RNA–Protein interactions for RNA: ENST00000481154.1

PTPN12-211, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-211ENST00000481154 ZFHX3Q15911 3703 aa1.34□□□□□ -2.19
PTPN12-211ENST00000481154 G3V318 75 aa1.34□□□□□ -2.19
PTPN12-211ENST00000481154 CRIP1P50238 77 aa1.34□□□□□ -2.19
PTPN12-211ENST00000481154 LINC00158P58513 81 aa1.34□□□□□ -2.19
PTPN12-211ENST00000481154 UNQ6190/PRO20217Q6UXQ8 127 aa1.34□□□□□ -2.19
PTPN12-211ENST00000481154 UBE2DNLQ8IWF7 75 aa1.34□□□□□ -2.19
PTPN12-211ENST00000481154 DDX60LQ5H9U9 1706 aaKnown RBP1.34□□□□□ -2.2
PTPN12-211ENST00000481154 KIF21BO75037 1637 aa1.33□□□□□ -2.2
PTPN12-211ENST00000481154 CLTCL1P53675 1640 aa1.33□□□□□ -2.2
PTPN12-211ENST00000481154 LINC00575Q6W349 94 aa1.33□□□□□ -2.2
PTPN12-211ENST00000481154 USMG5Q96IX5 58 aa1.33□□□□□ -2.2
PTPN12-211ENST00000481154 SMIM2Q9BVW6 85 aa1.33□□□□□ -2.2
PTPN12-211ENST00000481154 F5P12259 2224 aa1.32□□□□□ -2.2
PTPN12-211ENST00000481154 A0A0G2JMZ2 1700 aa1.32□□□□□ -2.2
PTPN12-211ENST00000481154 KRTAP10-4P60372 401 aaPredicted RBP1.32□□□□□ -2.2
PTPN12-211ENST00000481154 Q8IZM0 81 aa1.32□□□□□ -2.2
PTPN12-211ENST00000481154 LINC00308Q8TCZ7 52 aa1.32□□□□□ -2.2
PTPN12-211ENST00000481154 CDKN2A-AS1Q9UH64 79 aa1.32□□□□□ -2.2
PTPN12-211ENST00000481154 IQGAP1P46940 1657 aa1.31□□□□□ -2.2
PTPN12-211ENST00000481154 C4AP0C0L4 1744 aa1.31□□□□□ -2.2
PTPN12-211ENST00000481154 CACNA1CQ13936 2221 aa1.31□□□□□ -2.2
PTPN12-211ENST00000481154 ABCA1O95477 2261 aa1.31□□□□□ -2.2
PTPN12-211ENST00000481154 LRRC37AA6NMS7 1700 aa1.3□□□□□ -2.2
PTPN12-211ENST00000481154 GOLGA4Q13439 2230 aaKnown RBP1.3□□□□□ -2.2
PTPN12-211ENST00000481154 COX6B2Q6YFQ2 88 aa1.3□□□□□ -2.2
PTPN12-211ENST00000481154 TP53AIP1Q9HCN2 124 aa1.3□□□□□ -2.2
PTPN12-211ENST00000481154 URB1O60287 2271 aaKnown RBP1.29□□□□□ -2.2
PTPN12-211ENST00000481154 PLXNB2O15031 1838 aa1.29□□□□□ -2.2
PTPN12-211ENST00000481154 RPL37P61927 97 aaKnown RBP1.29□□□□□ -2.2
PTPN12-211ENST00000481154 PIGYQ3MUY2 71 aa1.29□□□□□ -2.2
PTPN12-211ENST00000481154 KNTC1P50748 2209 aa1.29□□□□□ -2.2
PTPN12-211ENST00000481154 ANKRD17O75179 2603 aaKnown RBP1.28□□□□□ -2.2
PTPN12-211ENST00000481154 K7EQZ3 153 aa1.28□□□□□ -2.2
PTPN12-211ENST00000481154 CCL22O00626 93 aa1.28□□□□□ -2.2
PTPN12-211ENST00000481154 NDUFA1O15239 70 aa1.28□□□□□ -2.2
PTPN12-211ENST00000481154 TECTAO75443 2155 aa1.28□□□□□ -2.2
PTPN12-211ENST00000481154 ASCC3Q8N3C0 2202 aaKnown RBP1.28□□□□□ -2.2
PTPN12-211ENST00000481154 TOGARAM1Q9Y4F4 1720 aa1.27□□□□□ -2.21
PTPN12-211ENST00000481154 E9PCH4 1651 aa1.27□□□□□ -2.21
PTPN12-211ENST00000481154 LMO7Q8WWI1 1683 aa1.27□□□□□ -2.21
PTPN12-211ENST00000481154 LYNX1G3V0Z9 82 aa1.27□□□□□ -2.21
PTPN12-211ENST00000481154 TFF3Q07654 80 aa1.27□□□□□ -2.21
PTPN12-211ENST00000481154 CNFNQ9BYD5 112 aa1.27□□□□□ -2.21
PTPN12-211ENST00000481154 PRO3102Q9H379 93 aa1.27□□□□□ -2.21
PTPN12-211ENST00000481154 AHCTF1Q8WYP5 2266 aa1.27□□□□□ -2.21
PTPN12-211ENST00000481154 GCC2Q8IWJ2 1684 aa1.26□□□□□ -2.21
PTPN12-211ENST00000481154 DUOX1Q9NRD9 1551 aa1.26□□□□□ -2.21
PTPN12-211ENST00000481154 CADP27708 2225 aa1.26□□□□□ -2.21
PTPN12-211ENST00000481154 IAPPP10997 89 aa1.26□□□□□ -2.21
PTPN12-211ENST00000481154 MINOS1Q5TGZ0 78 aa1.26□□□□□ -2.21
PTPN12-211ENST00000481154 MRPL34Q9BQ48 92 aaKnown RBP1.26□□□□□ -2.21
PTPN12-211ENST00000481154 ASXL3Q9C0F0 2248 aa1.25□□□□□ -2.21
PTPN12-211ENST00000481154 SSC5DA1L4H1 1573 aa1.25□□□□□ -2.21
PTPN12-211ENST00000481154 ARHGAP5-AS1Q96IT6 56 aa1.25□□□□□ -2.21
PTPN12-211ENST00000481154 C6orf48Q9UBA6 75 aa1.24□□□□□ -2.21
PTPN12-211ENST00000481154 PRB3Q04118 309 aaPredicted RBP1.23□□□□□ -2.21
PTPN12-211ENST00000481154 DEFB123Q8N688 67 aa1.23□□□□□ -2.21
PTPN12-211ENST00000481154 C4BP0C0L5 1744 aa1.23□□□□□ -2.21
PTPN12-211ENST00000481154 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
PTPN12-211ENST00000481154 ROS1P08922 2347 aa1.22□□□□□ -2.21
PTPN12-211ENST00000481154 LOC730098B7Z3J9 87 aa1.21□□□□□ -2.22
PTPN12-211ENST00000481154 COX6A2Q02221 97 aa1.21□□□□□ -2.22
PTPN12-211ENST00000481154 CACNA1EQ15878 2313 aa1.2□□□□□ -2.22
PTPN12-211ENST00000481154 I3L2K1 104 aa1.2□□□□□ -2.22
PTPN12-211ENST00000481154 POLR2KP53803 58 aaKnown RBP1.2□□□□□ -2.22
PTPN12-211ENST00000481154 BPTFQ12830 3046 aa1.19□□□□□ -2.22
PTPN12-211ENST00000481154 WFDC10BQ8IUB3 73 aa1.19□□□□□ -2.22
PTPN12-211ENST00000481154 CNOT1A5YKK6 2376 aaKnown RBP1.19□□□□□ -2.22
PTPN12-211ENST00000481154 K7EIL1 84 aa1.18□□□□□ -2.22
PTPN12-211ENST00000481154 TNRC6CQ9HCJ0 1690 aaKnown RBP1.17□□□□□ -2.22
PTPN12-211ENST00000481154 IGLV5-48A0A075B6I7 105 aa1.17□□□□□ -2.22
PTPN12-211ENST00000481154 H3BUA1 57 aa1.17□□□□□ -2.22
PTPN12-211ENST00000481154 SPINK9Q5DT21 86 aa1.17□□□□□ -2.22
PTPN12-211ENST00000481154 RPS27LQ71UM5 84 aaKnown RBP1.17□□□□□ -2.22
PTPN12-211ENST00000481154 WFDC13Q8IUB5 93 aa1.17□□□□□ -2.22
PTPN12-211ENST00000481154 PRO0255Q9UI72 69 aa1.17□□□□□ -2.22
PTPN12-211ENST00000481154 APLNQ9ULZ1 77 aa1.17□□□□□ -2.22
PTPN12-211ENST00000481154 NAV3Q8IVL0 2385 aa1.16□□□□□ -2.22
PTPN12-211ENST00000481154 ZDBF2Q9HCK1 2354 aa1.16□□□□□ -2.22
PTPN12-211ENST00000481154 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.16□□□□□ -2.22
PTPN12-211ENST00000481154 H0YAA0 97 aa1.16□□□□□ -2.22
PTPN12-211ENST00000481154 DEFB131AP59861 70 aa1.16□□□□□ -2.22
PTPN12-211ENST00000481154 H1FX-AS1Q4G0G2 97 aa1.16□□□□□ -2.22
PTPN12-211ENST00000481154 LINC01590Q5TEZ4 76 aa1.16□□□□□ -2.22
PTPN12-211ENST00000481154 TTTY10Q9BZA0 68 aa1.16□□□□□ -2.22
PTPN12-211ENST00000481154 DOPEY2Q9Y3R5 2298 aa1.15□□□□□ -2.22
PTPN12-211ENST00000481154 WNK2Q9Y3S1 2297 aa1.15□□□□□ -2.22
PTPN12-211ENST00000481154 CACNA1BQ00975 2339 aa1.15□□□□□ -2.23
PTPN12-211ENST00000481154 DEFB130BP0DP73 79 aa1.15□□□□□ -2.23
PTPN12-211ENST00000481154 DEFB130AP0DP74 79 aa1.15□□□□□ -2.23
PTPN12-211ENST00000481154 RPL39P62891 51 aaKnown RBP1.15□□□□□ -2.23
PTPN12-211ENST00000481154 KAAG1Q9UBP8 84 aa1.15□□□□□ -2.23
PTPN12-211ENST00000481154 FAM208BQ5VWN6 2430 aa1.15□□□□□ -2.23
PTPN12-211ENST00000481154 SPRR1AP35321 89 aa1.14□□□□□ -2.23
PTPN12-211ENST00000481154 RPS27P42677 84 aaKnown RBP1.14□□□□□ -2.23
PTPN12-211ENST00000481154 WT1-ASQ06250 92 aa1.14□□□□□ -2.23
PTPN12-211ENST00000481154 KRTAP5-10Q6L8G5 202 aa1.14□□□□□ -2.23
PTPN12-211ENST00000481154 DEFB105AQ8NG35 78 aa1.14□□□□□ -2.23
PTPN12-211ENST00000481154 RPL39LQ96EH5 51 aaKnown RBP1.13□□□□□ -2.23
PTPN12-211ENST00000481154 C10orf95Q9H7T3 257 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms