RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 TRAV13-2A0A0B4J235 113 aa12.12□□□□□ -0.47
ACTB-210ENST00000477812 ZNF861PO60384 105 aa12.12□□□□□ -0.47
ACTB-210ENST00000477812 SPINK6Q6UWN8 80 aa12.12□□□□□ -0.47
ACTB-210ENST00000477812 FLG2Q5D862 2391 aaPredicted RBP12.12□□□□□ -0.47
ACTB-210ENST00000477812 PCLOQ9Y6V0 5065 aa12.11□□□□□ -0.47
ACTB-210ENST00000477812 A6NDN8 102 aa12.11□□□□□ -0.47
ACTB-210ENST00000477812 INAFM2P0DMQ5 153 aa12.11□□□□□ -0.47
ACTB-210ENST00000477812 PRLHP81277 87 aa12.11□□□□□ -0.47
ACTB-210ENST00000477812 ZNF73O43830 326 aaPredicted RBP12.1□□□□□ -0.47
ACTB-210ENST00000477812 CFC1BP0CG36 223 aa12.1□□□□□ -0.47
ACTB-210ENST00000477812 CFC1P0CG37 223 aa12.1□□□□□ -0.47
ACTB-210ENST00000477812 FAM19A1Q7Z5A9 133 aa12.1□□□□□ -0.47
ACTB-210ENST00000477812 H0Y9J4 135 aa12.09□□□□□ -0.47
ACTB-210ENST00000477812 RPL28P46779 137 aaKnown RBP12.09□□□□□ -0.47
ACTB-210ENST00000477812 CBY1Q9Y3M2 126 aa12.09□□□□□ -0.47
ACTB-210ENST00000477812 MYCBP2O75592 4640 aa12.08□□□□□ -0.48
ACTB-210ENST00000477812 A0A0B4J2C4 111 aa12.08□□□□□ -0.48
ACTB-210ENST00000477812 PCP4L1A6NKN8 68 aa12.08□□□□□ -0.48
ACTB-210ENST00000477812 B5MCH6 92 aa12.08□□□□□ -0.48
ACTB-210ENST00000477812 UBE2AP49459 152 aa12.08□□□□□ -0.48
ACTB-210ENST00000477812 TMEM238LA0A1B0GVL6 79 aa12.06□□□□□ -0.48
ACTB-210ENST00000477812 ETDCA0A1B0GVM5 59 aa12.06□□□□□ -0.48
ACTB-210ENST00000477812 A6NJY4 79 aa12.06□□□□□ -0.48
ACTB-210ENST00000477812 DIRC1Q969H9 104 aa12.06□□□□□ -0.48
ACTB-210ENST00000477812 RPL13AP40429 203 aaKnown RBP12.05□□□□□ -0.48
ACTB-210ENST00000477812 Q6ZRX8 168 aa12.05□□□□□ -0.48
ACTB-210ENST00000477812 SMIM11BQ8TCY0 68 aa12.05□□□□□ -0.48
ACTB-210ENST00000477812 CTAG1AP78358 180 aa12.04□□□□□ -0.48
ACTB-210ENST00000477812 C6orf99Q4VX62 202 aa12.04□□□□□ -0.48
ACTB-210ENST00000477812 A0A1B0GWB2 263 aa12.03□□□□□ -0.48
ACTB-210ENST00000477812 BVES-AS1Q5T3Y7 98 aa12.03□□□□□ -0.48
ACTB-210ENST00000477812 LRP1Q07954 4544 aaKnown RBP12.03□□□□□ -0.48
ACTB-210ENST00000477812 SMCR5Q8TEV8 140 aa12.02□□□□□ -0.49
ACTB-210ENST00000477812 Q9BRP9 147 aa12.02□□□□□ -0.49
ACTB-210ENST00000477812 M0R143 59 aa12.01□□□□□ -0.49
ACTB-210ENST00000477812 RAB37Q96AX2 223 aa12.01□□□□□ -0.49
ACTB-210ENST00000477812 FAT3Q8TDW7 4589 aa12.01□□□□□ -0.49
ACTB-210ENST00000477812 TRBV7-6A0A0J9YX20 115 aa12□□□□□ -0.49
ACTB-210ENST00000477812 ELOF1P60002 83 aaKnown RBP12□□□□□ -0.49
ACTB-210ENST00000477812 NHP2Q9NX24 153 aaKnown RBP12□□□□□ -0.49
ACTB-210ENST00000477812 KRTAP1-4P0C5Y4 121 aa11.99□□□□□ -0.49
ACTB-210ENST00000477812 HIGD2AQ9BW72 106 aa11.99□□□□□ -0.49
ACTB-210ENST00000477812 PRO1854Q9UHT4 67 aa11.99□□□□□ -0.49
ACTB-210ENST00000477812 K7ERJ3 54 aa11.98□□□□□ -0.49
ACTB-210ENST00000477812 COX7BP24311 80 aa11.97□□□□□ -0.49
ACTB-210ENST00000477812 HINT1P49773 126 aaPredicted RBP11.97□□□□□ -0.49
ACTB-210ENST00000477812 ERC2-IT1O76042 136 aa11.96□□□□□ -0.49
ACTB-210ENST00000477812 H7C2G1 150 aa11.94□□□□□ -0.5
ACTB-210ENST00000477812 KRTAP29-1A8MX34 341 aaPredicted RBP11.91□□□□□ -0.5
ACTB-210ENST00000477812 OXTP01178 125 aa11.91□□□□□ -0.5
ACTB-210ENST00000477812 LINC01600Q96MT4 127 aa11.91□□□□□ -0.5
ACTB-210ENST00000477812 DHRS4-AS1Q9P1J3 65 aa11.91□□□□□ -0.5
ACTB-210ENST00000477812 SPRR4Q96PI1 79 aa11.9□□□□□ -0.5
ACTB-210ENST00000477812 TSPAN13O95857 204 aa11.88□□□□□ -0.51
ACTB-210ENST00000477812 MT1HL1P0DM35 61 aa11.88□□□□□ -0.51
ACTB-210ENST00000477812 VAMP3Q15836 100 aa11.88□□□□□ -0.51
ACTB-210ENST00000477812 Q1RN00 199 aa11.88□□□□□ -0.51
ACTB-210ENST00000477812 BATFQ16520 125 aa11.87□□□□□ -0.51
ACTB-210ENST00000477812 SNHG12Q9BXW3 62 aa11.87□□□□□ -0.51
ACTB-210ENST00000477812 ZNF706Q9Y5V0 76 aaPredicted RBP11.87□□□□□ -0.51
ACTB-210ENST00000477812 TNXBP22105 4242 aa11.87□□□□□ -0.51
ACTB-210ENST00000477812 LINC00575Q6W349 94 aa11.86□□□□□ -0.51
ACTB-210ENST00000477812 ANAPC11Q9NYG5 84 aa11.86□□□□□ -0.51
ACTB-210ENST00000477812 TRIAP1O43715 76 aa11.85□□□□□ -0.51
ACTB-210ENST00000477812 LINC00483Q53H64 154 aa11.85□□□□□ -0.51
ACTB-210ENST00000477812 ST20-AS1Q8NBB2 130 aa11.85□□□□□ -0.51
ACTB-210ENST00000477812 A0A087X002 238 aa11.84□□□□□ -0.51
ACTB-210ENST00000477812 FAM229BQ4G0N7 80 aa11.84□□□□□ -0.51
ACTB-210ENST00000477812 KRTAP10-8P60410 259 aa11.83□□□□□ -0.52
ACTB-210ENST00000477812 PRR26Q8N8Z3 221 aa11.83□□□□□ -0.52
ACTB-210ENST00000477812 H0YGX0 51 aa11.81□□□□□ -0.52
ACTB-210ENST00000477812 COL5A1-AS1Q5SY13 56 aa11.81□□□□□ -0.52
ACTB-210ENST00000477812 FAM218AQ96MZ4 157 aa11.81□□□□□ -0.52
ACTB-210ENST00000477812 GAGE2AQ6NT46 116 aa11.8□□□□□ -0.52
ACTB-210ENST00000477812 DMBT1Q9UGM3 2413 aaPredicted RBP11.8□□□□□ -0.52
ACTB-210ENST00000477812 SPRR1BP22528 89 aa11.79□□□□□ -0.52
ACTB-210ENST00000477812 LINC01547P58512 204 aaPredicted RBP11.79□□□□□ -0.52
ACTB-210ENST00000477812 KRTAP13-2Q52LG2 175 aa11.79□□□□□ -0.52
ACTB-210ENST00000477812 IGLV5-48A0A075B6I7 105 aa11.78□□□□□ -0.52
ACTB-210ENST00000477812 hADV29S1A0JD25 119 aa11.78□□□□□ -0.52
ACTB-210ENST00000477812 SLC25A20O43772 301 aa11.78□□□□□ -0.52
ACTB-210ENST00000477812 CRYGAP11844 174 aa11.78□□□□□ -0.52
ACTB-210ENST00000477812 PSMB2P49721 201 aa11.77□□□□□ -0.53
ACTB-210ENST00000477812 Q6ZQY7 126 aa11.74□□□□□ -0.53
ACTB-210ENST00000477812 CLEC2BQ92478 149 aa11.74□□□□□ -0.53
ACTB-210ENST00000477812 J3QL48 77 aa11.73□□□□□ -0.53
ACTB-210ENST00000477812 COX6CP09669 75 aa11.73□□□□□ -0.53
ACTB-210ENST00000477812 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.73□□□□□ -0.53
ACTB-210ENST00000477812 C3orf22Q8N5N4 141 aa11.73□□□□□ -0.53
ACTB-210ENST00000477812 A0A1B0GX51 115 aa11.72□□□□□ -0.53
ACTB-210ENST00000477812 TEX49A0A1B0GTD5 131 aa11.71□□□□□ -0.53
ACTB-210ENST00000477812 Q8N377 158 aa11.71□□□□□ -0.53
ACTB-210ENST00000477812 DEFB105AQ8NG35 78 aa11.71□□□□□ -0.53
ACTB-210ENST00000477812 NAA38Q9BRA0 125 aaKnown RBP11.71□□□□□ -0.53
ACTB-210ENST00000477812 TAX1BP3O14907 124 aa11.7□□□□□ -0.54
ACTB-210ENST00000477812 SMIM29Q86T20 159 aa11.69□□□□□ -0.54
ACTB-210ENST00000477812 TYMSOSQ8TAI1 123 aa11.69□□□□□ -0.54
ACTB-210ENST00000477812 C9orf118A6NHY6 69 aa11.66□□□□□ -0.54
ACTB-210ENST00000477812 LST1O00453 97 aa11.65□□□□□ -0.54
ACTB-210ENST00000477812 SNCGO76070 127 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms