RNA–Protein interactions for RNA: ENST00000481502.5

SYNE1-225, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 3

Gene SYNE1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-225ENST00000481502 PRR3P79522 188 aaKnown RBP5.16□□□□□ -1.58
SYNE1-225ENST00000481502 OR13C6PQ8NH95 151 aa5.16□□□□□ -1.58
SYNE1-225ENST00000481502 H0YGX0 51 aa5.15□□□□□ -1.59
SYNE1-225ENST00000481502 NCR3O14931 201 aa5.15□□□□□ -1.59
SYNE1-225ENST00000481502 COX6CP09669 75 aa5.15□□□□□ -1.59
SYNE1-225ENST00000481502 VAMP3Q15836 100 aa5.15□□□□□ -1.59
SYNE1-225ENST00000481502 COL5A1-AS1Q5SY13 56 aa5.15□□□□□ -1.59
SYNE1-225ENST00000481502 PHF5AQ7RTV0 110 aaKnown RBP5.15□□□□□ -1.59
SYNE1-225ENST00000481502 KRTAP9-9Q9BYP9 154 aa5.15□□□□□ -1.59
SYNE1-225ENST00000481502 KRTAP9-4Q9BYQ2 154 aa5.15□□□□□ -1.59
SYNE1-225ENST00000481502 PCP4L1A6NKN8 68 aa5.14□□□□□ -1.59
SYNE1-225ENST00000481502 ZNF73O43830 326 aaPredicted RBP5.14□□□□□ -1.59
SYNE1-225ENST00000481502 INAFM2P0DMQ5 153 aa5.14□□□□□ -1.59
SYNE1-225ENST00000481502 RPL13AP40429 203 aaKnown RBP5.14□□□□□ -1.59
SYNE1-225ENST00000481502 REG3GQ6UW15 175 aa5.14□□□□□ -1.59
SYNE1-225ENST00000481502 SNHG12Q9BXW3 62 aa5.14□□□□□ -1.59
SYNE1-225ENST00000481502 A0A1B0GX51 115 aa5.13□□□□□ -1.59
SYNE1-225ENST00000481502 KRTAP4-16G5E9R7 235 aaPredicted RBP5.13□□□□□ -1.59
SYNE1-225ENST00000481502 SNCGO76070 127 aa5.13□□□□□ -1.59
SYNE1-225ENST00000481502 LYRM7Q5U5X0 104 aa5.13□□□□□ -1.59
SYNE1-225ENST00000481502 DIRC1Q969H9 104 aa5.13□□□□□ -1.59
SYNE1-225ENST00000481502 DNAH8Q96JB1 4490 aa5.13□□□□□ -1.59
SYNE1-225ENST00000481502 KRTAP4-8A0A0G2JLE6 195 aa5.12□□□□□ -1.59
SYNE1-225ENST00000481502 GAGE10A6NGK3 116 aa5.12□□□□□ -1.59
SYNE1-225ENST00000481502 RPL37AP8A6NKH3 93 aa5.12□□□□□ -1.59
SYNE1-225ENST00000481502 BCE1O60756 84 aa5.12□□□□□ -1.59
SYNE1-225ENST00000481502 SMIM11BQ8TCY0 68 aa5.12□□□□□ -1.59
SYNE1-225ENST00000481502 PKHD1P08F94 4074 aa5.12□□□□□ -1.59
SYNE1-225ENST00000481502 LRP1BQ9NZR2 4599 aa5.12□□□□□ -1.59
SYNE1-225ENST00000481502 ETDCA0A1B0GVM5 59 aa5.11□□□□□ -1.59
SYNE1-225ENST00000481502 TSPAN13O95857 204 aa5.11□□□□□ -1.59
SYNE1-225ENST00000481502 ELOF1P60002 83 aaKnown RBP5.11□□□□□ -1.59
SYNE1-225ENST00000481502 BATFQ16520 125 aa5.11□□□□□ -1.59
SYNE1-225ENST00000481502 Q1RN00 199 aa5.11□□□□□ -1.59
SYNE1-225ENST00000481502 C6orf99Q4VX62 202 aa5.11□□□□□ -1.59
SYNE1-225ENST00000481502 DHRS4-AS1Q9P1J3 65 aa5.11□□□□□ -1.59
SYNE1-225ENST00000481502 PSORS1C2Q9UIG4 136 aa5.11□□□□□ -1.59
SYNE1-225ENST00000481502 DYNC1H1Q14204 4646 aaKnown RBP5.11□□□□□ -1.59
SYNE1-225ENST00000481502 C9orf118A6NHY6 69 aa5.1□□□□□ -1.59
SYNE1-225ENST00000481502 COX7BP24311 80 aa5.1□□□□□ -1.59
SYNE1-225ENST00000481502 Q6ZRX8 168 aa5.1□□□□□ -1.59
SYNE1-225ENST00000481502 TRBV20-1A0A075B6N2 111 aa5.09□□□□□ -1.59
SYNE1-225ENST00000481502 B5MCH6 92 aa5.09□□□□□ -1.59
SYNE1-225ENST00000481502 H3BQ85 93 aa5.09□□□□□ -1.59
SYNE1-225ENST00000481502 K7ERJ3 54 aa5.09□□□□□ -1.59
SYNE1-225ENST00000481502 TAX1BP3O14907 124 aa5.09□□□□□ -1.59
SYNE1-225ENST00000481502 SLC25A20O43772 301 aa5.09□□□□□ -1.59
SYNE1-225ENST00000481502 ZNF861PO60384 105 aa5.09□□□□□ -1.59
SYNE1-225ENST00000481502 PLA2G1BP04054 148 aaKnown RBP5.09□□□□□ -1.59
SYNE1-225ENST00000481502 IGLV7-43P04211 117 aa5.09□□□□□ -1.59
SYNE1-225ENST00000481502 PSMB2P49721 201 aa5.09□□□□□ -1.59
SYNE1-225ENST00000481502 TRIAP1O43715 76 aa5.08□□□□□ -1.6
SYNE1-225ENST00000481502 UBE2AP49459 152 aa5.08□□□□□ -1.6
SYNE1-225ENST00000481502 RPL37AP61513 92 aaKnown RBP5.08□□□□□ -1.6
SYNE1-225ENST00000481502 OCIAD2Q56VL3 154 aa5.08□□□□□ -1.6
SYNE1-225ENST00000481502 C1orf137Q5JT78 98 aa5.08□□□□□ -1.6
SYNE1-225ENST00000481502 KRTAP13-1Q8IUC0 172 aa5.08□□□□□ -1.6
SYNE1-225ENST00000481502 KRTAP11-1Q8IUC1 163 aa5.08□□□□□ -1.6
SYNE1-225ENST00000481502 H7C2G1 150 aa5.07□□□□□ -1.6
SYNE1-225ENST00000481502 SCGB1C2P0DMR2 95 aa5.07□□□□□ -1.6
SYNE1-225ENST00000481502 LINC00575Q6W349 94 aa5.07□□□□□ -1.6
SYNE1-225ENST00000481502 FAM19A1Q7Z5A9 133 aa5.07□□□□□ -1.6
SYNE1-225ENST00000481502 TRACP01848 142 aa5.06□□□□□ -1.6
SYNE1-225ENST00000481502 FABP2P12104 132 aa5.06□□□□□ -1.6
SYNE1-225ENST00000481502 SPINK6Q6UWN8 80 aa5.06□□□□□ -1.6
SYNE1-225ENST00000481502 Q8N1X5 172 aa5.06□□□□□ -1.6
SYNE1-225ENST00000481502 PPDPFLQ8WWR9 84 aa5.06□□□□□ -1.6
SYNE1-225ENST00000481502 A0A1W2PPM0 123 aa5.05□□□□□ -1.6
SYNE1-225ENST00000481502 hADV29S1A0JD25 119 aa5.05□□□□□ -1.6
SYNE1-225ENST00000481502 H3BUT2 72 aa5.05□□□□□ -1.6
SYNE1-225ENST00000481502 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.05□□□□□ -1.6
SYNE1-225ENST00000481502 ZNF706Q9Y5V0 76 aaPredicted RBP5.05□□□□□ -1.6
SYNE1-225ENST00000481502 LST1O00453 97 aa5.04□□□□□ -1.6
SYNE1-225ENST00000481502 ATXN8Q156A1 80 aa5.04□□□□□ -1.6
SYNE1-225ENST00000481502 SMCR5Q8TEV8 140 aa5.04□□□□□ -1.6
SYNE1-225ENST00000481502 DNAL4O96015 105 aa5.03□□□□□ -1.6
SYNE1-225ENST00000481502 SMR3BP02814 79 aaPredicted RBP5.03□□□□□ -1.6
SYNE1-225ENST00000481502 KRTAP10-4P60372 401 aaPredicted RBP5.03□□□□□ -1.6
SYNE1-225ENST00000481502 HAMPP81172 84 aa5.03□□□□□ -1.6
SYNE1-225ENST00000481502 Q9BRP9 147 aa5.03□□□□□ -1.6
SYNE1-225ENST00000481502 APOBP04114 4563 aaKnown RBP5.02□□□□□ -1.61
SYNE1-225ENST00000481502 IGLV5-48A0A075B6I7 105 aa5.02□□□□□ -1.61
SYNE1-225ENST00000481502 SPRR1BP22528 89 aa5.02□□□□□ -1.61
SYNE1-225ENST00000481502 PRLHP81277 87 aa5.02□□□□□ -1.61
SYNE1-225ENST00000481502 HIGD2AQ9BW72 106 aa5.02□□□□□ -1.61
SYNE1-225ENST00000481502 EPPK1P58107 5090 aaKnown RBP5.01□□□□□ -1.61
SYNE1-225ENST00000481502 TMEM256-PLSCR3K7ERE1 68 aa5.01□□□□□ -1.61
SYNE1-225ENST00000481502 Q5VSD8 79 aa5.01□□□□□ -1.61
SYNE1-225ENST00000481502 GTF2H5Q6ZYL4 71 aa5.01□□□□□ -1.61
SYNE1-225ENST00000481502 TEX49A0A1B0GTD5 131 aa5□□□□□ -1.61
SYNE1-225ENST00000481502 TCL1BO95988 128 aa5□□□□□ -1.61
SYNE1-225ENST00000481502 FAM229BQ4G0N7 80 aa5□□□□□ -1.61
SYNE1-225ENST00000481502 LINC00483Q53H64 154 aa5□□□□□ -1.61
SYNE1-225ENST00000481502 KRTAP19-1Q8IUB9 90 aa5□□□□□ -1.61
SYNE1-225ENST00000481502 FAM218AQ96MZ4 157 aa5□□□□□ -1.61
SYNE1-225ENST00000481502 RYR1P21817 5038 aa5□□□□□ -1.61
SYNE1-225ENST00000481502 Q6ZQY7 126 aa4.99□□□□□ -1.61
SYNE1-225ENST00000481502 CLEC2BQ92478 149 aa4.99□□□□□ -1.61
SYNE1-225ENST00000481502 LINC01600Q96MT4 127 aa4.99□□□□□ -1.61
SYNE1-225ENST00000481502 SPRR4Q96PI1 79 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 224.3 ms