RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	TRAV13-2	A0A0B4J235	113 aa		9.41	□□□□□ -0.9
HDLBP-238	ENST00000479894	RPL37AP8	A6NKH3	93 aa		9.41	□□□□□ -0.9
HDLBP-238	ENST00000479894	DDT	P30046	118 aa		9.41	□□□□□ -0.9
HDLBP-238	ENST00000479894	PRR4	Q16378	134 aa		9.41	□□□□□ -0.9
HDLBP-238	ENST00000479894	TMEM238L	A0A1B0GVL6	79 aa		9.4	□□□□□ -0.9
HDLBP-238	ENST00000479894		A6NJY4	79 aa		9.4	□□□□□ -0.9
HDLBP-238	ENST00000479894	PRY	O14603	147 aa		9.4	□□□□□ -0.9
HDLBP-238	ENST00000479894	C1orf137	Q5JT78	98 aa		9.4	□□□□□ -0.9
HDLBP-238	ENST00000479894	IGKV2-28	A0A075B6P5	120 aa		9.39	□□□□□ -0.91
HDLBP-238	ENST00000479894	TSTD3	H0UI37	97 aa		9.39	□□□□□ -0.91
HDLBP-238	ENST00000479894	IGKV2D-28	P01615	120 aa		9.39	□□□□□ -0.91
HDLBP-238	ENST00000479894	OR13C6P	Q8NH95	151 aa		9.39	□□□□□ -0.91
HDLBP-238	ENST00000479894	KCNQ1DN	Q9H478	68 aa		9.39	□□□□□ -0.91
HDLBP-238	ENST00000479894	BCE1	O60756	84 aa		9.38	□□□□□ -0.91
HDLBP-238	ENST00000479894	HINT1	P49773	126 aa	Predicted RBP	9.38	□□□□□ -0.91
HDLBP-238	ENST00000479894	PRR26	Q8N8Z3	221 aa		9.38	□□□□□ -0.91
HDLBP-238	ENST00000479894		Q8NDZ9	215 aa		9.38	□□□□□ -0.91
HDLBP-238	ENST00000479894	C12orf57	Q99622	126 aa		9.38	□□□□□ -0.91
HDLBP-238	ENST00000479894	TRBV10-3	A0A0K0K1G6	114 aa		9.37	□□□□□ -0.91
HDLBP-238	ENST00000479894	EIF4EBP3	O60516	100 aa	Predicted RBP	9.37	□□□□□ -0.91
HDLBP-238	ENST00000479894	IGLV6-57	P01721	117 aa		9.37	□□□□□ -0.91
HDLBP-238	ENST00000479894	RPL28	P46779	137 aa	Known RBP	9.37	□□□□□ -0.91
HDLBP-238	ENST00000479894	HSD52	Q0P140	79 aa		9.37	□□□□□ -0.91
HDLBP-238	ENST00000479894	C2orf91	Q6ZV80	131 aa		9.37	□□□□□ -0.91
HDLBP-238	ENST00000479894		A6NDN8	102 aa		9.36	□□□□□ -0.91
HDLBP-238	ENST00000479894		A4D1N5	150 aa		9.35	□□□□□ -0.91
HDLBP-238	ENST00000479894	IGLV7-43	P04211	117 aa		9.35	□□□□□ -0.91
HDLBP-238	ENST00000479894	CEND1	Q8N111	149 aa		9.35	□□□□□ -0.91
HDLBP-238	ENST00000479894	CRCT1	Q9UGL9	99 aa		9.35	□□□□□ -0.91
HDLBP-238	ENST00000479894	TRAV23DV6	A0A075B6W5	121 aa		9.34	□□□□□ -0.91
HDLBP-238	ENST00000479894	ETDC	A0A1B0GVM5	59 aa		9.34	□□□□□ -0.91
HDLBP-238	ENST00000479894	UBE2A	P49459	152 aa		9.34	□□□□□ -0.91
HDLBP-238	ENST00000479894	LCE2D	Q5TA82	110 aa	Predicted RBP	9.34	□□□□□ -0.91
HDLBP-238	ENST00000479894	LINC00337	Q8N6G1	96 aa		9.34	□□□□□ -0.91
HDLBP-238	ENST00000479894		H0Y9J4	135 aa		9.33	□□□□□ -0.92
HDLBP-238	ENST00000479894	DIRC1	Q969H9	104 aa		9.33	□□□□□ -0.92
HDLBP-238	ENST00000479894	ZNF861P	O60384	105 aa		9.32	□□□□□ -0.92
HDLBP-238	ENST00000479894	FAM19A1	Q7Z5A9	133 aa		9.32	□□□□□ -0.92
HDLBP-238	ENST00000479894	RAB37	Q96AX2	223 aa		9.32	□□□□□ -0.92
HDLBP-238	ENST00000479894	PRO1933	Q9H354	126 aa		9.32	□□□□□ -0.92
HDLBP-238	ENST00000479894	FSIP2	Q5CZC0	6907 aa		9.31	□□□□□ -0.92
HDLBP-238	ENST00000479894	ZNF73	O43830	326 aa	Predicted RBP	9.31	□□□□□ -0.92
HDLBP-238	ENST00000479894	SPRR1A	P35321	89 aa		9.31	□□□□□ -0.92
HDLBP-238	ENST00000479894	KRTAP11-1	Q8IUC1	163 aa		9.31	□□□□□ -0.92
HDLBP-238	ENST00000479894		M0R143	59 aa		9.3	□□□□□ -0.92
HDLBP-238	ENST00000479894	VAMP3	Q15836	100 aa		9.3	□□□□□ -0.92
HDLBP-238	ENST00000479894		A0A0B4J2C4	111 aa		9.29	□□□□□ -0.92
HDLBP-238	ENST00000479894	TRBV7-6	A0A0J9YX20	115 aa		9.29	□□□□□ -0.92
HDLBP-238	ENST00000479894	CFC1B	P0CG36	223 aa		9.26	□□□□□ -0.93
HDLBP-238	ENST00000479894	CFC1	P0CG37	223 aa		9.26	□□□□□ -0.93
HDLBP-238	ENST00000479894	RPL13A	P40429	203 aa	Known RBP	9.26	□□□□□ -0.93
HDLBP-238	ENST00000479894	PRO1854	Q9UHT4	67 aa		9.26	□□□□□ -0.93
HDLBP-238	ENST00000479894		A0A1B0GWB2	263 aa		9.25	□□□□□ -0.93
HDLBP-238	ENST00000479894		Q6ZRX8	168 aa		9.25	□□□□□ -0.93
HDLBP-238	ENST00000479894	DHRS4-AS1	Q9P1J3	65 aa		9.25	□□□□□ -0.93
HDLBP-238	ENST00000479894		B5MCH6	92 aa		9.24	□□□□□ -0.93
HDLBP-238	ENST00000479894	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	9.24	□□□□□ -0.93
HDLBP-238	ENST00000479894	SNCG	O76070	127 aa		9.24	□□□□□ -0.93
HDLBP-238	ENST00000479894	KRTAP1-4	P0C5Y4	121 aa		9.24	□□□□□ -0.93
HDLBP-238	ENST00000479894	C6orf99	Q4VX62	202 aa		9.24	□□□□□ -0.93
HDLBP-238	ENST00000479894	KRTAP13-1	Q8IUC0	172 aa		9.24	□□□□□ -0.93
HDLBP-238	ENST00000479894	ZNF706	Q9Y5V0	76 aa	Predicted RBP	9.24	□□□□□ -0.93
HDLBP-238	ENST00000479894	COX7B	P24311	80 aa		9.23	□□□□□ -0.93
HDLBP-238	ENST00000479894	FXYD2	P54710	66 aa		9.23	□□□□□ -0.93
HDLBP-238	ENST00000479894	CTAG1A	P78358	180 aa		9.23	□□□□□ -0.93
HDLBP-238	ENST00000479894	BVES-AS1	Q5T3Y7	98 aa		9.23	□□□□□ -0.93
HDLBP-238	ENST00000479894	NHP2	Q9NX24	153 aa	Known RBP	9.23	□□□□□ -0.93
HDLBP-238	ENST00000479894	PRLH	P81277	87 aa		9.22	□□□□□ -0.93
HDLBP-238	ENST00000479894		Q1RN00	199 aa		9.22	□□□□□ -0.93
HDLBP-238	ENST00000479894	SMIM11B	Q8TCY0	68 aa		9.22	□□□□□ -0.93
HDLBP-238	ENST00000479894	HIGD2A	Q9BW72	106 aa		9.22	□□□□□ -0.93
HDLBP-238	ENST00000479894	SLC25A20	O43772	301 aa		9.21	□□□□□ -0.94
HDLBP-238	ENST00000479894	ELOF1	P60002	83 aa	Known RBP	9.2	□□□□□ -0.94
HDLBP-238	ENST00000479894	MUC17	Q685J3	4493 aa		9.19	□□□□□ -0.94
HDLBP-238	ENST00000479894		H0YGX0	51 aa		9.18	□□□□□ -0.94
HDLBP-238	ENST00000479894		H7C2G1	150 aa		9.18	□□□□□ -0.94
HDLBP-238	ENST00000479894	COX6C	P09669	75 aa		9.18	□□□□□ -0.94
HDLBP-238	ENST00000479894	SMCR5	Q8TEV8	140 aa		9.17	□□□□□ -0.94
HDLBP-238	ENST00000479894	GHRH	P01286	108 aa		9.14	□□□□□ -0.95
HDLBP-238	ENST00000479894	PSMB2	P49721	201 aa		9.14	□□□□□ -0.95
HDLBP-238	ENST00000479894	FAM229B	Q4G0N7	80 aa		9.14	□□□□□ -0.95
HDLBP-238	ENST00000479894		Q9BRP9	147 aa		9.13	□□□□□ -0.95
HDLBP-238	ENST00000479894	TSPAN13	O95857	204 aa		9.12	□□□□□ -0.95
HDLBP-238	ENST00000479894		A0A1B0GX51	115 aa		9.11	□□□□□ -0.95
HDLBP-238	ENST00000479894	hADV29S1	A0JD25	119 aa		9.11	□□□□□ -0.95
HDLBP-238	ENST00000479894	CRYGA	P11844	174 aa		9.11	□□□□□ -0.95
HDLBP-238	ENST00000479894	LINC00575	Q6W349	94 aa		9.11	□□□□□ -0.95
HDLBP-238	ENST00000479894	SPRR4	Q96PI1	79 aa		9.11	□□□□□ -0.95
HDLBP-238	ENST00000479894		K7ERJ3	54 aa		9.1	□□□□□ -0.95
HDLBP-238	ENST00000479894	BATF	Q16520	125 aa		9.09	□□□□□ -0.95
HDLBP-238	ENST00000479894	TPRXL	Q17RH7	258 aa		9.09	□□□□□ -0.95
HDLBP-238	ENST00000479894	CDIP1	Q9H305	208 aa		9.09	□□□□□ -0.95
HDLBP-238	ENST00000479894	SCGB1C2	P0DMR2	95 aa		9.08	□□□□□ -0.96
HDLBP-238	ENST00000479894	LINC01547	P58512	204 aa	Predicted RBP	9.08	□□□□□ -0.96
HDLBP-238	ENST00000479894	OCIAD2	Q56VL3	154 aa		9.08	□□□□□ -0.96
HDLBP-238	ENST00000479894	LYRM7	Q5U5X0	104 aa		9.08	□□□□□ -0.96
HDLBP-238	ENST00000479894	ERC2-IT1	O76042	136 aa		9.07	□□□□□ -0.96
HDLBP-238	ENST00000479894	GAGE2A	Q6NT46	116 aa		9.07	□□□□□ -0.96
HDLBP-238	ENST00000479894	TEX49	A0A1B0GTD5	131 aa		9.06	□□□□□ -0.96
HDLBP-238	ENST00000479894		H3BQ85	93 aa		9.06	□□□□□ -0.96

Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms