RNA–Protein interactions for RNA: ENST00000478911.1

SUPT20H-215, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 3

Gene SUPT20H, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-215ENST00000478911 HECTD1Q9ULT8 2610 aa-0.88□□□□□ -2.55
SUPT20H-215ENST00000478911 ADAMTS12P58397 1594 aa-0.88□□□□□ -2.55
SUPT20H-215ENST00000478911 BCORQ6W2J9 1755 aa-0.88□□□□□ -2.55
SUPT20H-215ENST00000478911 LAMA2P24043 3122 aaKnown RBP-0.89□□□□□ -2.55
SUPT20H-215ENST00000478911 FANCAO15360 1455 aa-0.89□□□□□ -2.55
SUPT20H-215ENST00000478911 FASNP49327 2511 aaKnown RBP-0.89□□□□□ -2.55
SUPT20H-215ENST00000478911 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.89□□□□□ -2.55
SUPT20H-215ENST00000478911 COX7BP24311 80 aa-0.9□□□□□ -2.55
SUPT20H-215ENST00000478911 NMSQ5H8A3 153 aa-0.9□□□□□ -2.55
SUPT20H-215ENST00000478911 ABCC10Q5T3U5 1492 aa-0.91□□□□□ -2.55
SUPT20H-215ENST00000478911 ATP10BO94823 1461 aa-0.92□□□□□ -2.56
SUPT20H-215ENST00000478911 NBPF19A0A087WUL8 3843 aa-0.92□□□□□ -2.56
SUPT20H-215ENST00000478911 CICQ96RK0 1608 aaPredicted RBP-0.92□□□□□ -2.56
SUPT20H-215ENST00000478911 H0YGG7 62 aa-0.92□□□□□ -2.56
SUPT20H-215ENST00000478911 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.92□□□□□ -2.562e-11■■■■■ 43
SUPT20H-215ENST00000478911 QSER1Q2KHR3 1735 aa-0.92□□□□□ -2.56
SUPT20H-215ENST00000478911 MYH4Q9Y623 1939 aa-0.93□□□□□ -2.56
SUPT20H-215ENST00000478911 HMGN2P05204 90 aaKnown RBP-0.93□□□□□ -2.56
SUPT20H-215ENST00000478911 SNHG12Q9BXW3 62 aa-0.93□□□□□ -2.56
SUPT20H-215ENST00000478911 PKD1L3Q7Z443 1732 aa-0.93□□□□□ -2.56
SUPT20H-215ENST00000478911 NBASA2RRP1 2371 aa-0.93□□□□□ -2.56
SUPT20H-215ENST00000478911 DNAH6Q9C0G6 4158 aa-0.93□□□□□ -2.56
SUPT20H-215ENST00000478911 MYO18BQ8IUG5 2567 aa-0.94□□□□□ -2.56
SUPT20H-215ENST00000478911 DNHD1Q96M86 4753 aa-0.94□□□□□ -2.56
SUPT20H-215ENST00000478911 UBR3Q6ZT12 1888 aa-0.94□□□□□ -2.56
SUPT20H-215ENST00000478911 VPS8Q8N3P4 1428 aa-0.94□□□□□ -2.56
SUPT20H-215ENST00000478911 COX6B2Q6YFQ2 88 aa-0.94□□□□□ -2.56
SUPT20H-215ENST00000478911 C20orf78Q9BR46 151 aa-0.94□□□□□ -2.56
SUPT20H-215ENST00000478911 RGPD2P0DJD1 1756 aa-0.94□□□□□ -2.56
SUPT20H-215ENST00000478911 PKD1P98161 4303 aa-0.95□□□□□ -2.56
SUPT20H-215ENST00000478911 KNL1Q8NG31 2342 aa-0.95□□□□□ -2.56
SUPT20H-215ENST00000478911 MUC17Q685J3 4493 aa-0.95□□□□□ -2.56
SUPT20H-215ENST00000478911 ALKQ9UM73 1620 aa-0.95□□□□□ -2.56
SUPT20H-215ENST00000478911 A0A1B0GUT8 65 aa-0.95□□□□□ -2.56
SUPT20H-215ENST00000478911 GYPAP02724 150 aa-0.95□□□□□ -2.56
SUPT20H-215ENST00000478911 SMIM11AP58511 58 aa-0.95□□□□□ -2.56
SUPT20H-215ENST00000478911 PREX1Q8TCU6 1659 aa-0.95□□□□□ -2.56
SUPT20H-215ENST00000478911 LRRC7Q96NW7 1537 aa-0.95□□□□□ -2.56
SUPT20H-215ENST00000478911 PRRC2CQ9Y520 2896 aaKnown RBP-0.95□□□□□ -2.56
SUPT20H-215ENST00000478911 REV3LO60673 3130 aa-0.96□□□□□ -2.56
SUPT20H-215ENST00000478911 NDUFA3O95167 84 aa-0.96□□□□□ -2.56
SUPT20H-215ENST00000478911 PLGLAQ15195 96 aa-0.96□□□□□ -2.56
SUPT20H-215ENST00000478911 USP9XQ93008 2570 aaPredicted RBP-0.97□□□□□ -2.56
SUPT20H-215ENST00000478911 ATP7BP35670 1465 aa-0.97□□□□□ -2.56
SUPT20H-215ENST00000478911 LRRC9Q6ZRR7 1453 aa-0.97□□□□□ -2.56
SUPT20H-215ENST00000478911 ANKRD26Q9UPS8 1709 aa-0.97□□□□□ -2.56
SUPT20H-215ENST00000478911 PKIAP61925 76 aa-0.97□□□□□ -2.56
SUPT20H-215ENST00000478911 RPL38P63173 70 aaKnown RBP-0.97□□□□□ -2.56
SUPT20H-215ENST00000478911 PEA15Q15121 130 aa-0.97□□□□□ -2.56
SUPT20H-215ENST00000478911 GAFA1Q96PS6 74 aa-0.97□□□□□ -2.56
SUPT20H-215ENST00000478911 NEXMIFQ5QGS0 1516 aa-0.98□□□□□ -2.57
SUPT20H-215ENST00000478911 IQCF6A8MYZ5 107 aa-0.98□□□□□ -2.57
SUPT20H-215ENST00000478911 S100A8P05109 93 aa-0.98□□□□□ -2.57
SUPT20H-215ENST00000478911 RGPD1P0DJD0 1748 aa-0.98□□□□□ -2.57
SUPT20H-215ENST00000478911 TROQ12816 1431 aaPredicted RBP-0.98□□□□□ -2.57
SUPT20H-215ENST00000478911 PKHD1L1Q86WI1 4243 aa-0.99□□□□□ -2.57
SUPT20H-215ENST00000478911 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.99□□□□□ -2.57
SUPT20H-215ENST00000478911 RGPD8O14715 1765 aaPredicted RBP-0.99□□□□□ -2.57
SUPT20H-215ENST00000478911 RGPD5Q99666 1765 aa-0.99□□□□□ -2.57
SUPT20H-215ENST00000478911 DSPP15924 2871 aaKnown RBP-0.99□□□□□ -2.57
SUPT20H-215ENST00000478911 FAT3Q8TDW7 4589 aa-0.99□□□□□ -2.57
SUPT20H-215ENST00000478911 AKAP13Q12802 2813 aa-1□□□□□ -2.57
SUPT20H-215ENST00000478911 MYO3AQ8NEV4 1616 aa-1□□□□□ -2.57
SUPT20H-215ENST00000478911 LAMA1P25391 3075 aa-1.01□□□□□ -2.57
SUPT20H-215ENST00000478911 CYB5AP00167 134 aa-1.01□□□□□ -2.57
SUPT20H-215ENST00000478911 AKAP9Q99996 3911 aa-1.01□□□□□ -2.57
SUPT20H-215ENST00000478911 CEP162Q5TB80 1403 aa-1.01□□□□□ -2.57
SUPT20H-215ENST00000478911 NIPBLQ6KC79 2804 aaeCLIP-1.02□□□□□ -2.57
SUPT20H-215ENST00000478911 TRANK1O15050 2925 aa-1.02□□□□□ -2.57
SUPT20H-215ENST00000478911 TNRC18O15417 2968 aaPredicted RBP-1.02□□□□□ -2.57
SUPT20H-215ENST00000478911 ZZEF1O43149 2961 aa-1.02□□□□□ -2.57
SUPT20H-215ENST00000478911 TRAV21A0A0B4J279 112 aa-1.02□□□□□ -2.57
SUPT20H-215ENST00000478911 AKAP12Q02952 1782 aa-1.02□□□□□ -2.57
SUPT20H-215ENST00000478911 SPRR2FQ96RM1 72 aa-1.02□□□□□ -2.57
SUPT20H-215ENST00000478911 CELSR3Q9NYQ7 3312 aa-1.02□□□□□ -2.57
SUPT20H-215ENST00000478911 UBR1Q8IWV7 1749 aa-1.03□□□□□ -2.57
SUPT20H-215ENST00000478911 C4AP0C0L4 1744 aa-1.03□□□□□ -2.58
SUPT20H-215ENST00000478911 C4BP0C0L5 1744 aa-1.03□□□□□ -2.58
SUPT20H-215ENST00000478911 DNAH3Q8TD57 4116 aa-1.04□□□□□ -2.58
SUPT20H-215ENST00000478911 MT1AP04731 61 aa-1.04□□□□□ -2.58
SUPT20H-215ENST00000478911 WDR87Q6ZQQ6 2873 aa-1.04□□□□□ -2.58
SUPT20H-215ENST00000478911 ACACAQ13085 2346 aa-1.05□□□□□ -2.58
SUPT20H-215ENST00000478911 MYMXA0A1B0GTQ4 84 aa-1.05□□□□□ -2.58
SUPT20H-215ENST00000478911 TNRC6CQ9HCJ0 1690 aaKnown RBP-1.05□□□□□ -2.58
SUPT20H-215ENST00000478911 ANKRD11Q6UB99 2663 aaPredicted RBP-1.05□□□□□ -2.58
SUPT20H-215ENST00000478911 PLECQ15149 4684 aaKnown RBP-1.06□□□□□ -2.58
SUPT20H-215ENST00000478911 PYY3Q5JQD4 70 aa-1.06□□□□□ -2.58
SUPT20H-215ENST00000478911 WFDC9Q8NEX5 89 aa-1.06□□□□□ -2.58
SUPT20H-215ENST00000478911 DMXL1Q9Y485 3027 aa-1.06□□□□□ -2.58
SUPT20H-215ENST00000478911 VPS13DQ5THJ4 4388 aa-1.06□□□□□ -2.58
SUPT20H-215ENST00000478911 PDE4DIPQ5VU43 2346 aa-1.06□□□□□ -2.58
SUPT20H-215ENST00000478911 SUPT6HQ7KZ85 1726 aaKnown RBP-1.06□□□□□ -2.58
SUPT20H-215ENST00000478911 KALRNO60229 2985 aa-1.07□□□□□ -2.58
SUPT20H-215ENST00000478911 COL6A5A8TX70 2615 aa-1.07□□□□□ -2.58
SUPT20H-215ENST00000478911 DNAH2Q9P225 4427 aa-1.07□□□□□ -2.58
SUPT20H-215ENST00000478911 COL12A1Q99715 3063 aa-1.07□□□□□ -2.58
SUPT20H-215ENST00000478911 H3BNG1 76 aa-1.07□□□□□ -2.58
SUPT20H-215ENST00000478911 NBEAL2Q6ZNJ1 2754 aa-1.08□□□□□ -2.58
SUPT20H-215ENST00000478911 USP32Q8NFA0 1604 aa-1.08□□□□□ -2.58
SUPT20H-215ENST00000478911 TIAM2Q8IVF5 1701 aa-1.09□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms