RNA–Protein interactions for RNA: ENST00000479320.5

HLA-A-206, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,334 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-206ENST00000479320 LINC00242Q5T6M2 205 aa11.09□□□□□ -0.63
HLA-A-206ENST00000479320 C2orf82Q6UX34 121 aa11.09□□□□□ -0.63
HLA-A-206ENST00000479320 HMCN2Q8NDA2 5059 aa11.08□□□□□ -0.64
HLA-A-206ENST00000479320 A0A1W2PNN7 141 aa11.08□□□□□ -0.64
HLA-A-206ENST00000479320 A0A087WZ39 114 aa11.07□□□□□ -0.64
HLA-A-206ENST00000479320 F8WDY8 70 aa11.07□□□□□ -0.64
HLA-A-206ENST00000479320 HERV-K104P63124 156 aa11.07□□□□□ -0.64
HLA-A-206ENST00000479320 RPL18AQ02543 176 aaKnown RBP11.07□□□□□ -0.64
HLA-A-206ENST00000479320 Q1RN00 199 aa11.07□□□□□ -0.64
HLA-A-206ENST00000479320 PPDPFQ9H3Y8 114 aa11.07□□□□□ -0.64
HLA-A-206ENST00000479320 NDUFA1O15239 70 aa11.06□□□□□ -0.64
HLA-A-206ENST00000479320 MEIG1Q5JSS6 88 aa11.06□□□□□ -0.64
HLA-A-206ENST00000479320 C10orf25Q5T742 122 aa11.06□□□□□ -0.64
HLA-A-206ENST00000479320 SFTA2Q6UW10 78 aa11.06□□□□□ -0.64
HLA-A-206ENST00000479320 MUSTN1Q8IVN3 82 aa11.06□□□□□ -0.64
HLA-A-206ENST00000479320 COPS9Q8WXC6 57 aa11.06□□□□□ -0.64
HLA-A-206ENST00000479320 LST1O00453 97 aa11.05□□□□□ -0.64
HLA-A-206ENST00000479320 C9orf116Q5BN46 136 aaPredicted RBP11.05□□□□□ -0.64
HLA-A-206ENST00000479320 UNQ6190/PRO20217Q6UXQ8 127 aa11.05□□□□□ -0.64
HLA-A-206ENST00000479320 SMIM20Q8N5G0 67 aa11.05□□□□□ -0.64
HLA-A-206ENST00000479320 ZNF22P17026 224 aaPredicted RBP11.04□□□□□ -0.64
HLA-A-206ENST00000479320 CXCL5P42830 114 aa11.04□□□□□ -0.64
HLA-A-206ENST00000479320 KIAA0087Q14695 138 aa11.04□□□□□ -0.64
HLA-A-206ENST00000479320 Q6ZRP5 223 aa11.04□□□□□ -0.64
HLA-A-206ENST00000479320 TRIAP1O43715 76 aa11.03□□□□□ -0.64
HLA-A-206ENST00000479320 EIF4EBP3O60516 100 aaPredicted RBP11.03□□□□□ -0.64
HLA-A-206ENST00000479320 C6orf48Q9UBA6 75 aa11.03□□□□□ -0.64
HLA-A-206ENST00000479320 A0A1B0GX51 115 aa11.02□□□□□ -0.65
HLA-A-206ENST00000479320 LINC00643Q86TS7 51 aa11.02□□□□□ -0.65
HLA-A-206ENST00000479320 TEX49A0A1B0GTD5 131 aa11.01□□□□□ -0.65
HLA-A-206ENST00000479320 TLX1NBP0CAT3 122 aa11.01□□□□□ -0.65
HLA-A-206ENST00000479320 SPINK6Q6UWN8 80 aa11.01□□□□□ -0.65
HLA-A-206ENST00000479320 UQCRQO14949 82 aa11□□□□□ -0.65
HLA-A-206ENST00000479320 LINC01561Q8N1V8 128 aa11□□□□□ -0.65
HLA-A-206ENST00000479320 PHF5AQ7RTV0 110 aaKnown RBP10.99□□□□□ -0.65
HLA-A-206ENST00000479320 FAM19A3Q7Z5A8 133 aa10.99□□□□□ -0.65
HLA-A-206ENST00000479320 LITAFQ99732 161 aa10.99□□□□□ -0.65
HLA-A-206ENST00000479320 TNXBP22105 4242 aa10.99□□□□□ -0.65
HLA-A-206ENST00000479320 RPS28P62857 69 aaKnown RBP10.98□□□□□ -0.65
HLA-A-206ENST00000479320 C3orf22Q8N5N4 141 aa10.98□□□□□ -0.65
HLA-A-206ENST00000479320 PLA2G2DQ9UNK4 145 aa10.98□□□□□ -0.65
HLA-A-206ENST00000479320 DAND5Q8N907 189 aa10.97□□□□□ -0.65
HLA-A-206ENST00000479320 PSORS1C2Q9UIG4 136 aa10.97□□□□□ -0.65
HLA-A-206ENST00000479320 TINCRA0A1B0GVN0 87 aa10.96□□□□□ -0.65
HLA-A-206ENST00000479320 FAM168BA1KXE4 195 aa10.96□□□□□ -0.65
HLA-A-206ENST00000479320 TRACP01848 142 aa10.94□□□□□ -0.66
HLA-A-206ENST00000479320 HERVK_113P63121 156 aa10.94□□□□□ -0.66
HLA-A-206ENST00000479320 REG3GQ6UW15 175 aa10.94□□□□□ -0.66
HLA-A-206ENST00000479320 PRSS2P07478 247 aa10.93□□□□□ -0.66
HLA-A-206ENST00000479320 TOMM7Q9P0U1 55 aa10.93□□□□□ -0.66
HLA-A-206ENST00000479320 CDKN2A-AS1Q9UH64 79 aa10.93□□□□□ -0.66
HLA-A-206ENST00000479320 NDUFA12Q9UI09 145 aa10.93□□□□□ -0.66
HLA-A-206ENST00000479320 NDUFC2-KCTD14E9PQ53 114 aa10.92□□□□□ -0.66
HLA-A-206ENST00000479320 H7C2G1 150 aa10.92□□□□□ -0.66
HLA-A-206ENST00000479320 J3KT08 172 aa10.92□□□□□ -0.66
HLA-A-206ENST00000479320 C6orf226Q5I0X4 101 aa10.92□□□□□ -0.66
HLA-A-206ENST00000479320 C1orf137Q5JT78 98 aa10.92□□□□□ -0.66
HLA-A-206ENST00000479320 FAM19A5Q7Z5A7 132 aaPredicted RBP10.92□□□□□ -0.66
HLA-A-206ENST00000479320 KRTAP7-1Q8IUC3 87 aa10.92□□□□□ -0.66
HLA-A-206ENST00000479320 Q8IZM0 81 aa10.92□□□□□ -0.66
HLA-A-206ENST00000479320 KRTAP10-8P60410 259 aa10.9□□□□□ -0.66
HLA-A-206ENST00000479320 C5orf47Q569G3 176 aa10.9□□□□□ -0.66
HLA-A-206ENST00000479320 C9orf153Q5TBE3 101 aa10.9□□□□□ -0.66
HLA-A-206ENST00000479320 KRTAP11-1Q8IUC1 163 aa10.9□□□□□ -0.66
HLA-A-206ENST00000479320 ATOX1O00244 68 aa10.89□□□□□ -0.67
HLA-A-206ENST00000479320 C9orf129Q5T035 196 aaKnown RBP10.89□□□□□ -0.67
HLA-A-206ENST00000479320 IGLV5-45A0A087WSX0 123 aa10.88□□□□□ -0.67
HLA-A-206ENST00000479320 FAM236AA0A1B0GUQ0 79 aa10.88□□□□□ -0.67
HLA-A-206ENST00000479320 FAM236BA0A1B0GV22 79 aa10.88□□□□□ -0.67
HLA-A-206ENST00000479320 CRYGAP11844 174 aa10.88□□□□□ -0.67
HLA-A-206ENST00000479320 COX7CP15954 63 aa10.87□□□□□ -0.67
HLA-A-206ENST00000479320 IGLV7-43P04211 117 aa10.86□□□□□ -0.67
HLA-A-206ENST00000479320 HIST1H4AP62805 103 aaKnown RBP10.86□□□□□ -0.67
HLA-A-206ENST00000479320 SMIM1B2RUZ4 78 aa10.84□□□□□ -0.67
HLA-A-206ENST00000479320 OR13C6PQ8NH95 151 aa10.84□□□□□ -0.67
HLA-A-206ENST00000479320 UBE2BP63146 152 aa10.83□□□□□ -0.68
HLA-A-206ENST00000479320 ADAMTSL4-AS1Q5T5F5 129 aa10.83□□□□□ -0.68
HLA-A-206ENST00000479320 CLEC2BQ92478 149 aa10.83□□□□□ -0.68
HLA-A-206ENST00000479320 COX7B2Q8TF08 81 aa10.82□□□□□ -0.68
HLA-A-206ENST00000479320 DIRC1Q969H9 104 aa10.82□□□□□ -0.68
HLA-A-206ENST00000479320 XAGE1AQ9HD64 81 aa10.82□□□□□ -0.68
HLA-A-206ENST00000479320 TMEM258P61165 79 aa10.81□□□□□ -0.68
HLA-A-206ENST00000479320 IGLV5-39A0A0G2JS06 123 aa10.8□□□□□ -0.68
HLA-A-206ENST00000479320 LINC00308Q8TCZ7 52 aa10.8□□□□□ -0.68
HLA-A-206ENST00000479320 C22orf24Q9Y442 160 aa10.8□□□□□ -0.68
HLA-A-206ENST00000479320 H0Y9J4 135 aa10.79□□□□□ -0.68
HLA-A-206ENST00000479320 GAGE2AQ6NT46 116 aa10.79□□□□□ -0.68
HLA-A-206ENST00000479320 Q6JHZ5 121 aa10.78□□□□□ -0.68
HLA-A-206ENST00000479320 TRAV13-2A0A0B4J235 113 aa10.77□□□□□ -0.69
HLA-A-206ENST00000479320 BAALC-AS2P0C853 105 aa10.77□□□□□ -0.69
HLA-A-206ENST00000479320 RPL28P46779 137 aaKnown RBP10.75□□□□□ -0.69
HLA-A-206ENST00000479320 PRR26Q8N8Z3 221 aa10.74□□□□□ -0.69
HLA-A-206ENST00000479320 SMCR5Q8TEV8 140 aa10.74□□□□□ -0.69
HLA-A-206ENST00000479320 H0YGX0 51 aa10.73□□□□□ -0.69
HLA-A-206ENST00000479320 S100A7L2Q5SY68 101 aa10.73□□□□□ -0.69
HLA-A-206ENST00000479320 ATP5EP2Q5VTU8 51 aa10.73□□□□□ -0.69
HLA-A-206ENST00000479320 SERP2Q8N6R1 65 aa10.73□□□□□ -0.69
HLA-A-206ENST00000479320 LRP2P98164 4655 aa10.72□□□□□ -0.69
HLA-A-206ENST00000479320 MRPL55Q7Z7F7 128 aaKnown RBP10.72□□□□□ -0.69
HLA-A-206ENST00000479320 OBSCN-AS1Q96MR7 158 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms