RNA–Protein interactions for RNA: ENST00000483142.5

HDAC9-224, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 305 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-224ENST00000483142 GAGE10A6NGK3 116 aa2.83□□□□□ -1.96
HDAC9-224ENST00000483142 NCR3O14931 201 aa2.83□□□□□ -1.96
HDAC9-224ENST00000483142 FXYD2P54710 66 aa2.83□□□□□ -1.96
HDAC9-224ENST00000483142 PHF5AQ7RTV0 110 aaKnown RBP2.83□□□□□ -1.96
HDAC9-224ENST00000483142 CEND1Q8N111 149 aa2.83□□□□□ -1.96
HDAC9-224ENST00000483142 NKAPP1Q8N9T2 125 aa2.83□□□□□ -1.96
HDAC9-224ENST00000483142 LINC00167Q96N53 147 aa2.83□□□□□ -1.96
HDAC9-224ENST00000483142 HIST1H4GQ99525 98 aa2.83□□□□□ -1.96
HDAC9-224ENST00000483142 KRTAP9-9Q9BYP9 154 aa2.83□□□□□ -1.96
HDAC9-224ENST00000483142 KRTAP9-4Q9BYQ2 154 aa2.83□□□□□ -1.96
HDAC9-224ENST00000483142 PRO1933Q9H354 126 aa2.83□□□□□ -1.96
HDAC9-224ENST00000483142 CBY1Q9Y3M2 126 aa2.83□□□□□ -1.96
HDAC9-224ENST00000483142 ABCA13Q86UQ4 5058 aa2.83□□□□□ -1.96
HDAC9-224ENST00000483142 PKHD1L1Q86WI1 4243 aa2.82□□□□□ -1.96
HDAC9-224ENST00000483142 TRAV23DV6A0A075B6W5 121 aa2.82□□□□□ -1.96
HDAC9-224ENST00000483142 TRAV13-2A0A0B4J235 113 aa2.82□□□□□ -1.96
HDAC9-224ENST00000483142 TRBV10-3A0A0K0K1G6 114 aa2.82□□□□□ -1.96
HDAC9-224ENST00000483142 H0Y9J4 135 aa2.82□□□□□ -1.96
HDAC9-224ENST00000483142 M0R143 59 aa2.82□□□□□ -1.96
HDAC9-224ENST00000483142 DDTP30046 118 aa2.82□□□□□ -1.96
HDAC9-224ENST00000483142 PCP4P48539 62 aa2.82□□□□□ -1.96
HDAC9-224ENST00000483142 NPC2P61916 151 aa2.82□□□□□ -1.96
HDAC9-224ENST00000483142 HAMPP81172 84 aa2.82□□□□□ -1.96
HDAC9-224ENST00000483142 SRSF9Q13242 221 aaKnown RBP eCLIP2.82□□□□□ -1.96
HDAC9-224ENST00000483142 BVES-AS1Q5T3Y7 98 aa2.82□□□□□ -1.96
HDAC9-224ENST00000483142 LCE3BQ5TA77 95 aa2.82□□□□□ -1.96
HDAC9-224ENST00000483142 KRTAP17-1Q9BYP8 105 aa2.82□□□□□ -1.96
HDAC9-224ENST00000483142 TMEM126AQ9H061 195 aa2.82□□□□□ -1.96
HDAC9-224ENST00000483142 FAT1Q14517 4588 aa2.82□□□□□ -1.96
HDAC9-224ENST00000483142 VPS13BQ7Z7G8 4022 aa2.81□□□□□ -1.96
HDAC9-224ENST00000483142 TRBV7-6A0A0J9YX20 115 aa2.81□□□□□ -1.96
HDAC9-224ENST00000483142 BCE1O60756 84 aa2.81□□□□□ -1.96
HDAC9-224ENST00000483142 PSORS1C2Q9UIG4 136 aa2.81□□□□□ -1.96
HDAC9-224ENST00000483142 ZNF73O43830 326 aaPredicted RBP2.8□□□□□ -1.96
HDAC9-224ENST00000483142 CFC1BP0CG36 223 aa2.8□□□□□ -1.96
HDAC9-224ENST00000483142 CFC1P0CG37 223 aa2.8□□□□□ -1.96
HDAC9-224ENST00000483142 RPL13AP40429 203 aaKnown RBP2.8□□□□□ -1.96
HDAC9-224ENST00000483142 RPL28P46779 137 aaKnown RBP2.8□□□□□ -1.96
HDAC9-224ENST00000483142 ELOF1P60002 83 aaKnown RBP2.8□□□□□ -1.96
HDAC9-224ENST00000483142 RPL37AP61513 92 aaKnown RBP2.8□□□□□ -1.96
HDAC9-224ENST00000483142 UBE2BP63146 152 aa2.8□□□□□ -1.96
HDAC9-224ENST00000483142 CTAG1AP78358 180 aa2.8□□□□□ -1.96
HDAC9-224ENST00000483142 Q5VSD8 79 aa2.8□□□□□ -1.96
HDAC9-224ENST00000483142 REG3GQ6UW15 175 aa2.8□□□□□ -1.96
HDAC9-224ENST00000483142 Q6ZRX8 168 aa2.8□□□□□ -1.96
HDAC9-224ENST00000483142 DIRC1Q969H9 104 aa2.8□□□□□ -1.96
HDAC9-224ENST00000483142 PCLOQ9Y6V0 5065 aa2.79□□□□□ -1.96
HDAC9-224ENST00000483142 A0A0A0MQY5 61 aa2.79□□□□□ -1.96
HDAC9-224ENST00000483142 IGLV7-43P04211 117 aa2.79□□□□□ -1.96
HDAC9-224ENST00000483142 S100A7L2Q5SY68 101 aa2.79□□□□□ -1.96
HDAC9-224ENST00000483142 NHP2Q9NX24 153 aaKnown RBP2.79□□□□□ -1.96
HDAC9-224ENST00000483142 PRO1854Q9UHT4 67 aa2.79□□□□□ -1.96
HDAC9-224ENST00000483142 A6NDN8 102 aa2.78□□□□□ -1.96
HDAC9-224ENST00000483142 RPL37AP8A6NKH3 93 aa2.78□□□□□ -1.96
HDAC9-224ENST00000483142 K7ERJ3 54 aa2.78□□□□□ -1.96
HDAC9-224ENST00000483142 ZNF861PO60384 105 aa2.78□□□□□ -1.96
HDAC9-224ENST00000483142 TSPAN13O95857 204 aa2.78□□□□□ -1.96
HDAC9-224ENST00000483142 C6orf99Q4VX62 202 aa2.78□□□□□ -1.96
HDAC9-224ENST00000483142 C1orf137Q5JT78 98 aa2.78□□□□□ -1.96
HDAC9-224ENST00000483142 SPINK6Q6UWN8 80 aa2.78□□□□□ -1.96
HDAC9-224ENST00000483142 SMIM11BQ8TCY0 68 aa2.78□□□□□ -1.96
HDAC9-224ENST00000483142 SMCR5Q8TEV8 140 aa2.78□□□□□ -1.96
HDAC9-224ENST00000483142 RAB37Q96AX2 223 aa2.78□□□□□ -1.96
HDAC9-224ENST00000483142 ETDCA0A1B0GVM5 59 aa2.77□□□□□ -1.97
HDAC9-224ENST00000483142 A0A1B0GX51 115 aa2.77□□□□□ -1.97
HDAC9-224ENST00000483142 KRTAP1-4P0C5Y4 121 aa2.77□□□□□ -1.97
HDAC9-224ENST00000483142 SPRR1BP22528 89 aa2.77□□□□□ -1.97
HDAC9-224ENST00000483142 COX7BP24311 80 aa2.77□□□□□ -1.97
HDAC9-224ENST00000483142 HINT1P49773 126 aaPredicted RBP2.77□□□□□ -1.97
HDAC9-224ENST00000483142 PRLHP81277 87 aa2.77□□□□□ -1.97
HDAC9-224ENST00000483142 FAM19A1Q7Z5A9 133 aa2.77□□□□□ -1.97
HDAC9-224ENST00000483142 Q9BRP9 147 aa2.77□□□□□ -1.97
HDAC9-224ENST00000483142 SNHG12Q9BXW3 62 aa2.77□□□□□ -1.97
HDAC9-224ENST00000483142 KRTAP9-3Q9BYQ3 159 aa2.77□□□□□ -1.97
HDAC9-224ENST00000483142 IGLV5-48A0A075B6I7 105 aa2.76□□□□□ -1.97
HDAC9-224ENST00000483142 SMR3BP02814 79 aaPredicted RBP2.76□□□□□ -1.97
HDAC9-224ENST00000483142 INAFM2P0DMQ5 153 aa2.76□□□□□ -1.97
HDAC9-224ENST00000483142 UBE2AP49459 152 aa2.76□□□□□ -1.97
HDAC9-224ENST00000483142 LINC00483Q53H64 154 aa2.76□□□□□ -1.97
HDAC9-224ENST00000483142 OR13C6PQ8NH95 151 aa2.76□□□□□ -1.97
HDAC9-224ENST00000483142 DPH3Q96FX2 82 aa2.76□□□□□ -1.97
HDAC9-224ENST00000483142 DHRS4-AS1Q9P1J3 65 aa2.76□□□□□ -1.97
HDAC9-224ENST00000483142 H0YGX0 51 aa2.75□□□□□ -1.97
HDAC9-224ENST00000483142 TAX1BP3O14907 124 aa2.75□□□□□ -1.97
HDAC9-224ENST00000483142 LINC01547P58512 204 aaPredicted RBP2.75□□□□□ -1.97
HDAC9-224ENST00000483142 FAM229BQ4G0N7 80 aa2.75□□□□□ -1.97
HDAC9-224ENST00000483142 LINC00575Q6W349 94 aa2.75□□□□□ -1.97
HDAC9-224ENST00000483142 PPDPFLQ8WWR9 84 aa2.75□□□□□ -1.97
HDAC9-224ENST00000483142 SPRR4Q96PI1 79 aa2.75□□□□□ -1.97
HDAC9-224ENST00000483142 KRTAP4-5Q9BYR2 181 aa2.75□□□□□ -1.97
HDAC9-224ENST00000483142 ZNF706Q9Y5V0 76 aaPredicted RBP2.75□□□□□ -1.97
HDAC9-224ENST00000483142 FAT3Q8TDW7 4589 aa2.75□□□□□ -1.97
HDAC9-224ENST00000483142 LST1O00453 97 aa2.74□□□□□ -1.97
HDAC9-224ENST00000483142 ERC2-IT1O76042 136 aa2.74□□□□□ -1.97
HDAC9-224ENST00000483142 Q1RN00 199 aa2.74□□□□□ -1.97
HDAC9-224ENST00000483142 COL5A1-AS1Q5SY13 56 aa2.74□□□□□ -1.97
HDAC9-224ENST00000483142 LYRM7Q5U5X0 104 aa2.74□□□□□ -1.97
HDAC9-224ENST00000483142 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.74□□□□□ -1.97
HDAC9-224ENST00000483142 FAM218AQ96MZ4 157 aa2.74□□□□□ -1.97
HDAC9-224ENST00000483142 TRACP01848 142 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms