RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 TRBV7-4A0A0J9YYF1 115 aa7.78□□□□□ -1.16
TRIM27-205ENST00000481474 COL27A1Q8IZC6 1860 aaPredicted RBP7.78□□□□□ -1.16
TRIM27-205ENST00000481474 H3BS24 57 aa7.78□□□□□ -1.16
TRIM27-205ENST00000481474 Q6ZRX8 168 aa7.78□□□□□ -1.16
TRIM27-205ENST00000481474 BPTFQ12830 3046 aa7.78□□□□□ -1.16
TRIM27-205ENST00000481474 UQCR11O14957 56 aa7.78□□□□□ -1.16
TRIM27-205ENST00000481474 CDC42SE1Q9NRR8 79 aa7.78□□□□□ -1.16
TRIM27-205ENST00000481474 LAMA3Q16787 3333 aa7.77□□□□□ -1.17
TRIM27-205ENST00000481474 KRTAP10-11P60412 298 aa7.77□□□□□ -1.17
TRIM27-205ENST00000481474 PRR26Q8N8Z3 221 aa7.77□□□□□ -1.17
TRIM27-205ENST00000481474 ERC2-IT1O76042 136 aa7.75□□□□□ -1.17
TRIM27-205ENST00000481474 CHD8Q9HCK8 2581 aa7.74□□□□□ -1.17
TRIM27-205ENST00000481474 PRO3102Q9H379 93 aa7.74□□□□□ -1.17
TRIM27-205ENST00000481474 PRUNE2Q8WUY3 3088 aa7.73□□□□□ -1.17
TRIM27-205ENST00000481474 FAM218AQ96MZ4 157 aa7.72□□□□□ -1.17
TRIM27-205ENST00000481474 LITAFQ99732 161 aa7.72□□□□□ -1.17
TRIM27-205ENST00000481474 A0A087WTM6 91 aa7.72□□□□□ -1.17
TRIM27-205ENST00000481474 AMELXQ99217 191 aa7.72□□□□□ -1.17
TRIM27-205ENST00000481474 FASNP49327 2511 aaKnown RBP7.71□□□□□ -1.17
TRIM27-205ENST00000481474 LOC101927531A0A1B0GV80 90 aa7.7□□□□□ -1.18
TRIM27-205ENST00000481474 A8MWP4 228 aa7.7□□□□□ -1.18
TRIM27-205ENST00000481474 ZNF861PO60384 105 aa7.7□□□□□ -1.18
TRIM27-205ENST00000481474 ELOF1P60002 83 aaKnown RBP7.7□□□□□ -1.18
TRIM27-205ENST00000481474 LTBP2Q14767 1821 aa7.7□□□□□ -1.18
TRIM27-205ENST00000481474 KTN1-AS1Q86SY8 53 aa7.69□□□□□ -1.18
TRIM27-205ENST00000481474 CDH23Q9H251 3354 aa7.69□□□□□ -1.18
TRIM27-205ENST00000481474 URB1-AS1Q96HZ7 61 aa7.69□□□□□ -1.18
TRIM27-205ENST00000481474 CR1P17927 2039 aa7.68□□□□□ -1.18
TRIM27-205ENST00000481474 RPS28P62857 69 aaKnown RBP7.68□□□□□ -1.18
TRIM27-205ENST00000481474 C11orf72Q8NBR9 251 aa7.68□□□□□ -1.18
TRIM27-205ENST00000481474 Q8NAQ8 132 aa7.68□□□□□ -1.18
TRIM27-205ENST00000481474 USP9YO00507 2555 aaPredicted RBP7.67□□□□□ -1.18
TRIM27-205ENST00000481474 LCA10Q71F78 164 aa7.66□□□□□ -1.18
TRIM27-205ENST00000481474 ANKRD17O75179 2603 aaKnown RBP7.65□□□□□ -1.18
TRIM27-205ENST00000481474 H1FX-AS1Q4G0G2 97 aa7.65□□□□□ -1.18
TRIM27-205ENST00000481474 CD164Q04900 197 aa7.65□□□□□ -1.18
TRIM27-205ENST00000481474 IGLV7-43P04211 117 aa7.65□□□□□ -1.19
TRIM27-205ENST00000481474 TNP2Q05952 138 aa7.64□□□□□ -1.19
TRIM27-205ENST00000481474 IGFL1Q6UW32 110 aa7.63□□□□□ -1.19
TRIM27-205ENST00000481474 LINC00310P59036 64 aa7.62□□□□□ -1.19
TRIM27-205ENST00000481474 LAMA2P24043 3122 aaKnown RBP7.62□□□□□ -1.19
TRIM27-205ENST00000481474 A0A1B0GVX0 72 aa7.61□□□□□ -1.19
TRIM27-205ENST00000481474 FAM104AQ969W3 186 aa7.6□□□□□ -1.19
TRIM27-205ENST00000481474 EPG5Q9HCE0 2579 aa7.59□□□□□ -1.19
TRIM27-205ENST00000481474 CELSR3Q9NYQ7 3312 aa7.59□□□□□ -1.19
TRIM27-205ENST00000481474 PRRC2CQ9Y520 2896 aaKnown RBP7.59□□□□□ -1.19
TRIM27-205ENST00000481474 SMCPP49901 116 aaPredicted RBP7.59□□□□□ -1.19
TRIM27-205ENST00000481474 CRIP3Q6Q6R5 217 aa7.59□□□□□ -1.19
TRIM27-205ENST00000481474 GVQW2A0A096LPI5 108 aaPredicted RBP7.58□□□□□ -1.2
TRIM27-205ENST00000481474 CASC10Q5T4H9 136 aa7.58□□□□□ -1.2
TRIM27-205ENST00000481474 PCSK5Q92824 1860 aa7.57□□□□□ -1.2
TRIM27-205ENST00000481474 LINC00612Q8N6U2 182 aa7.57□□□□□ -1.2
TRIM27-205ENST00000481474 PRR15Q8IV56 129 aa7.57□□□□□ -1.2
TRIM27-205ENST00000481474 S4R3F8 94 aa7.57□□□□□ -1.2
TRIM27-205ENST00000481474 R4GN34 69 aa7.56□□□□□ -1.2
TRIM27-205ENST00000481474 HRES1P13985 223 aa7.56□□□□□ -1.2
TRIM27-205ENST00000481474 PRAC1Q96KF2 57 aa7.55□□□□□ -1.2
TRIM27-205ENST00000481474 H3BNG1 76 aa7.53□□□□□ -1.2
TRIM27-205ENST00000481474 CNFNQ9BYD5 112 aa7.53□□□□□ -1.2
TRIM27-205ENST00000481474 CYP4F30PQ9H0H9 118 aa7.53□□□□□ -1.2
TRIM27-205ENST00000481474 A0A096LNJ9 63 aa7.52□□□□□ -1.21
TRIM27-205ENST00000481474 A0A0A0MQY5 61 aa7.52□□□□□ -1.21
TRIM27-205ENST00000481474 UNC80Q8N2C7 3258 aa7.52□□□□□ -1.21
TRIM27-205ENST00000481474 RANBP2P49792 3224 aaKnown RBP7.51□□□□□ -1.21
TRIM27-205ENST00000481474 ANKRD11Q6UB99 2663 aaPredicted RBP7.51□□□□□ -1.21
TRIM27-205ENST00000481474 C9orf163Q8N9P6 203 aa7.51□□□□□ -1.21
TRIM27-205ENST00000481474 H3BPC8 53 aa7.5□□□□□ -1.21
TRIM27-205ENST00000481474 SPINK7P58062 85 aa7.5□□□□□ -1.21
TRIM27-205ENST00000481474 CFAP54Q96N23 3096 aa7.5□□□□□ -1.21
TRIM27-205ENST00000481474 SZT2Q5T011 3432 aa7.49□□□□□ -1.21
TRIM27-205ENST00000481474 Q1T7F1 81 aa7.49□□□□□ -1.21
TRIM27-205ENST00000481474 MGAM2Q2M2H8 2515 aa7.49□□□□□ -1.21
TRIM27-205ENST00000481474 CSAG1Q6PB30 78 aa7.48□□□□□ -1.21
TRIM27-205ENST00000481474 KRTAP10-3P60369 221 aa7.47□□□□□ -1.21
TRIM27-205ENST00000481474 DNAH14Q0VDD8 3507 aa7.44□□□□□ -1.22
TRIM27-205ENST00000481474 A0A1B0GU33 70 aa7.42□□□□□ -1.22
TRIM27-205ENST00000481474 Q8N377 158 aa7.42□□□□□ -1.22
TRIM27-205ENST00000481474 CEP295Q9C0D2 2601 aa7.42□□□□□ -1.22
TRIM27-205ENST00000481474 LOC110117498A0A087WWA1 95 aa7.42□□□□□ -1.22
TRIM27-205ENST00000481474 FREM2Q5SZK8 3169 aa7.41□□□□□ -1.22
TRIM27-205ENST00000481474 M0QZ58 72 aa7.41□□□□□ -1.22
TRIM27-205ENST00000481474 SPRR4Q96PI1 79 aa7.41□□□□□ -1.22
TRIM27-205ENST00000481474 HECTD1Q9ULT8 2610 aa7.4□□□□□ -1.22
TRIM27-205ENST00000481474 SEC61BP60468 96 aaKnown RBP7.4□□□□□ -1.23
TRIM27-205ENST00000481474 ATRQ13535 2644 aa7.4□□□□□ -1.23
TRIM27-205ENST00000481474 VCANP13611 3396 aa7.39□□□□□ -1.23
TRIM27-205ENST00000481474 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.36□□□□□ -1.23
TRIM27-205ENST00000481474 KCNQ1DNQ9H478 68 aa7.35□□□□□ -1.23
TRIM27-205ENST00000481474 PRO0461Q9UI25 63 aa7.35□□□□□ -1.23
TRIM27-205ENST00000481474 VPS13AQ96RL7 3174 aa7.35□□□□□ -1.23
TRIM27-205ENST00000481474 KLKP1Q107X0 134 aa7.33□□□□□ -1.24
TRIM27-205ENST00000481474 C10orf142B7Z368 130 aa7.32□□□□□ -1.24
TRIM27-205ENST00000481474 TRIOO75962 3097 aa7.32□□□□□ -1.24
TRIM27-205ENST00000481474 H7BZZ5 65 aa7.31□□□□□ -1.24
TRIM27-205ENST00000481474 C19orf73Q9NVV2 129 aa7.31□□□□□ -1.24
TRIM27-205ENST00000481474 MAST4O15021 2626 aa7.3□□□□□ -1.24
TRIM27-205ENST00000481474 MUC22E2RYF6 1773 aaPredicted RBP7.3□□□□□ -1.24
TRIM27-205ENST00000481474 FLNBO75369 2602 aaKnown RBP7.3□□□□□ -1.24
TRIM27-205ENST00000481474 KLK9Q2XQG4 91 aa7.29□□□□□ -1.24
TRIM27-205ENST00000481474 WDFY4Q6ZS81 3184 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms