RNA–Protein interactions for RNA: ENST00000479099.2

RC3H1-204, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-204ENST00000479099 CRIP1P50238 77 aa2.31□□□□□ -2.04
RC3H1-204ENST00000479099 PIGYQ3MUY2 71 aa2.31□□□□□ -2.04
RC3H1-204ENST00000479099 KRTAP12-4P60329 112 aa2.3□□□□□ -2.04
RC3H1-204ENST00000479099 LCE3DQ9BYE3 92 aa2.3□□□□□ -2.04
RC3H1-204ENST00000479099 NFAT5O94916 1531 aa2.3□□□□□ -2.04
RC3H1-204ENST00000479099 FAM208BQ5VWN6 2430 aa2.3□□□□□ -2.04
RC3H1-204ENST00000479099 JMJD1CQ15652 2540 aa2.3□□□□□ -2.04
RC3H1-204ENST00000479099 DDX60Q8IY21 1712 aaKnown RBP2.29□□□□□ -2.04
RC3H1-204ENST00000479099 CDC42BPAQ5VT25 1732 aa2.28□□□□□ -2.04
RC3H1-204ENST00000479099 KRTAP5-8O75690 187 aa2.28□□□□□ -2.04
RC3H1-204ENST00000479099 MRPL34Q9BQ48 92 aaKnown RBP2.28□□□□□ -2.04
RC3H1-204ENST00000479099 CNFNQ9BYD5 112 aa2.28□□□□□ -2.04
RC3H1-204ENST00000479099 C4AP0C0L4 1744 aa2.28□□□□□ -2.05
RC3H1-204ENST00000479099 H0YGX0 51 aa2.27□□□□□ -2.05
RC3H1-204ENST00000479099 COX6B2Q6YFQ2 88 aa2.27□□□□□ -2.05
RC3H1-204ENST00000479099 ATP7AQ04656 1500 aa2.27□□□□□ -2.05
RC3H1-204ENST00000479099 CACNA1EQ15878 2313 aa2.26□□□□□ -2.05
RC3H1-204ENST00000479099 C4BP0C0L5 1744 aa2.26□□□□□ -2.05
RC3H1-204ENST00000479099 C10orf95Q9H7T3 257 aa2.26□□□□□ -2.05
RC3H1-204ENST00000479099 CDKN2A-AS1Q9UH64 79 aa2.25□□□□□ -2.05
RC3H1-204ENST00000479099 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.24□□□□□ -2.05
RC3H1-204ENST00000479099 J3QKU1 62 aa2.24□□□□□ -2.05
RC3H1-204ENST00000479099 COX6A2Q02221 97 aa2.24□□□□□ -2.05
RC3H1-204ENST00000479099 CNOT1A5YKK6 2376 aaKnown RBP2.24□□□□□ -2.05
RC3H1-204ENST00000479099 IQGAP1P46940 1657 aa2.24□□□□□ -2.05
RC3H1-204ENST00000479099 BPTFQ12830 3046 aa2.23□□□□□ -2.05
RC3H1-204ENST00000479099 SPINK9Q5DT21 86 aa2.23□□□□□ -2.05
RC3H1-204ENST00000479099 CCL22O00626 93 aa2.22□□□□□ -2.05
RC3H1-204ENST00000479099 OTOGLQ3ZCN5 2332 aa2.21□□□□□ -2.06
RC3H1-204ENST00000479099 Q8IZM0 81 aa2.21□□□□□ -2.06
RC3H1-204ENST00000479099 LINC00158P58513 81 aa2.2□□□□□ -2.06
RC3H1-204ENST00000479099 SAMD9LQ8IVG5 1584 aa2.19□□□□□ -2.06
RC3H1-204ENST00000479099 NDUFA3O95167 84 aa2.18□□□□□ -2.06
RC3H1-204ENST00000479099 PRO3102Q9H379 93 aa2.18□□□□□ -2.06
RC3H1-204ENST00000479099 PRO0255Q9UI72 69 aa2.18□□□□□ -2.06
RC3H1-204ENST00000479099 DOPEY2Q9Y3R5 2298 aa2.17□□□□□ -2.06
RC3H1-204ENST00000479099 KIF21BO75037 1637 aa2.17□□□□□ -2.06
RC3H1-204ENST00000479099 LYNX1G3V0Z9 82 aa2.17□□□□□ -2.06
RC3H1-204ENST00000479099 SPINK4O60575 86 aa2.17□□□□□ -2.06
RC3H1-204ENST00000479099 TIMM8BQ9Y5J9 83 aaPredicted RBP2.17□□□□□ -2.06
RC3H1-204ENST00000479099 SORL1Q92673 2214 aa2.17□□□□□ -2.06
RC3H1-204ENST00000479099 RP1L1Q8IWN7 2480 aaPredicted RBP2.16□□□□□ -2.06
RC3H1-204ENST00000479099 Q6ZSA8 131 aa2.15□□□□□ -2.07
RC3H1-204ENST00000479099 TMEM167BQ9NRX6 74 aa2.15□□□□□ -2.07
RC3H1-204ENST00000479099 LMO7Q8WWI1 1683 aa2.15□□□□□ -2.07
RC3H1-204ENST00000479099 PIEZO2Q9H5I5 2752 aa2.15□□□□□ -2.07
RC3H1-204ENST00000479099 LOC730098B7Z3J9 87 aa2.14□□□□□ -2.07
RC3H1-204ENST00000479099 H0YAA0 97 aa2.13□□□□□ -2.07
RC3H1-204ENST00000479099 COL6A6A6NMZ7 2263 aa2.12□□□□□ -2.07
RC3H1-204ENST00000479099 Q5VSD8 79 aa2.12□□□□□ -2.07
RC3H1-204ENST00000479099 A0A0D9SG42 100 aa2.11□□□□□ -2.07
RC3H1-204ENST00000479099 SPRR1AP35321 89 aa2.11□□□□□ -2.07
RC3H1-204ENST00000479099 PLCE1Q9P212 2302 aa2.1□□□□□ -2.07
RC3H1-204ENST00000479099 LELP1Q5T871 98 aa2.1□□□□□ -2.07
RC3H1-204ENST00000479099 LINC00308Q8TCZ7 52 aa2.1□□□□□ -2.07
RC3H1-204ENST00000479099 ROS1P08922 2347 aa2.09□□□□□ -2.07
RC3H1-204ENST00000479099 PTPRZ1P23471 2315 aaPredicted RBP2.08□□□□□ -2.08
RC3H1-204ENST00000479099 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
RC3H1-204ENST00000479099 KRTAP5-7Q6L8G8 165 aa2.08□□□□□ -2.08
RC3H1-204ENST00000479099 ASH1LQ9NR48 2969 aaKnown RBP2.07□□□□□ -2.08
RC3H1-204ENST00000479099 SNRPGP62308 76 aaKnown RBP2.07□□□□□ -2.08
RC3H1-204ENST00000479099 KRTAP21-3Q3LHN1 58 aa2.07□□□□□ -2.08
RC3H1-204ENST00000479099 KRTAP12-3P60328 96 aa2.06□□□□□ -2.08
RC3H1-204ENST00000479099 PTPRQQ9UMZ3 2332 aa2.05□□□□□ -2.08
RC3H1-204ENST00000479099 PRB3Q04118 309 aaPredicted RBP2.05□□□□□ -2.08
RC3H1-204ENST00000479099 H1FX-AS1Q4G0G2 97 aa2.05□□□□□ -2.08
RC3H1-204ENST00000479099 MINOS1Q5TGZ0 78 aa2.05□□□□□ -2.08
RC3H1-204ENST00000479099 USF3Q68DE3 2245 aa2.04□□□□□ -2.08
RC3H1-204ENST00000479099 DEFB105AQ8NG35 78 aa2.04□□□□□ -2.08
RC3H1-204ENST00000479099 APLNQ9ULZ1 77 aa2.04□□□□□ -2.08
RC3H1-204ENST00000479099 KRTAP10-4P60372 401 aaPredicted RBP2.03□□□□□ -2.08
RC3H1-204ENST00000479099 ALMS1Q8TCU4 4167 aa2.02□□□□□ -2.09
RC3H1-204ENST00000479099 DUOX1Q9NRD9 1551 aa2.02□□□□□ -2.09
RC3H1-204ENST00000479099 SPRR1BP22528 89 aa2.02□□□□□ -2.09
RC3H1-204ENST00000479099 TRIOBPQ9H2D6 2365 aa2.01□□□□□ -2.09
RC3H1-204ENST00000479099 WFDC13Q8IUB5 93 aa2.01□□□□□ -2.09
RC3H1-204ENST00000479099 C6orf48Q9UBA6 75 aa2.01□□□□□ -2.09
RC3H1-204ENST00000479099 C2CD3Q4AC94 2353 aa2□□□□□ -2.09
RC3H1-204ENST00000479099 MROH2BQ7Z745 1585 aa2□□□□□ -2.09
RC3H1-204ENST00000479099 HIVEP2P31629 2446 aa1.99□□□□□ -2.09
RC3H1-204ENST00000479099 IAPPP10997 89 aa1.98□□□□□ -2.09
RC3H1-204ENST00000479099 TFF3Q07654 80 aa1.98□□□□□ -2.09
RC3H1-204ENST00000479099 SMIM2Q9BVW6 85 aa1.98□□□□□ -2.09
RC3H1-204ENST00000479099 DEFB130BP0DP73 79 aa1.95□□□□□ -2.1
RC3H1-204ENST00000479099 DEFB130AP0DP74 79 aa1.95□□□□□ -2.1
RC3H1-204ENST00000479099 RPS27P42677 84 aaKnown RBP1.94□□□□□ -2.1
RC3H1-204ENST00000479099 RPS27LQ71UM5 84 aaKnown RBP1.94□□□□□ -2.1
RC3H1-204ENST00000479099 HMCN1Q96RW7 5635 aa1.93□□□□□ -2.1
RC3H1-204ENST00000479099 ZNF462Q96JM2 2506 aa1.92□□□□□ -2.1
RC3H1-204ENST00000479099 GCC2Q8IWJ2 1684 aa1.92□□□□□ -2.1
RC3H1-204ENST00000479099 NDUFA1O15239 70 aa1.91□□□□□ -2.1
RC3H1-204ENST00000479099 SPTBN2O15020 2390 aa1.91□□□□□ -2.1
RC3H1-204ENST00000479099 CACNA1HO95180 2353 aa1.9□□□□□ -2.11
RC3H1-204ENST00000479099 KLK9Q2XQG4 91 aa1.9□□□□□ -2.11
RC3H1-204ENST00000479099 WNK2Q9Y3S1 2297 aa1.88□□□□□ -2.11
RC3H1-204ENST00000479099 PKDREJQ9NTG1 2253 aa1.87□□□□□ -2.11
RC3H1-204ENST00000479099 MEGF8Q7Z7M0 2845 aa1.86□□□□□ -2.11
RC3H1-204ENST00000479099 CLTCL1P53675 1640 aa1.86□□□□□ -2.11
RC3H1-204ENST00000479099 SPTBN1Q01082 2364 aaKnown RBP1.84□□□□□ -2.11
RC3H1-204ENST00000479099 WT1-ASQ06250 92 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms