RNA–Protein interactions for RNA: ENST00000480226.5

ITGB1-212, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-212ENST00000480226 CACNA1EQ15878 2313 aa1.2□□□□□ -2.22
ITGB1-212ENST00000480226 UBL5Q9BZL1 73 aa1.18□□□□□ -2.22
ITGB1-212ENST00000480226 FANCD2Q9BXW9 1451 aa1.18□□□□□ -2.22
ITGB1-212ENST00000480226 HELZ2Q9BYK8 2649 aaKnown RBP1.18□□□□□ -2.22
ITGB1-212ENST00000480226 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.17□□□□□ -2.221e-6■■□□□ 14.5
ITGB1-212ENST00000480226 CNOT1A5YKK6 2376 aaKnown RBP1.17□□□□□ -2.22
ITGB1-212ENST00000480226 I3L3M4 83 aa1.17□□□□□ -2.22
ITGB1-212ENST00000480226 COX6A2Q02221 97 aa1.17□□□□□ -2.22
ITGB1-212ENST00000480226 NRXN3Q9Y4C0 1643 aa1.17□□□□□ -2.22
ITGB1-212ENST00000480226 ASH1LQ9NR48 2969 aaKnown RBP1.16□□□□□ -2.22
ITGB1-212ENST00000480226 K7EMI3 77 aa1.16□□□□□ -2.22
ITGB1-212ENST00000480226 USMG5Q96IX5 58 aa1.16□□□□□ -2.22
ITGB1-212ENST00000480226 MRPL34Q9BQ48 92 aaKnown RBP1.16□□□□□ -2.22
ITGB1-212ENST00000480226 FCER1GP30273 86 aa1.15□□□□□ -2.23
ITGB1-212ENST00000480226 Q8IZM0 81 aa1.15□□□□□ -2.23
ITGB1-212ENST00000480226 FXYD6Q9H0Q3 95 aa1.15□□□□□ -2.23
ITGB1-212ENST00000480226 KCNQ1DNQ9H478 68 aa1.15□□□□□ -2.23
ITGB1-212ENST00000480226 PTPRZ1P23471 2315 aaPredicted RBP1.15□□□□□ -2.23
ITGB1-212ENST00000480226 ABCA5Q8WWZ7 1642 aa1.15□□□□□ -2.23
ITGB1-212ENST00000480226 ZNF462Q96JM2 2506 aa1.14□□□□□ -2.23
ITGB1-212ENST00000480226 PTPRQQ9UMZ3 2332 aa1.14□□□□□ -2.23
ITGB1-212ENST00000480226 PRB3Q04118 309 aaPredicted RBP1.14□□□□□ -2.23
ITGB1-212ENST00000480226 CACNA1HO95180 2353 aa1.12□□□□□ -2.23
ITGB1-212ENST00000480226 LELP1Q5T871 98 aa1.12□□□□□ -2.23
ITGB1-212ENST00000480226 C2CD3Q4AC94 2353 aa1.12□□□□□ -2.23
ITGB1-212ENST00000480226 ADCY10Q96PN6 1610 aa1.11□□□□□ -2.23
ITGB1-212ENST00000480226 COX6B1P14854 86 aa1.11□□□□□ -2.23
ITGB1-212ENST00000480226 ETDCA0A1B0GVM5 59 aa1.1□□□□□ -2.23
ITGB1-212ENST00000480226 M0R1W7 72 aa1.1□□□□□ -2.23
ITGB1-212ENST00000480226 SPRR1AP35321 89 aa1.1□□□□□ -2.23
ITGB1-212ENST00000480226 NDUFA3O95167 84 aa1.09□□□□□ -2.23
ITGB1-212ENST00000480226 DEFB114Q30KQ6 69 aa1.09□□□□□ -2.23
ITGB1-212ENST00000480226 PIEZO2Q9H5I5 2752 aa1.08□□□□□ -2.24
ITGB1-212ENST00000480226 DEFB131BA0A096LNP1 70 aa1.08□□□□□ -2.24
ITGB1-212ENST00000480226 CRIP1P50238 77 aa1.08□□□□□ -2.24
ITGB1-212ENST00000480226 NCBP2-AS2Q69YL0 99 aa1.08□□□□□ -2.24
ITGB1-212ENST00000480226 APLNQ9ULZ1 77 aa1.08□□□□□ -2.24
ITGB1-212ENST00000480226 AGLP35573 1532 aa1.08□□□□□ -2.24
ITGB1-212ENST00000480226 EFCAB6Q5THR3 1501 aa1.08□□□□□ -2.24
ITGB1-212ENST00000480226 CDC42BPAQ5VT25 1732 aa1.07□□□□□ -2.24
ITGB1-212ENST00000480226 DDX60Q8IY21 1712 aaKnown RBP1.07□□□□□ -2.24
ITGB1-212ENST00000480226 TOP2AP11388 1531 aaKnown RBP1.07□□□□□ -2.24
ITGB1-212ENST00000480226 SNRPGP15A8MWD9 76 aa1.07□□□□□ -2.24
ITGB1-212ENST00000480226 CCL22O00626 93 aa1.07□□□□□ -2.24
ITGB1-212ENST00000480226 Q5VSD8 79 aa1.07□□□□□ -2.24
ITGB1-212ENST00000480226 KRTAP5-10Q6L8G5 202 aa1.07□□□□□ -2.24
ITGB1-212ENST00000480226 ABCC8Q09428 1581 aa1.07□□□□□ -2.24
ITGB1-212ENST00000480226 MRPL33O75394 65 aaKnown RBP1.06□□□□□ -2.24
ITGB1-212ENST00000480226 SPRR1BP22528 89 aa1.06□□□□□ -2.24
ITGB1-212ENST00000480226 H1FX-AS1Q4G0G2 97 aa1.06□□□□□ -2.24
ITGB1-212ENST00000480226 DEFB105AQ8NG35 78 aa1.06□□□□□ -2.24
ITGB1-212ENST00000480226 PRO3102Q9H379 93 aa1.06□□□□□ -2.24
ITGB1-212ENST00000480226 BPTFQ12830 3046 aa1.06□□□□□ -2.24
ITGB1-212ENST00000480226 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
ITGB1-212ENST00000480226 NMES1Q9C002 83 aa1.05□□□□□ -2.24
ITGB1-212ENST00000480226 CDKN2A-AS1Q9UH64 79 aa1.05□□□□□ -2.24
ITGB1-212ENST00000480226 TTC28Q96AY4 2481 aa1.05□□□□□ -2.24
ITGB1-212ENST00000480226 IQGAP1P46940 1657 aa1.04□□□□□ -2.24
ITGB1-212ENST00000480226 IGIPA6NJ69 53 aa1.04□□□□□ -2.24
ITGB1-212ENST00000480226 KLK9Q2XQG4 91 aa1.04□□□□□ -2.24
ITGB1-212ENST00000480226 COX6B2Q6YFQ2 88 aa1.04□□□□□ -2.24
ITGB1-212ENST00000480226 IQGAP2Q13576 1575 aa1.04□□□□□ -2.24
ITGB1-212ENST00000480226 SPTBN2O15020 2390 aa1.04□□□□□ -2.24
ITGB1-212ENST00000480226 DEPDC5O75140 1603 aa1.04□□□□□ -2.24
ITGB1-212ENST00000480226 LOC730098B7Z3J9 87 aa1.03□□□□□ -2.24
ITGB1-212ENST00000480226 H0YAA0 97 aa1.03□□□□□ -2.24
ITGB1-212ENST00000480226 MEGF8Q7Z7M0 2845 aa1.03□□□□□ -2.24
ITGB1-212ENST00000480226 KIAA0586Q9BVV6 1533 aa1.02□□□□□ -2.25
ITGB1-212ENST00000480226 FAM208AQ9UK61 1670 aaKnown RBP1.02□□□□□ -2.25
ITGB1-212ENST00000480226 LINC00158P58513 81 aa1.01□□□□□ -2.25
ITGB1-212ENST00000480226 WFDC13Q8IUB5 93 aa1.01□□□□□ -2.25
ITGB1-212ENST00000480226 SERF2P84101 59 aa1□□□□□ -2.25
ITGB1-212ENST00000480226 F8P00451 2351 aa1□□□□□ -2.25
ITGB1-212ENST00000480226 LMO7Q8WWI1 1683 aa1□□□□□ -2.25
ITGB1-212ENST00000480226 SPTBN1Q01082 2364 aaKnown RBP0.99□□□□□ -2.25
ITGB1-212ENST00000480226 POLQO75417 2590 aa0.98□□□□□ -2.25
ITGB1-212ENST00000480226 CMC2Q9NRP2 79 aa0.98□□□□□ -2.25
ITGB1-212ENST00000480226 KNL1Q8NG31 2342 aa0.97□□□□□ -2.25
ITGB1-212ENST00000480226 PRH1P02810 166 aa0.97□□□□□ -2.25
ITGB1-212ENST00000480226 ZNF292O60281 2723 aa0.96□□□□□ -2.26
ITGB1-212ENST00000480226 PLNP26678 52 aa0.96□□□□□ -2.26
ITGB1-212ENST00000480226 PKDREJQ9NTG1 2253 aa0.96□□□□□ -2.26
ITGB1-212ENST00000480226 GVINP1Q7Z2Y8 2422 aa0.95□□□□□ -2.26
ITGB1-212ENST00000480226 LYNX1G3V0Z9 82 aa0.94□□□□□ -2.26
ITGB1-212ENST00000480226 TOMM5Q8N4H5 51 aa0.93□□□□□ -2.26
ITGB1-212ENST00000480226 CELSR2Q9HCU4 2923 aa0.93□□□□□ -2.26
ITGB1-212ENST00000480226 IAPPP10997 89 aa0.92□□□□□ -2.26
ITGB1-212ENST00000480226 DEFB109BQ30KR1 87 aa0.92□□□□□ -2.26
ITGB1-212ENST00000480226 MINOS1Q5TGZ0 78 aa0.92□□□□□ -2.26
ITGB1-212ENST00000480226 SPINK4O60575 86 aa0.91□□□□□ -2.26
ITGB1-212ENST00000480226 DEFB130BP0DP73 79 aa0.91□□□□□ -2.26
ITGB1-212ENST00000480226 DEFB130AP0DP74 79 aa0.91□□□□□ -2.26
ITGB1-212ENST00000480226 ABCA12Q86UK0 2595 aa0.9□□□□□ -2.27
ITGB1-212ENST00000480226 SMIM27A0A1W2PRY6 76 aa0.9□□□□□ -2.27
ITGB1-212ENST00000480226 H0YGX0 51 aa0.9□□□□□ -2.27
ITGB1-212ENST00000480226 ABRACLQ9P1F3 81 aa0.9□□□□□ -2.27
ITGB1-212ENST00000480226 TIMM8BQ9Y5J9 83 aaPredicted RBP0.9□□□□□ -2.27
ITGB1-212ENST00000480226 NCOR1O75376 2440 aa0.9□□□□□ -2.27
ITGB1-212ENST00000480226 TENM3Q9P273 2699 aa0.89□□□□□ -2.27
ITGB1-212ENST00000480226 WNK2Q9Y3S1 2297 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms