RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 FN1P02751 2386 aaKnown RBP3.22□□□□□ -1.89
PTCD3-212ENST00000477520 IGHV3OR16-13A0A075B7E8 117 aa3.22□□□□□ -1.89
PTCD3-212ENST00000477520 IGHV3-49A0A0A0MS15 119 aa3.22□□□□□ -1.89
PTCD3-212ENST00000477520 IGHV3-74A0A0B4J1X5 117 aa3.22□□□□□ -1.89
PTCD3-212ENST00000477520 SYCNQ0VAF6 134 aa3.22□□□□□ -1.89
PTCD3-212ENST00000477520 C7orf65Q6ZTY9 151 aa3.22□□□□□ -1.89
PTCD3-212ENST00000477520 LINC00269Q8N2A0 174 aa3.22□□□□□ -1.89
PTCD3-212ENST00000477520 C5orf56Q8N8D9 126 aa3.22□□□□□ -1.89
PTCD3-212ENST00000477520 SPANXA2-OT1Q8N9U9 137 aa3.22□□□□□ -1.89
PTCD3-212ENST00000477520 DIRC1Q969H9 104 aa3.22□□□□□ -1.89
PTCD3-212ENST00000477520 SETD2Q9BYW2 2564 aaPredicted RBP3.22□□□□□ -1.89
PTCD3-212ENST00000477520 NIPBLQ6KC79 2804 aaeCLIP3.22□□□□□ -1.89
PTCD3-212ENST00000477520 MXRA5Q9NR99 2828 aa3.22□□□□□ -1.89
PTCD3-212ENST00000477520 CSMD2Q7Z408 3487 aa3.22□□□□□ -1.89
PTCD3-212ENST00000477520 MUC4Q99102 2169 aa3.21□□□□□ -1.9
PTCD3-212ENST00000477520 C2CD3Q4AC94 2353 aa3.21□□□□□ -1.9
PTCD3-212ENST00000477520 IGHV3OR16-9A0A0B4J2B5 98 aa3.21□□□□□ -1.9
PTCD3-212ENST00000477520 PSCAO43653 123 aa3.21□□□□□ -1.9
PTCD3-212ENST00000477520 ZNF73O43830 326 aaPredicted RBP3.21□□□□□ -1.9
PTCD3-212ENST00000477520 IGHV4-59P01825 116 aa3.21□□□□□ -1.9
PTCD3-212ENST00000477520 APOC4P55056 127 aa3.21□□□□□ -1.9
PTCD3-212ENST00000477520 RNASE13Q5GAN3 156 aaKnown RBP3.21□□□□□ -1.9
PTCD3-212ENST00000477520 C1orf64Q8NEQ6 169 aa3.21□□□□□ -1.9
PTCD3-212ENST00000477520 ZCCHC13Q8WW36 166 aaKnown RBP3.21□□□□□ -1.9
PTCD3-212ENST00000477520 SMR3AQ99954 134 aa3.21□□□□□ -1.9
PTCD3-212ENST00000477520 Q9BRP9 147 aa3.21□□□□□ -1.9
PTCD3-212ENST00000477520 IGHV4-28A0A0C4DH34 117 aa3.2□□□□□ -1.9
PTCD3-212ENST00000477520 LOC101927531A0A1B0GV80 90 aa3.2□□□□□ -1.9
PTCD3-212ENST00000477520 PRB3Q04118 309 aaPredicted RBP3.2□□□□□ -1.9
PTCD3-212ENST00000477520 BRD3OSQ6XYD6 125 aa3.2□□□□□ -1.9
PTCD3-212ENST00000477520 Q6ZTI0 123 aa3.2□□□□□ -1.9
PTCD3-212ENST00000477520 Q75L30 129 aa3.2□□□□□ -1.9
PTCD3-212ENST00000477520 UBE2E2Q96LR5 201 aa3.2□□□□□ -1.9
PTCD3-212ENST00000477520 PLXNB1O43157 2135 aa3.2□□□□□ -1.9
PTCD3-212ENST00000477520 ATRQ13535 2644 aa3.2□□□□□ -1.9
PTCD3-212ENST00000477520 ETDCA0A1B0GVM5 59 aa3.19□□□□□ -1.9
PTCD3-212ENST00000477520 INAFM1C9JVW0 142 aa3.19□□□□□ -1.9
PTCD3-212ENST00000477520 G3V318 75 aa3.19□□□□□ -1.9
PTCD3-212ENST00000477520 IGKV4-1P06312 121 aa3.19□□□□□ -1.9
PTCD3-212ENST00000477520 SPINK13Q1W4C9 94 aa3.19□□□□□ -1.9
PTCD3-212ENST00000477520 DEFB112Q30KQ8 113 aa3.19□□□□□ -1.9
PTCD3-212ENST00000477520 HIGD2BQ4VC39 106 aa3.19□□□□□ -1.9
PTCD3-212ENST00000477520 DEFB104AQ8WTQ1 72 aa3.19□□□□□ -1.9
PTCD3-212ENST00000477520 CDC42SE1Q9NRR8 79 aa3.19□□□□□ -1.9
PTCD3-212ENST00000477520 NF1P21359 2839 aa3.19□□□□□ -1.9
PTCD3-212ENST00000477520 TRGV2A0A075B6R0 118 aa3.18□□□□□ -1.9
PTCD3-212ENST00000477520 NBPF19A0A087WUL8 3843 aa3.18□□□□□ -1.9
PTCD3-212ENST00000477520 H3BUX3 64 aa3.18□□□□□ -1.9
PTCD3-212ENST00000477520 IGHV3-11P01762 117 aa3.18□□□□□ -1.9
PTCD3-212ENST00000477520 C6orf99Q4VX62 202 aa3.18□□□□□ -1.9
PTCD3-212ENST00000477520 Q5VV11 94 aa3.18□□□□□ -1.9
PTCD3-212ENST00000477520 TOMM7Q9P0U1 55 aa3.18□□□□□ -1.9
PTCD3-212ENST00000477520 CELA1Q9UNI1 258 aa3.18□□□□□ -1.9
PTCD3-212ENST00000477520 AKAP9Q99996 3911 aa3.17□□□□□ -1.9
PTCD3-212ENST00000477520 A6NDX4 124 aa3.17□□□□□ -1.9
PTCD3-212ENST00000477520 A6NN06 94 aa3.17□□□□□ -1.9
PTCD3-212ENST00000477520 HCG22E2RYF7 251 aa3.17□□□□□ -1.9
PTCD3-212ENST00000477520 CHKB-CPT1BH3BT56 60 aa3.17□□□□□ -1.9
PTCD3-212ENST00000477520 INSP01308 110 aa3.17□□□□□ -1.9
PTCD3-212ENST00000477520 CMC4P56277 68 aaPredicted RBP3.17□□□□□ -1.9
PTCD3-212ENST00000477520 MP68P56378 58 aa3.17□□□□□ -1.9
PTCD3-212ENST00000477520 LY6EQ16553 131 aa3.17□□□□□ -1.9
PTCD3-212ENST00000477520 NKAPP1Q8N9T2 125 aa3.17□□□□□ -1.9
PTCD3-212ENST00000477520 B9D2Q9BPU9 175 aa3.17□□□□□ -1.9
PTCD3-212ENST00000477520 HIGD2AQ9BW72 106 aa3.17□□□□□ -1.9
PTCD3-212ENST00000477520 IGHV3-73A0A0B4J1V6 119 aa3.16□□□□□ -1.9
PTCD3-212ENST00000477520 A0A1B0GUV1 79 aa3.16□□□□□ -1.9
PTCD3-212ENST00000477520 C16orf90A8MZG2 172 aa3.16□□□□□ -1.9
PTCD3-212ENST00000477520 PSPHP1O15172 72 aa3.16□□□□□ -1.9
PTCD3-212ENST00000477520 IGLV6-57P01721 117 aa3.16□□□□□ -1.9
PTCD3-212ENST00000477520 CSMD1Q96PZ7 3565 aa3.16□□□□□ -1.9
PTCD3-212ENST00000477520 COL6A5A8TX70 2615 aa3.15□□□□□ -1.9
PTCD3-212ENST00000477520 LINC00959A0A1B0GUT2 108 aa3.15□□□□□ -1.91
PTCD3-212ENST00000477520 A8MUN3 132 aa3.15□□□□□ -1.91
PTCD3-212ENST00000477520 C8orf87E5RJ46 101 aa3.15□□□□□ -1.91
PTCD3-212ENST00000477520 DEFB1P60022 68 aa3.15□□□□□ -1.91
PTCD3-212ENST00000477520 KIAA0087Q14695 138 aa3.15□□□□□ -1.91
PTCD3-212ENST00000477520 Q6ZQY7 126 aa3.15□□□□□ -1.91
PTCD3-212ENST00000477520 LINC00208Q96KT6 92 aa3.15□□□□□ -1.91
PTCD3-212ENST00000477520 KCNQ1DNQ9H478 68 aa3.15□□□□□ -1.91
PTCD3-212ENST00000477520 WNK1Q9H4A3 2382 aa3.14□□□□□ -1.91
PTCD3-212ENST00000477520 IGKV3-7A0A075B6H7 116 aa3.14□□□□□ -1.91
PTCD3-212ENST00000477520 IGHV4-30-4P0DP06 118 aa3.14□□□□□ -1.91
PTCD3-212ENST00000477520 C9orf116Q5BN46 136 aaPredicted RBP3.14□□□□□ -1.91
PTCD3-212ENST00000477520 OBSCNQ5VST9 7968 aa3.14□□□□□ -1.91
PTCD3-212ENST00000477520 GVQW2A0A096LPI5 108 aaPredicted RBP3.13□□□□□ -1.91
PTCD3-212ENST00000477520 A0A0J9YWU9 116 aa3.13□□□□□ -1.91
PTCD3-212ENST00000477520 A6NED7 52 aa3.13□□□□□ -1.91
PTCD3-212ENST00000477520 IGKV3-20P01619 116 aa3.13□□□□□ -1.91
PTCD3-212ENST00000477520 PRM2P04554 102 aa3.13□□□□□ -1.91
PTCD3-212ENST00000477520 KRTAP10-12P60413 245 aa3.13□□□□□ -1.91
PTCD3-212ENST00000477520 VPS13CQ709C8 3753 aa3.13□□□□□ -1.91
PTCD3-212ENST00000477520 ZNF469Q96JG9 3925 aaPredicted RBP3.12□□□□□ -1.91
PTCD3-212ENST00000477520 IGLV4-60A0A075B6I1 120 aa3.12□□□□□ -1.91
PTCD3-212ENST00000477520 IGLV5-48A0A075B6I7 105 aa3.12□□□□□ -1.91
PTCD3-212ENST00000477520 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.12□□□□□ -1.91
PTCD3-212ENST00000477520 SPTSSBQ8NFR3 76 aa3.12□□□□□ -1.91
PTCD3-212ENST00000477520 LINC01006Q8NI28 216 aa3.12□□□□□ -1.91
PTCD3-212ENST00000477520 C11orf45Q8TAV5 145 aa3.12□□□□□ -1.91
PTCD3-212ENST00000477520 C16orf74Q96GX8 76 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms