RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 CASC10Q5T4H9 136 aa12.56□□□□□ -0.4
CCM2-214ENST00000481194 A0A087WSZ3 146 aa12.55□□□□□ -0.4
CCM2-214ENST00000481194 Q8NBF4 154 aa12.55□□□□□ -0.4
CCM2-214ENST00000481194 MAST4O15021 2626 aa12.55□□□□□ -0.4
CCM2-214ENST00000481194 SNURFQ9Y675 71 aa12.55□□□□□ -0.4
CCM2-214ENST00000481194 LINC00528Q8N1L1 170 aa12.54□□□□□ -0.4
CCM2-214ENST00000481194 TRAV7A0A075B6U4 112 aa12.53□□□□□ -0.4
CCM2-214ENST00000481194 SMCPP49901 116 aaPredicted RBP12.53□□□□□ -0.4
CCM2-214ENST00000481194 Q8N9L7 120 aa12.52□□□□□ -0.4
CCM2-214ENST00000481194 PLA2G1BP04054 148 aaKnown RBP12.52□□□□□ -0.41
CCM2-214ENST00000481194 CCDC179H3BU77 68 aa12.52□□□□□ -0.41
CCM2-214ENST00000481194 Q6ZVQ6 151 aa12.51□□□□□ -0.41
CCM2-214ENST00000481194 CXCL6P80162 114 aa12.51□□□□□ -0.41
CCM2-214ENST00000481194 EIF4EBP3O60516 100 aaPredicted RBP12.5□□□□□ -0.41
CCM2-214ENST00000481194 FRYLO94915 3013 aa12.5□□□□□ -0.41
CCM2-214ENST00000481194 CRYGAP11844 174 aa12.5□□□□□ -0.41
CCM2-214ENST00000481194 K7ERS5 55 aa12.49□□□□□ -0.41
CCM2-214ENST00000481194 SPTSSBQ8NFR3 76 aa12.49□□□□□ -0.41
CCM2-214ENST00000481194 RPL37AP61513 92 aaKnown RBP12.48□□□□□ -0.41
CCM2-214ENST00000481194 LINC00846Q9NV44 126 aa12.47□□□□□ -0.41
CCM2-214ENST00000481194 MOBPQ13875 183 aa12.47□□□□□ -0.41
CCM2-214ENST00000481194 FAM30AQ9NZY2 134 aa12.47□□□□□ -0.41
CCM2-214ENST00000481194 Q6ZQT0 140 aa12.47□□□□□ -0.41
CCM2-214ENST00000481194 TEX15Q9BXT5 2789 aa12.46□□□□□ -0.41
CCM2-214ENST00000481194 ST20-AS1Q8NBB2 130 aa12.45□□□□□ -0.42
CCM2-214ENST00000481194 ATMQ13315 3056 aa12.43□□□□□ -0.42
CCM2-214ENST00000481194 SVIPQ8NHG7 77 aa12.43□□□□□ -0.42
CCM2-214ENST00000481194 LINC01547P58512 204 aaPredicted RBP12.42□□□□□ -0.42
CCM2-214ENST00000481194 ZNF861PO60384 105 aa12.42□□□□□ -0.42
CCM2-214ENST00000481194 USP34Q70CQ2 3546 aa12.41□□□□□ -0.42
CCM2-214ENST00000481194 A0A1W2PNN7 141 aa12.4□□□□□ -0.42
CCM2-214ENST00000481194 TRBV7-4A0A0J9YYF1 115 aa12.4□□□□□ -0.43
CCM2-214ENST00000481194 SMIM26A0A096LP01 95 aa12.39□□□□□ -0.43
CCM2-214ENST00000481194 IGHV6-1A0A0B4J1U7 121 aa12.39□□□□□ -0.43
CCM2-214ENST00000481194 SERP1Q9Y6X1 66 aa12.39□□□□□ -0.43
CCM2-214ENST00000481194 BOD1L1Q8NFC6 3051 aa12.39□□□□□ -0.43
CCM2-214ENST00000481194 A0A087WVE0 104 aa12.38□□□□□ -0.43
CCM2-214ENST00000481194 FREM2Q5SZK8 3169 aa12.38□□□□□ -0.43
CCM2-214ENST00000481194 TRBV7-7A0A0K0K1E9 115 aa12.38□□□□□ -0.43
CCM2-214ENST00000481194 PRR4Q16378 134 aa12.37□□□□□ -0.43
CCM2-214ENST00000481194 CELSR3Q9NYQ7 3312 aa12.37□□□□□ -0.43
CCM2-214ENST00000481194 TYMSOSQ8TAI1 123 aa12.36□□□□□ -0.43
CCM2-214ENST00000481194 UTP20O75691 2785 aaKnown RBP12.36□□□□□ -0.43
CCM2-214ENST00000481194 LINC00208Q96KT6 92 aa12.35□□□□□ -0.43
CCM2-214ENST00000481194 HCG22E2RYF7 251 aa12.35□□□□□ -0.43
CCM2-214ENST00000481194 MGAM2Q2M2H8 2515 aa12.34□□□□□ -0.43
CCM2-214ENST00000481194 TNP2Q05952 138 aa12.34□□□□□ -0.43
CCM2-214ENST00000481194 A6NED7 52 aa12.34□□□□□ -0.43
CCM2-214ENST00000481194 APCP25054 2843 aa12.34□□□□□ -0.43
CCM2-214ENST00000481194 ITPR1Q14643 2758 aa12.34□□□□□ -0.43
CCM2-214ENST00000481194 CDIP1Q9H305 208 aa12.34□□□□□ -0.43
CCM2-214ENST00000481194 SETXQ7Z333 2677 aaKnown RBP12.33□□□□□ -0.43
CCM2-214ENST00000481194 KMT2BQ9UMN6 2715 aaPredicted RBP12.33□□□□□ -0.44
CCM2-214ENST00000481194 IGLV7-43P04211 117 aa12.33□□□□□ -0.44
CCM2-214ENST00000481194 KRTAP26-1Q6PEX3 210 aa12.31□□□□□ -0.44
CCM2-214ENST00000481194 TEP1Q99973 2627 aaKnown RBP12.31□□□□□ -0.44
CCM2-214ENST00000481194 SSBP3-AS1Q7Z2R9 100 aa12.31□□□□□ -0.44
CCM2-214ENST00000481194 COL12A1Q99715 3063 aa12.29□□□□□ -0.44
CCM2-214ENST00000481194 PSORS1C2Q9UIG4 136 aa12.29□□□□□ -0.44
CCM2-214ENST00000481194 SPACA4Q8TDM5 124 aa12.28□□□□□ -0.44
CCM2-214ENST00000481194 GCN1Q92616 2671 aaKnown RBP12.28□□□□□ -0.44
CCM2-214ENST00000481194 ADGRG4Q8IZF6 3080 aa12.28□□□□□ -0.44
CCM2-214ENST00000481194 Q8N377 158 aa12.27□□□□□ -0.44
CCM2-214ENST00000481194 A0A0U1RQV1 116 aa12.26□□□□□ -0.45
CCM2-214ENST00000481194 DEFB116Q30KQ4 102 aa12.25□□□□□ -0.45
CCM2-214ENST00000481194 SPAG11AQ6PDA7 123 aa12.24□□□□□ -0.45
CCM2-214ENST00000481194 HRNRQ86YZ3 2850 aaPredicted RBP12.24□□□□□ -0.45
CCM2-214ENST00000481194 SPRR4Q96PI1 79 aa12.23□□□□□ -0.45
CCM2-214ENST00000481194 KALRNO60229 2985 aa12.23□□□□□ -0.45
CCM2-214ENST00000481194 TMEM254Q8TBM7 123 aa12.23□□□□□ -0.45
CCM2-214ENST00000481194 KRTAP1-5Q9BYS1 174 aa12.23□□□□□ -0.45
CCM2-214ENST00000481194 COL6A5A8TX70 2615 aa12.22□□□□□ -0.45
CCM2-214ENST00000481194 LRBAP50851 2863 aa12.22□□□□□ -0.45
CCM2-214ENST00000481194 H0Y9P7 68 aa12.22□□□□□ -0.45
CCM2-214ENST00000481194 PLAC8Q9NZF1 115 aa12.22□□□□□ -0.45
CCM2-214ENST00000481194 IGFL1Q6UW32 110 aa12.21□□□□□ -0.45
CCM2-214ENST00000481194 TP53AIP1Q9HCN2 124 aa12.21□□□□□ -0.45
CCM2-214ENST00000481194 ITPR2Q14571 2701 aa12.21□□□□□ -0.45
CCM2-214ENST00000481194 LCE6AA0A183 80 aa12.21□□□□□ -0.46
CCM2-214ENST00000481194 LINC01600Q96MT4 127 aa12.2□□□□□ -0.46
CCM2-214ENST00000481194 HIVEP1P15822 2718 aa12.19□□□□□ -0.46
CCM2-214ENST00000481194 hDV103S1A0JD37 113 aa12.19□□□□□ -0.46
CCM2-214ENST00000481194 MYO15AQ9UKN7 3530 aa12.18□□□□□ -0.46
CCM2-214ENST00000481194 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.18□□□□□ -0.46
CCM2-214ENST00000481194 NBEAQ8NFP9 2946 aa12.17□□□□□ -0.46
CCM2-214ENST00000481194 C8orf87E5RJ46 101 aa12.17□□□□□ -0.46
CCM2-214ENST00000481194 IGLV5-48A0A075B6I7 105 aa12.14□□□□□ -0.47
CCM2-214ENST00000481194 Q6ZR54 194 aa12.13□□□□□ -0.47
CCM2-214ENST00000481194 A8MWP4 228 aa12.13□□□□□ -0.47
CCM2-214ENST00000481194 ERC2-IT1O76042 136 aa12.13□□□□□ -0.47
CCM2-214ENST00000481194 SPRR1AP35321 89 aa12.13□□□□□ -0.47
CCM2-214ENST00000481194 PCOTHQ58A44 107 aa12.13□□□□□ -0.47
CCM2-214ENST00000481194 NSD1Q96L73 2696 aaPredicted RBP12.13□□□□□ -0.47
CCM2-214ENST00000481194 LINC00304Q8N9R0 145 aa12.13□□□□□ -0.47
CCM2-214ENST00000481194 SMIM29Q86T20 159 aa12.1□□□□□ -0.47
CCM2-214ENST00000481194 OBSCN-AS1Q96MR7 158 aa12.1□□□□□ -0.47
CCM2-214ENST00000481194 LINC00313P59037 77 aa12.1□□□□□ -0.47
CCM2-214ENST00000481194 SPEGQ15772 3267 aa12.09□□□□□ -0.47
CCM2-214ENST00000481194 C1orf195Q5TG92 126 aa12.09□□□□□ -0.47
CCM2-214ENST00000481194 LOC400499M0QZD8 3231 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms