RNA–Protein interactions for RNA: ENST00000483684.1

COMMD3-213, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 722 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-213ENST00000483684 ZNF831Q5JPB2 1677 aa1.37□□□□□ -2.19
COMMD3-213ENST00000483684 LINC00575Q6W349 94 aa1.37□□□□□ -2.19
COMMD3-213ENST00000483684 PLAC4Q8WY50 150 aa1.37□□□□□ -2.19
COMMD3-213ENST00000483684 CDKN2A-AS1Q9UH64 79 aa1.37□□□□□ -2.19
COMMD3-213ENST00000483684 SDK1Q7Z5N4 2213 aa1.37□□□□□ -2.19
COMMD3-213ENST00000483684 POLR2KP53803 58 aaKnown RBP1.36□□□□□ -2.19
COMMD3-213ENST00000483684 SPINK13Q1W4C9 94 aa1.36□□□□□ -2.19
COMMD3-213ENST00000483684 C10orf99Q6UWK7 81 aa1.36□□□□□ -2.19
COMMD3-213ENST00000483684 BRWD1Q9NSI6 2320 aa1.36□□□□□ -2.19
COMMD3-213ENST00000483684 CRIPTQ9P021 101 aa1.36□□□□□ -2.19
COMMD3-213ENST00000483684 GOLGA4Q13439 2230 aaKnown RBP1.35□□□□□ -2.19
COMMD3-213ENST00000483684 SSC5DA1L4H1 1573 aa1.35□□□□□ -2.19
COMMD3-213ENST00000483684 H3BSH0 61 aa1.35□□□□□ -2.19
COMMD3-213ENST00000483684 PRB1P04280 392 aa1.35□□□□□ -2.19
COMMD3-213ENST00000483684 PRCDQ00LT1 54 aa1.35□□□□□ -2.19
COMMD3-213ENST00000483684 COX6B2Q6YFQ2 88 aa1.35□□□□□ -2.19
COMMD3-213ENST00000483684 ALPK2Q86TB3 2170 aa1.35□□□□□ -2.19
COMMD3-213ENST00000483684 LYNX1G3V0Z9 82 aa1.34□□□□□ -2.19
COMMD3-213ENST00000483684 MINOS1Q5TGZ0 78 aa1.34□□□□□ -2.19
COMMD3-213ENST00000483684 USMG5Q96IX5 58 aa1.34□□□□□ -2.19
COMMD3-213ENST00000483684 PLXNB2O15031 1838 aa1.33□□□□□ -2.2
COMMD3-213ENST00000483684 GVQW2A0A096LPI5 108 aaPredicted RBP1.33□□□□□ -2.2
COMMD3-213ENST00000483684 CCL22O00626 93 aa1.33□□□□□ -2.2
COMMD3-213ENST00000483684 PCOTHQ58A44 107 aa1.33□□□□□ -2.2
COMMD3-213ENST00000483684 UBE2DNLQ8IWF7 75 aa1.33□□□□□ -2.2
COMMD3-213ENST00000483684 FN1P02751 2386 aaKnown RBP1.33□□□□□ -2.2
COMMD3-213ENST00000483684 A0A096LNT2 108 aa1.32□□□□□ -2.2
COMMD3-213ENST00000483684 G3V318 75 aa1.32□□□□□ -2.2
COMMD3-213ENST00000483684 K7EQZ3 153 aa1.32□□□□□ -2.2
COMMD3-213ENST00000483684 RPL39P62891 51 aaKnown RBP1.32□□□□□ -2.2
COMMD3-213ENST00000483684 PRB3Q04118 309 aaPredicted RBP1.32□□□□□ -2.2
COMMD3-213ENST00000483684 PIGYQ3MUY2 71 aa1.32□□□□□ -2.2
COMMD3-213ENST00000483684 C6orf48Q9UBA6 75 aa1.32□□□□□ -2.2
COMMD3-213ENST00000483684 MED13LQ71F56 2210 aa1.31□□□□□ -2.2
COMMD3-213ENST00000483684 DEFB103AP81534 67 aa1.31□□□□□ -2.2
COMMD3-213ENST00000483684 SPINK9Q5DT21 86 aa1.31□□□□□ -2.2
COMMD3-213ENST00000483684 PRO3102Q9H379 93 aa1.31□□□□□ -2.2
COMMD3-213ENST00000483684 IGLV5-48A0A075B6I7 105 aa1.3□□□□□ -2.2
COMMD3-213ENST00000483684 RPS27P42677 84 aaKnown RBP1.3□□□□□ -2.2
COMMD3-213ENST00000483684 DEFB106AQ8N104 65 aa1.3□□□□□ -2.2
COMMD3-213ENST00000483684 RPL39LQ96EH5 51 aaKnown RBP1.3□□□□□ -2.2
COMMD3-213ENST00000483684 MRPL34Q9BQ48 92 aaKnown RBP1.3□□□□□ -2.2
COMMD3-213ENST00000483684 CACNA1GO43497 2377 aa1.3□□□□□ -2.2
COMMD3-213ENST00000483684 TENM1Q9UKZ4 2725 aa1.29□□□□□ -2.2
COMMD3-213ENST00000483684 KMT2BQ9UMN6 2715 aaPredicted RBP1.29□□□□□ -2.2
COMMD3-213ENST00000483684 DEFB131AP59861 70 aa1.29□□□□□ -2.2
COMMD3-213ENST00000483684 RTTNQ86VV8 2226 aa1.29□□□□□ -2.2
COMMD3-213ENST00000483684 M0QY20 66 aa1.28□□□□□ -2.2
COMMD3-213ENST00000483684 WFDC10BQ8IUB3 73 aa1.28□□□□□ -2.2
COMMD3-213ENST00000483684 WFDC13Q8IUB5 93 aa1.28□□□□□ -2.2
COMMD3-213ENST00000483684 TNRC6CQ9HCJ0 1690 aaKnown RBP1.28□□□□□ -2.2
COMMD3-213ENST00000483684 ICE1Q9Y2F5 2266 aa1.27□□□□□ -2.21
COMMD3-213ENST00000483684 KNTC1P50748 2209 aa1.27□□□□□ -2.21
COMMD3-213ENST00000483684 RPL37P61927 97 aaKnown RBP1.27□□□□□ -2.21
COMMD3-213ENST00000483684 TMEM167AQ8TBQ9 72 aa1.27□□□□□ -2.21
COMMD3-213ENST00000483684 F5P12259 2224 aa1.26□□□□□ -2.21
COMMD3-213ENST00000483684 H3BUA1 57 aa1.26□□□□□ -2.21
COMMD3-213ENST00000483684 LEAP2Q969E1 77 aa1.26□□□□□ -2.21
COMMD3-213ENST00000483684 I3L2K1 104 aa1.25□□□□□ -2.21
COMMD3-213ENST00000483684 KRTAP21-3Q3LHN1 58 aa1.25□□□□□ -2.21
COMMD3-213ENST00000483684 UNQ6190/PRO20217Q6UXQ8 127 aa1.25□□□□□ -2.21
COMMD3-213ENST00000483684 ZFHX3Q15911 3703 aa1.25□□□□□ -2.21
COMMD3-213ENST00000483684 K7EIM0 57 aa1.24□□□□□ -2.21
COMMD3-213ENST00000483684 DEFB123Q8N688 67 aa1.24□□□□□ -2.21
COMMD3-213ENST00000483684 TOMM7Q9P0U1 55 aa1.24□□□□□ -2.21
COMMD3-213ENST00000483684 KAAG1Q9UBP8 84 aa1.24□□□□□ -2.21
COMMD3-213ENST00000483684 PDE4DIPQ5VU43 2346 aa1.24□□□□□ -2.21
COMMD3-213ENST00000483684 URB1O60287 2271 aaKnown RBP1.24□□□□□ -2.21
COMMD3-213ENST00000483684 CACNA1CQ13936 2221 aa1.23□□□□□ -2.21
COMMD3-213ENST00000483684 COX6A2Q02221 97 aa1.23□□□□□ -2.21
COMMD3-213ENST00000483684 WT1-ASQ06250 92 aa1.23□□□□□ -2.21
COMMD3-213ENST00000483684 DEFB109BQ30KR1 87 aa1.23□□□□□ -2.21
COMMD3-213ENST00000483684 CADP27708 2225 aa1.23□□□□□ -2.21
COMMD3-213ENST00000483684 H0YAA0 97 aa1.22□□□□□ -2.21
COMMD3-213ENST00000483684 LYNX1P0DP58 116 aa1.22□□□□□ -2.21
COMMD3-213ENST00000483684 H1FX-AS1Q4G0G2 97 aa1.22□□□□□ -2.21
COMMD3-213ENST00000483684 RPL39P5Q59GN2 51 aa1.21□□□□□ -2.22
COMMD3-213ENST00000483684 Q6ZSA8 131 aa1.21□□□□□ -2.22
COMMD3-213ENST00000483684 AHNAK2Q8IVF2 5795 aa1.21□□□□□ -2.22
COMMD3-213ENST00000483684 CACNA1EQ15878 2313 aa1.21□□□□□ -2.22
COMMD3-213ENST00000483684 TECTAO75443 2155 aa1.2□□□□□ -2.22
COMMD3-213ENST00000483684 MMP24-AS1A0A0U1RRL7 71 aa1.2□□□□□ -2.22
COMMD3-213ENST00000483684 DEFB108AA8MXU0 73 aa1.2□□□□□ -2.22
COMMD3-213ENST00000483684 DEFB130BP0DP73 79 aa1.2□□□□□ -2.22
COMMD3-213ENST00000483684 DEFB130AP0DP74 79 aa1.2□□□□□ -2.22
COMMD3-213ENST00000483684 KRTAP5-10Q6L8G5 202 aa1.2□□□□□ -2.22
COMMD3-213ENST00000483684 ABCA1O95477 2261 aa1.2□□□□□ -2.22
COMMD3-213ENST00000483684 ASXL3Q9C0F0 2248 aa1.19□□□□□ -2.22
COMMD3-213ENST00000483684 AHCTF1Q8WYP5 2266 aa1.19□□□□□ -2.22
COMMD3-213ENST00000483684 WNK2Q9Y3S1 2297 aa1.19□□□□□ -2.22
COMMD3-213ENST00000483684 NOP10Q9NPE3 64 aaKnown RBP1.18□□□□□ -2.22
COMMD3-213ENST00000483684 ASCC3Q8N3C0 2202 aaKnown RBP1.17□□□□□ -2.22
COMMD3-213ENST00000483684 KNL1Q8NG31 2342 aa1.17□□□□□ -2.22
COMMD3-213ENST00000483684 DEFB105AQ8NG35 78 aa1.17□□□□□ -2.22
COMMD3-213ENST00000483684 PRO0255Q9UI72 69 aa1.17□□□□□ -2.22
COMMD3-213ENST00000483684 APLNQ9ULZ1 77 aa1.17□□□□□ -2.22
COMMD3-213ENST00000483684 ANKRD17O75179 2603 aaKnown RBP1.17□□□□□ -2.22
COMMD3-213ENST00000483684 CNOT1A5YKK6 2376 aaKnown RBP1.16□□□□□ -2.22
COMMD3-213ENST00000483684 A8MTW9 85 aa1.16□□□□□ -2.22
COMMD3-213ENST00000483684 K7EIL1 84 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms