST00000483941 DNAH8Q96JB1 4490 aa8.7□□□□□ -1.02
SMAD9-204ENST00000483941 B5MCH6 92 aa8.69□□□□□ -1.02
SMAD9-204ENST00000483941 KRTAP4-16G5E9R7 235 aaPredicted RBP8.69□□□□□ -1.02
SMAD9-204ENST00000483941 FAM19A1Q7Z5A9 133 aa8.69□□□□□ -1.02
SMAD9-204ENST00000483941 CLEC2BQ92478 149 aa8.69□□□□□ -1.02
SMAD9-204ENST00000483941 UBE2AP49459 152 aa8.68□□□□□ -1.02
SMAD9-204ENST00000483941 OCIAD2Q56VL3 154 aa8.68□□□□□ -1.02
SMAD9-204ENST00000483941 LINC00528Q8N1L1 170 aa8.68□□□□□ -1.02
SMAD9-204ENST00000483941 UBE2V1Q13404 147 aa8.67□□□□□ -1.02
SMAD9-204ENST00000483941 H3BMG7 143 aa8.66□□□□□ -1.02
SMAD9-204ENST00000483941 FAM229AH3BQW9 127 aa8.65□□□□□ -1.02
SMAD9-204ENST00000483941 SMR3BP02814 79 aaPredicted RBP8.65□□□□□ -1.02
SMAD9-204ENST00000483941 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.65□□□□□ -1.02
SMAD9-204ENST00000483941 PSORS1C2Q9UIG4 136 aa8.65□□□□□ -1.02
SMAD9-204ENST00000483941 C1orf137Q5JT78 98 aa8.64□□□□□ -1.03
SMAD9-204ENST00000483941 FAM218AQ96MZ4 157 aa8.64□□□□□ -1.03
SMAD9-204ENST00000483941 F8W1H4 67 aa8.63□□□□□ -1.03
SMAD9-204ENST00000483941 ORMDL1Q9P0S3 153 aa8.63□□□□□ -1.03
SMAD9-204ENST00000483941 C9JAW5 83 aa8.62□□□□□ -1.03
SMAD9-204ENST00000483941 KRTAP11-1Q8IUC1 163 aa8.62□□□□□ -1.03
SMAD9-204ENST00000483941 FAT3Q8TDW7 4589 aa8.62□□□□□ -1.03
SMAD9-204ENST00000483941 H3BT86 120 aa8.61□□□□□ -1.03
SMAD9-204ENST00000483941 TMEM256-PLSCR3K7ERE1 68 aa8.61□□□□□ -1.03
SMAD9-204ENST00000483941 ZNF861PO60384 105 aa8.61□□□□□ -1.03
SMAD9-204ENST00000483941 PPDPFLQ8WWR9 84 aa8.61□□□□□ -1.03
SMAD9-204ENST00000483941 LRP1Q07954 4544 aaKnown RBP8.61□□□□□ -1.03
SMAD9-204ENST00000483941 IGLV7-43P04211 117 aa8.6□□□□□ -1.03
SMAD9-204ENST00000483941 HAMPP81172 84 aa8.6□□□□□ -1.03
SMAD9-204ENST00000483941 PRLHP81277 87 aa8.6□□□□□ -1.03
SMAD9-204ENST00000483941 HIGD2AQ9BW72 106 aa8.6□□□□□ -1.03
SMAD9-204ENST00000483941 BAALC-AS2P0C853 105 aa8.59□□□□□ -1.03
SMAD9-204ENST00000483941 Q6ZQY7 126 aa8.59□□□□□ -1.03
SMAD9-204ENST00000483941 Q9BRP9 147 aa8.59□□□□□ -1.03
SMAD9-204ENST00000483941 ZNF706Q9Y5V0 76 aaPredicted RBP8.59□□□□□ -1.03
SMAD9-204ENST00000483941 KRTAP13-1Q8IUC0 172 aa8.58□□□□□ -1.04
SMAD9-204ENST00000483941 ANKRD29Q8N6D5 301 aa8.58□□□□□ -1.04
SMAD9-204ENST00000483941 SMCR5Q8TEV8 140 aa8.58□□□□□ -1.04
SMAD9-204ENST00000483941 PKHD1L1Q86WI1 4243 aa8.58□□□□□ -1.04
SMAD9-204ENST00000483941 KRTAP29-1A8MX34 341 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms