RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 ZNF831Q5JPB2 1677 aa1.24□□□□□ -2.21
SMNDC1-205ENST00000477763 A0A096LNT2 108 aa1.24□□□□□ -2.21
SMNDC1-205ENST00000477763 A0A1B0GWA3 101 aa1.24□□□□□ -2.21
SMNDC1-205ENST00000477763 C7orf77A4D0Y5 90 aa1.24□□□□□ -2.21
SMNDC1-205ENST00000477763 NCR3O14931 201 aa1.24□□□□□ -2.21
SMNDC1-205ENST00000477763 CFDP00746 253 aaPredicted RBP1.24□□□□□ -2.21
SMNDC1-205ENST00000477763 ARMS2P0C7Q2 107 aa1.24□□□□□ -2.21
SMNDC1-205ENST00000477763 LINC00846Q9NV44 126 aa1.24□□□□□ -2.21
SMNDC1-205ENST00000477763 PSENENQ9NZ42 101 aa1.24□□□□□ -2.21
SMNDC1-205ENST00000477763 COL12A1Q99715 3063 aa1.24□□□□□ -2.21
SMNDC1-205ENST00000477763 SPTAN1Q13813 2472 aaKnown RBP1.24□□□□□ -2.21
SMNDC1-205ENST00000477763 ARFGEF2Q9Y6D5 1785 aa1.24□□□□□ -2.21
SMNDC1-205ENST00000477763 NAV3Q8IVL0 2385 aa1.23□□□□□ -2.21
SMNDC1-205ENST00000477763 PTPRQQ9UMZ3 2332 aa1.23□□□□□ -2.21
SMNDC1-205ENST00000477763 URB1O60287 2271 aaKnown RBP1.23□□□□□ -2.21
SMNDC1-205ENST00000477763 ZFHX3Q15911 3703 aa1.23□□□□□ -2.21
SMNDC1-205ENST00000477763 CENPEQ02224 2701 aa1.23□□□□□ -2.21
SMNDC1-205ENST00000477763 TRAV1-2A0A0B4J238 106 aa1.23□□□□□ -2.21
SMNDC1-205ENST00000477763 LOC730098B7Z3J9 87 aa1.23□□□□□ -2.21
SMNDC1-205ENST00000477763 ACYP2P14621 99 aa1.23□□□□□ -2.21
SMNDC1-205ENST00000477763 GNGT1P63211 74 aa1.23□□□□□ -2.21
SMNDC1-205ENST00000477763 ESPL1Q14674 2120 aa1.23□□□□□ -2.21
SMNDC1-205ENST00000477763 SPINK13Q1W4C9 94 aa1.23□□□□□ -2.21
SMNDC1-205ENST00000477763 SPRR4Q96PI1 79 aa1.23□□□□□ -2.21
SMNDC1-205ENST00000477763 PRR15LQ9BU68 103 aa1.23□□□□□ -2.21
SMNDC1-205ENST00000477763 ABCA4P78363 2273 aa1.23□□□□□ -2.21
SMNDC1-205ENST00000477763 ITPR2Q14571 2701 aa1.23□□□□□ -2.21
SMNDC1-205ENST00000477763 CACNA1EQ15878 2313 aa1.22□□□□□ -2.21
SMNDC1-205ENST00000477763 TNRC6BQ9UPQ9 1833 aaKnown RBP1.22□□□□□ -2.21
SMNDC1-205ENST00000477763 FLNCQ14315 2725 aa1.22□□□□□ -2.21
SMNDC1-205ENST00000477763 MYMXA0A1B0GTQ4 84 aa1.22□□□□□ -2.21
SMNDC1-205ENST00000477763 IQCF6A8MYZ5 107 aa1.22□□□□□ -2.21
SMNDC1-205ENST00000477763 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.22□□□□□ -2.21
SMNDC1-205ENST00000477763 LRRC37A2A6NM11 1700 aa1.22□□□□□ -2.21
SMNDC1-205ENST00000477763 SPTBP11277 2137 aa1.22□□□□□ -2.21
SMNDC1-205ENST00000477763 FREM2Q5SZK8 3169 aa1.22□□□□□ -2.21
SMNDC1-205ENST00000477763 M0R3E3 92 aa1.21□□□□□ -2.22
SMNDC1-205ENST00000477763 LEPROTL1O95214 131 aa1.21□□□□□ -2.22
SMNDC1-205ENST00000477763 PLGLAQ15195 96 aa1.21□□□□□ -2.22
SMNDC1-205ENST00000477763 DEFB121Q5J5C9 76 aa1.21□□□□□ -2.22
SMNDC1-205ENST00000477763 CELSR3Q9NYQ7 3312 aa1.21□□□□□ -2.22
SMNDC1-205ENST00000477763 MED12Q93074 2177 aa1.21□□□□□ -2.22
SMNDC1-205ENST00000477763 A0A1B0GUL6 1792 aa1.21□□□□□ -2.22
SMNDC1-205ENST00000477763 PI4KAP42356 2102 aa1.21□□□□□ -2.22
SMNDC1-205ENST00000477763 NBEAL1Q6ZS30 2694 aa1.21□□□□□ -2.22
SMNDC1-205ENST00000477763 LOC400499M0QZD8 3231 aa1.21□□□□□ -2.22
SMNDC1-205ENST00000477763 AHCTF1Q8WYP5 2266 aa1.2□□□□□ -2.22
SMNDC1-205ENST00000477763 DOPEY2Q9Y3R5 2298 aa1.2□□□□□ -2.22
SMNDC1-205ENST00000477763 RELNP78509 3460 aa1.2□□□□□ -2.22
SMNDC1-205ENST00000477763 KNTC1P50748 2209 aa1.2□□□□□ -2.22
SMNDC1-205ENST00000477763 GOLGA4Q13439 2230 aaKnown RBP1.2□□□□□ -2.22
SMNDC1-205ENST00000477763 APC2O95996 2303 aa1.2□□□□□ -2.22
SMNDC1-205ENST00000477763 KNL1Q8NG31 2342 aa1.2□□□□□ -2.22
SMNDC1-205ENST00000477763 PDZD2O15018 2839 aa1.2□□□□□ -2.22
SMNDC1-205ENST00000477763 CEBPZOSA8MTT3 80 aa1.2□□□□□ -2.22
SMNDC1-205ENST00000477763 D6R8Y8 96 aa1.2□□□□□ -2.22
SMNDC1-205ENST00000477763 MUSTN1Q8IVN3 82 aa1.2□□□□□ -2.22
SMNDC1-205ENST00000477763 SMIM11BQ8TCY0 68 aa1.2□□□□□ -2.22
SMNDC1-205ENST00000477763 TMEM263Q8WUH6 116 aaKnown RBP1.2□□□□□ -2.22
SMNDC1-205ENST00000477763 PLAC4Q8WY50 150 aa1.2□□□□□ -2.22
SMNDC1-205ENST00000477763 LINC00472Q9H8W2 130 aa1.2□□□□□ -2.22
SMNDC1-205ENST00000477763 LOC285556D6RIA3 1793 aa1.2□□□□□ -2.22
SMNDC1-205ENST00000477763 ANKRD36CQ5JPF3 1778 aa1.2□□□□□ -2.22
SMNDC1-205ENST00000477763 FBN2P35556 2912 aa1.2□□□□□ -2.22
SMNDC1-205ENST00000477763 A0A0G2JMZ2 1700 aa1.2□□□□□ -2.22
SMNDC1-205ENST00000477763 DDX60Q8IY21 1712 aaKnown RBP1.2□□□□□ -2.22
SMNDC1-205ENST00000477763 NBASA2RRP1 2371 aa1.2□□□□□ -2.22
SMNDC1-205ENST00000477763 MGAQ8IWI9 3026 aa1.2□□□□□ -2.22
SMNDC1-205ENST00000477763 PDCD11Q14690 1871 aaKnown RBP1.2□□□□□ -2.22
SMNDC1-205ENST00000477763 NIPBLQ6KC79 2804 aaeCLIP1.2□□□□□ -2.22
SMNDC1-205ENST00000477763 SCN7AQ01118 1682 aa1.2□□□□□ -2.22
SMNDC1-205ENST00000477763 LRBAP50851 2863 aa1.19□□□□□ -2.22
SMNDC1-205ENST00000477763 A0A087WVE0 104 aa1.19□□□□□ -2.22
SMNDC1-205ENST00000477763 GVQW2A0A096LPI5 108 aaPredicted RBP1.19□□□□□ -2.22
SMNDC1-205ENST00000477763 SMIM13P0DJ93 91 aa1.19□□□□□ -2.22
SMNDC1-205ENST00000477763 ACACAQ13085 2346 aa1.19□□□□□ -2.22
SMNDC1-205ENST00000477763 HEPN1Q6WQI6 88 aa1.19□□□□□ -2.22
SMNDC1-205ENST00000477763 S100ZQ8WXG8 99 aa1.19□□□□□ -2.22
SMNDC1-205ENST00000477763 PLAC8Q9NZF1 115 aa1.19□□□□□ -2.22
SMNDC1-205ENST00000477763 MTORP42345 2549 aa1.19□□□□□ -2.22
SMNDC1-205ENST00000477763 C2CD3Q4AC94 2353 aa1.19□□□□□ -2.22
SMNDC1-205ENST00000477763 F5P12259 2224 aa1.19□□□□□ -2.22
SMNDC1-205ENST00000477763 SIPA1L3O60292 1781 aaPredicted RBP1.19□□□□□ -2.22
SMNDC1-205ENST00000477763 USP9YO00507 2555 aaPredicted RBP1.18□□□□□ -2.22
SMNDC1-205ENST00000477763 NF1P21359 2839 aa1.18□□□□□ -2.22
SMNDC1-205ENST00000477763 LRRK2Q5S007 2527 aa1.18□□□□□ -2.22
SMNDC1-205ENST00000477763 ASCC3Q8N3C0 2202 aaKnown RBP1.18□□□□□ -2.22
SMNDC1-205ENST00000477763 UMAD1C9J7I0 102 aa1.18□□□□□ -2.22
SMNDC1-205ENST00000477763 RPL37P61927 97 aaKnown RBP1.18□□□□□ -2.22
SMNDC1-205ENST00000477763 Q6ZRX8 168 aa1.18□□□□□ -2.22
SMNDC1-205ENST00000477763 UBE2D4Q9Y2X8 147 aa1.18□□□□□ -2.22
SMNDC1-205ENST00000477763 MAP1AP78559 2803 aaPredicted RBP1.18□□□□□ -2.22
SMNDC1-205ENST00000477763 LAMA1P25391 3075 aa1.18□□□□□ -2.22
SMNDC1-205ENST00000477763 CELSR2Q9HCU4 2923 aa1.18□□□□□ -2.22
SMNDC1-205ENST00000477763 LRRC37AA6NMS7 1700 aa1.18□□□□□ -2.22
SMNDC1-205ENST00000477763 HIVEP1P15822 2718 aa1.17□□□□□ -2.22
SMNDC1-205ENST00000477763 PIN1P1O15428 100 aa1.17□□□□□ -2.22
SMNDC1-205ENST00000477763 SPATA8Q6RVD6 105 aa1.17□□□□□ -2.22
SMNDC1-205ENST00000477763 FDCSPQ8NFU4 85 aa1.17□□□□□ -2.22
SMNDC1-205ENST00000477763 CSMD1Q96PZ7 3565 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms