RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 CFAP46Q8IYW2 2715 aa6.32□□□□□ -1.4
GARNL3-216ENST00000481242 LINC00313P59037 77 aa6.32□□□□□ -1.4
GARNL3-216ENST00000481242 KRTAP1-1Q07627 177 aa6.32□□□□□ -1.4
GARNL3-216ENST00000481242 SSBP3-AS1Q7Z2R9 100 aa6.32□□□□□ -1.4
GARNL3-216ENST00000481242 GIG44P09565 113 aaPredicted RBP6.31□□□□□ -1.4
GARNL3-216ENST00000481242 J3QL48 77 aa6.31□□□□□ -1.4
GARNL3-216ENST00000481242 Q6ZQT0 140 aa6.31□□□□□ -1.4
GARNL3-216ENST00000481242 C9orf163Q8N9P6 203 aa6.31□□□□□ -1.4
GARNL3-216ENST00000481242 TLX1NBP0CAT3 122 aa6.3□□□□□ -1.4
GARNL3-216ENST00000481242 RBM12B-AS1Q9P1G2 102 aa6.3□□□□□ -1.4
GARNL3-216ENST00000481242 IGLV1-50A0A075B6I6 118 aa6.3□□□□□ -1.4
GARNL3-216ENST00000481242 CHTF8P0CG12 524 aa6.3□□□□□ -1.4
GARNL3-216ENST00000481242 KRTAP10-3P60369 221 aa6.3□□□□□ -1.4
GARNL3-216ENST00000481242 A0A087WTM6 91 aa6.3□□□□□ -1.4
GARNL3-216ENST00000481242 PLA2G2DQ9UNK4 145 aa6.29□□□□□ -1.4
GARNL3-216ENST00000481242 A8MUN3 132 aa6.29□□□□□ -1.4
GARNL3-216ENST00000481242 SPINK1P00995 79 aa6.29□□□□□ -1.4
GARNL3-216ENST00000481242 ACYP2P14621 99 aa6.29□□□□□ -1.4
GARNL3-216ENST00000481242 DNAH12Q6ZR08 3092 aa6.29□□□□□ -1.4
GARNL3-216ENST00000481242 TRAV22A0A0B4J277 110 aa6.28□□□□□ -1.4
GARNL3-216ENST00000481242 STAB1Q9NY15 2570 aa6.28□□□□□ -1.4
GARNL3-216ENST00000481242 ZNF861PO60384 105 aa6.28□□□□□ -1.4
GARNL3-216ENST00000481242 SMIM29Q86T20 159 aa6.28□□□□□ -1.4
GARNL3-216ENST00000481242 LOC101927531A0A1B0GV80 90 aa6.27□□□□□ -1.41
GARNL3-216ENST00000481242 ST20-AS1Q8NBB2 130 aa6.27□□□□□ -1.41
GARNL3-216ENST00000481242 H3BS24 57 aa6.26□□□□□ -1.41
GARNL3-216ENST00000481242 LINC00528Q8N1L1 170 aa6.26□□□□□ -1.41
GARNL3-216ENST00000481242 C15orf56Q8N910 161 aa6.26□□□□□ -1.41
GARNL3-216ENST00000481242 APLNQ9ULZ1 77 aa6.25□□□□□ -1.41
GARNL3-216ENST00000481242 CDC42SE1Q9NRR8 79 aa6.25□□□□□ -1.41
GARNL3-216ENST00000481242 CNBPP62633 177 aaKnown RBP6.25□□□□□ -1.41
GARNL3-216ENST00000481242 CENPEQ02224 2701 aa6.24□□□□□ -1.41
GARNL3-216ENST00000481242 A8MWP4 228 aa6.24□□□□□ -1.41
GARNL3-216ENST00000481242 ZNF575Q86XF7 245 aa6.24□□□□□ -1.41
GARNL3-216ENST00000481242 BPTFQ12830 3046 aa6.23□□□□□ -1.41
GARNL3-216ENST00000481242 LINC00304Q8N9R0 145 aa6.23□□□□□ -1.41
GARNL3-216ENST00000481242 SETXQ7Z333 2677 aaKnown RBP6.22□□□□□ -1.41
GARNL3-216ENST00000481242 OBSCN-AS1Q96MR7 158 aa6.22□□□□□ -1.41
GARNL3-216ENST00000481242 FAM168BA1KXE4 195 aa6.22□□□□□ -1.41
GARNL3-216ENST00000481242 Q96NJ1 140 aa6.21□□□□□ -1.42
GARNL3-216ENST00000481242 FP248Q71RG6 208 aaPredicted RBP6.21□□□□□ -1.42
GARNL3-216ENST00000481242 SPANXA2-OT1Q8N9U9 137 aa6.21□□□□□ -1.42
GARNL3-216ENST00000481242 MRPL34Q9BQ48 92 aaKnown RBP6.21□□□□□ -1.42
GARNL3-216ENST00000481242 CEP350Q5VT06 3117 aa6.2□□□□□ -1.42
GARNL3-216ENST00000481242 A0A1B0GU69 56 aa6.19□□□□□ -1.42
GARNL3-216ENST00000481242 IGLV7-43P04211 117 aa6.18□□□□□ -1.42
GARNL3-216ENST00000481242 C9orf129Q5T035 196 aaKnown RBP6.18□□□□□ -1.42
GARNL3-216ENST00000481242 EIF4EBP3O60516 100 aaPredicted RBP6.17□□□□□ -1.42
GARNL3-216ENST00000481242 LINC01554Q52M75 96 aa6.16□□□□□ -1.42
GARNL3-216ENST00000481242 IGFL1Q6UW32 110 aa6.16□□□□□ -1.42
GARNL3-216ENST00000481242 TEP1Q99973 2627 aaKnown RBP6.16□□□□□ -1.42
GARNL3-216ENST00000481242 ZNF292O60281 2723 aa6.15□□□□□ -1.42
GARNL3-216ENST00000481242 IGLV5-37A0A075B6J1 123 aa6.15□□□□□ -1.43
GARNL3-216ENST00000481242 UTRNP46939 3433 aa6.14□□□□□ -1.43
GARNL3-216ENST00000481242 Q75L30 129 aa6.14□□□□□ -1.43
GARNL3-216ENST00000481242 PSORS1C2Q9UIG4 136 aa6.14□□□□□ -1.43
GARNL3-216ENST00000481242 CHD7Q9P2D1 2997 aa6.14□□□□□ -1.43
GARNL3-216ENST00000481242 Q8N377 158 aa6.14□□□□□ -1.43
GARNL3-216ENST00000481242 COA5Q86WW8 74 aa6.13□□□□□ -1.43
GARNL3-216ENST00000481242 COX6B2Q6YFQ2 88 aa6.13□□□□□ -1.43
GARNL3-216ENST00000481242 C8orf17Q9NRJ1 99 aa6.13□□□□□ -1.43
GARNL3-216ENST00000481242 A0A1B0GVX0 72 aa6.13□□□□□ -1.43
GARNL3-216ENST00000481242 ASB16-AS1Q495Z4 193 aa6.13□□□□□ -1.43
GARNL3-216ENST00000481242 SPRR4Q96PI1 79 aa6.13□□□□□ -1.43
GARNL3-216ENST00000481242 OXTP01178 125 aa6.12□□□□□ -1.43
GARNL3-216ENST00000481242 COL6A5A8TX70 2615 aa6.12□□□□□ -1.43
GARNL3-216ENST00000481242 K7EQZ3 153 aa6.11□□□□□ -1.43
GARNL3-216ENST00000481242 A0A1W2PNN7 141 aa6.1□□□□□ -1.43
GARNL3-216ENST00000481242 UQCR11O14957 56 aa6.1□□□□□ -1.43
GARNL3-216ENST00000481242 SMR3BP02814 79 aaPredicted RBP6.1□□□□□ -1.43
GARNL3-216ENST00000481242 CHD9Q3L8U1 2897 aa6.08□□□□□ -1.44
GARNL3-216ENST00000481242 UNC79Q9P2D8 2635 aa6.08□□□□□ -1.44
GARNL3-216ENST00000481242 OCR1Q9BZK8 76 aa6.08□□□□□ -1.44
GARNL3-216ENST00000481242 TEX15Q9BXT5 2789 aa6.07□□□□□ -1.44
GARNL3-216ENST00000481242 CASC10Q5T4H9 136 aa6.07□□□□□ -1.44
GARNL3-216ENST00000481242 AKAP13Q12802 2813 aa6.06□□□□□ -1.44
GARNL3-216ENST00000481242 CYSTM1Q9H1C7 97 aa6.06□□□□□ -1.44
GARNL3-216ENST00000481242 DSCR10P59022 87 aa6.06□□□□□ -1.44
GARNL3-216ENST00000481242 TNP2Q05952 138 aa6.05□□□□□ -1.44
GARNL3-216ENST00000481242 IGLV5-48A0A075B6I7 105 aa6.04□□□□□ -1.44
GARNL3-216ENST00000481242 FAM229BQ4G0N7 80 aa6.04□□□□□ -1.44
GARNL3-216ENST00000481242 PCNTO95613 3336 aa6.04□□□□□ -1.44
GARNL3-216ENST00000481242 MIR22HGQ0VDD5 57 aa6.02□□□□□ -1.44
GARNL3-216ENST00000481242 BAHCC1Q9P281 2608 aa6.02□□□□□ -1.45
GARNL3-216ENST00000481242 NBEAL1Q6ZS30 2694 aa6.01□□□□□ -1.45
GARNL3-216ENST00000481242 CR1P17927 2039 aa6□□□□□ -1.45
GARNL3-216ENST00000481242 A0A1W2PNM2 257 aa6□□□□□ -1.45
GARNL3-216ENST00000481242 LINC01558Q9Y6Z2 57 aa6□□□□□ -1.45
GARNL3-216ENST00000481242 TRANK1O15050 2925 aa6□□□□□ -1.45
GARNL3-216ENST00000481242 FAM104AQ969W3 186 aa6□□□□□ -1.45
GARNL3-216ENST00000481242 SPINT4Q6UDR6 99 aa6□□□□□ -1.45
GARNL3-216ENST00000481242 Q8N9P0 234 aaPredicted RBP6□□□□□ -1.45
GARNL3-216ENST00000481242 C9orf92A6NGG3 77 aa5.99□□□□□ -1.45
GARNL3-216ENST00000481242 Q5VV11 94 aa5.99□□□□□ -1.45
GARNL3-216ENST00000481242 CHD6Q8TD26 2715 aa5.99□□□□□ -1.45
GARNL3-216ENST00000481242 ANAPC11Q9NYG5 84 aa5.99□□□□□ -1.45
GARNL3-216ENST00000481242 HTTP42858 3142 aa5.99□□□□□ -1.45
GARNL3-216ENST00000481242 NOTCH1P46531 2555 aa5.98□□□□□ -1.45
GARNL3-216ENST00000481242 PLAC8Q9NZF1 115 aa5.98□□□□□ -1.45
GARNL3-216ENST00000481242 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms