RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 HIST1H4GQ99525 98 aa7.45□□□□□ -1.22
CLCNKA-205ENST00000477360 TMEM126AQ9H061 195 aa7.45□□□□□ -1.22
CLCNKA-205ENST00000477360 IGKV2-28A0A075B6P5 120 aa7.44□□□□□ -1.22
CLCNKA-205ENST00000477360 PRYO14603 147 aa7.44□□□□□ -1.22
CLCNKA-205ENST00000477360 IGKV2D-28P01615 120 aa7.44□□□□□ -1.22
CLCNKA-205ENST00000477360 IGLV6-57P01721 117 aa7.43□□□□□ -1.22
CLCNKA-205ENST00000477360 UBE2AP49459 152 aa7.43□□□□□ -1.22
CLCNKA-205ENST00000477360 KCNQ1DNQ9H478 68 aa7.43□□□□□ -1.22
CLCNKA-205ENST00000477360 NCR3O14931 201 aa7.42□□□□□ -1.22
CLCNKA-205ENST00000477360 SPRR1AP35321 89 aa7.42□□□□□ -1.22
CLCNKA-205ENST00000477360 HSD52Q0P140 79 aa7.42□□□□□ -1.22
CLCNKA-205ENST00000477360 LINC00337Q8N6G1 96 aa7.42□□□□□ -1.22
CLCNKA-205ENST00000477360 CBY1Q9Y3M2 126 aa7.42□□□□□ -1.22
CLCNKA-205ENST00000477360 TRBV10-3A0A0K0K1G6 114 aa7.41□□□□□ -1.22
CLCNKA-205ENST00000477360 A4D1N5 150 aa7.41□□□□□ -1.22
CLCNKA-205ENST00000477360 TSTD3H0UI37 97 aa7.41□□□□□ -1.22
CLCNKA-205ENST00000477360 DDTP30046 118 aa7.41□□□□□ -1.22
CLCNKA-205ENST00000477360 FAM229BQ4G0N7 80 aa7.41□□□□□ -1.22
CLCNKA-205ENST00000477360 CEND1Q8N111 149 aa7.41□□□□□ -1.22
CLCNKA-205ENST00000477360 PRO1933Q9H354 126 aa7.41□□□□□ -1.22
CLCNKA-205ENST00000477360 TRAV13-2A0A0B4J235 113 aa7.4□□□□□ -1.22
CLCNKA-205ENST00000477360 TMEM238LA0A1B0GVL6 79 aa7.39□□□□□ -1.23
CLCNKA-205ENST00000477360 A6NJY4 79 aa7.39□□□□□ -1.23
CLCNKA-205ENST00000477360 S100A7L2Q5SY68 101 aa7.39□□□□□ -1.23
CLCNKA-205ENST00000477360 FAM19A1Q7Z5A9 133 aa7.39□□□□□ -1.23
CLCNKA-205ENST00000477360 KRTAP4-16G5E9R7 235 aaPredicted RBP7.38□□□□□ -1.23
CLCNKA-205ENST00000477360 CTAG1AP78358 180 aa7.38□□□□□ -1.23
CLCNKA-205ENST00000477360 PRR26Q8N8Z3 221 aa7.38□□□□□ -1.23
CLCNKA-205ENST00000477360 A0A0B4J2C4 111 aa7.37□□□□□ -1.23
CLCNKA-205ENST00000477360 CRYGAP11844 174 aa7.37□□□□□ -1.23
CLCNKA-205ENST00000477360 HMCN2Q8NDA2 5059 aa7.36□□□□□ -1.23
CLCNKA-205ENST00000477360 TRAV23DV6A0A075B6W5 121 aa7.36□□□□□ -1.23
CLCNKA-205ENST00000477360 CFC1BP0CG36 223 aa7.36□□□□□ -1.23
CLCNKA-205ENST00000477360 CFC1P0CG37 223 aa7.36□□□□□ -1.23
CLCNKA-205ENST00000477360 FXYD2P54710 66 aa7.36□□□□□ -1.23
CLCNKA-205ENST00000477360 OR13C6PQ8NH95 151 aa7.35□□□□□ -1.23
CLCNKA-205ENST00000477360 ZNF706Q9Y5V0 76 aaPredicted RBP7.35□□□□□ -1.23
CLCNKA-205ENST00000477360 ETDCA0A1B0GVM5 59 aa7.34□□□□□ -1.23
CLCNKA-205ENST00000477360 A0A1B0GWB2 263 aa7.34□□□□□ -1.23
CLCNKA-205ENST00000477360 A6NDN8 102 aa7.34□□□□□ -1.23
CLCNKA-205ENST00000477360 PRLHP81277 87 aa7.34□□□□□ -1.23
CLCNKA-205ENST00000477360 TRBV7-6A0A0J9YX20 115 aa7.33□□□□□ -1.24
CLCNKA-205ENST00000477360 ZNF73O43830 326 aaPredicted RBP7.33□□□□□ -1.24
CLCNKA-205ENST00000477360 PCP4L1A6NKN8 68 aa7.32□□□□□ -1.24
CLCNKA-205ENST00000477360 M0R143 59 aa7.32□□□□□ -1.24
CLCNKA-205ENST00000477360 BVES-AS1Q5T3Y7 98 aa7.32□□□□□ -1.24
CLCNKA-205ENST00000477360 B5MCH6 92 aa7.31□□□□□ -1.24
CLCNKA-205ENST00000477360 RAB37Q96AX2 223 aa7.31□□□□□ -1.24
CLCNKA-205ENST00000477360 HIGD2AQ9BW72 106 aa7.31□□□□□ -1.24
CLCNKA-205ENST00000477360 PRO1854Q9UHT4 67 aa7.31□□□□□ -1.24
CLCNKA-205ENST00000477360 A0A087X002 238 aa7.3□□□□□ -1.24
CLCNKA-205ENST00000477360 HINT1P49773 126 aaPredicted RBP7.3□□□□□ -1.24
CLCNKA-205ENST00000477360 Q6ZRX8 168 aa7.3□□□□□ -1.24
CLCNKA-205ENST00000477360 SMIM11BQ8TCY0 68 aa7.3□□□□□ -1.24
CLCNKA-205ENST00000477360 SPRR4Q96PI1 79 aa7.3□□□□□ -1.24
CLCNKA-205ENST00000477360 NHP2Q9NX24 153 aaKnown RBP7.3□□□□□ -1.24
CLCNKA-205ENST00000477360 ELOF1P60002 83 aaKnown RBP7.29□□□□□ -1.24
CLCNKA-205ENST00000477360 C6orf99Q4VX62 202 aa7.29□□□□□ -1.24
CLCNKA-205ENST00000477360 TYMSOSQ8TAI1 123 aa7.29□□□□□ -1.24
CLCNKA-205ENST00000477360 LINC00483Q53H64 154 aa7.28□□□□□ -1.24
CLCNKA-205ENST00000477360 SMCR5Q8TEV8 140 aa7.28□□□□□ -1.24
CLCNKA-205ENST00000477360 COX7BP24311 80 aa7.27□□□□□ -1.25
CLCNKA-205ENST00000477360 KRTAP13-2Q52LG2 175 aa7.27□□□□□ -1.25
CLCNKA-205ENST00000477360 VAMP3Q15836 100 aa7.25□□□□□ -1.25
CLCNKA-205ENST00000477360 SPAG11AQ6PDA7 123 aa7.25□□□□□ -1.25
CLCNKA-205ENST00000477360 Q9BRP9 147 aa7.25□□□□□ -1.25
CLCNKA-205ENST00000477360 DHRS4-AS1Q9P1J3 65 aa7.25□□□□□ -1.25
CLCNKA-205ENST00000477360 K7ERJ3 54 aa7.23□□□□□ -1.25
CLCNKA-205ENST00000477360 ANAPC11Q9NYG5 84 aa7.23□□□□□ -1.25
CLCNKA-205ENST00000477360 H0YGX0 51 aa7.22□□□□□ -1.25
CLCNKA-205ENST00000477360 TSPAN13O95857 204 aa7.22□□□□□ -1.25
CLCNKA-205ENST00000477360 LINC00304Q8N9R0 145 aa7.22□□□□□ -1.25
CLCNKA-205ENST00000477360 H7C2G1 150 aa7.21□□□□□ -1.26
CLCNKA-205ENST00000477360 Q1RN00 199 aa7.21□□□□□ -1.26
CLCNKA-205ENST00000477360 TRIAP1O43715 76 aa7.2□□□□□ -1.26
CLCNKA-205ENST00000477360 ERC2-IT1O76042 136 aa7.2□□□□□ -1.26
CLCNKA-205ENST00000477360 LINC00575Q6W349 94 aa7.2□□□□□ -1.26
CLCNKA-205ENST00000477360 SSBP3-AS1Q7Z2R9 100 aa7.2□□□□□ -1.26
CLCNKA-205ENST00000477360 A0A1B0GX51 115 aa7.19□□□□□ -1.26
CLCNKA-205ENST00000477360 SPRR1BP22528 89 aa7.19□□□□□ -1.26
CLCNKA-205ENST00000477360 SLC25A20O43772 301 aa7.18□□□□□ -1.26
CLCNKA-205ENST00000477360 COX6CP09669 75 aa7.18□□□□□ -1.26
CLCNKA-205ENST00000477360 GAGE2AQ6NT46 116 aa7.18□□□□□ -1.26
CLCNKA-205ENST00000477360 SNHG12Q9BXW3 62 aa7.18□□□□□ -1.26
CLCNKA-205ENST00000477360 RPS29P62273 56 aaKnown RBP7.17□□□□□ -1.26
CLCNKA-205ENST00000477360 C3orf22Q8N5N4 141 aa7.17□□□□□ -1.26
CLCNKA-205ENST00000477360 hADV29S1A0JD25 119 aa7.16□□□□□ -1.26
CLCNKA-205ENST00000477360 SPINK1P00995 79 aa7.16□□□□□ -1.26
CLCNKA-205ENST00000477360 PSMB2P49721 201 aa7.16□□□□□ -1.26
CLCNKA-205ENST00000477360 BATFQ16520 125 aa7.16□□□□□ -1.26
CLCNKA-205ENST00000477360 C4orf48Q5BLP8 95 aa7.16□□□□□ -1.26
CLCNKA-205ENST00000477360 UBR4Q5T4S7 5183 aa7.16□□□□□ -1.26
CLCNKA-205ENST00000477360 IGLV5-48A0A075B6I7 105 aa7.15□□□□□ -1.26
CLCNKA-205ENST00000477360 SNCGO76070 127 aa7.14□□□□□ -1.27
CLCNKA-205ENST00000477360 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.14□□□□□ -1.27
CLCNKA-205ENST00000477360 FAM218AQ96MZ4 157 aa7.14□□□□□ -1.27
CLCNKA-205ENST00000477360 LRP2P98164 4655 aa7.14□□□□□ -1.27
CLCNKA-205ENST00000477360 TAX1BP3O14907 124 aa7.13□□□□□ -1.27
CLCNKA-205ENST00000477360 LINC01547P58512 204 aaPredicted RBP7.13□□□□□ -1.27
CLCNKA-205ENST00000477360 OCIAD2Q56VL3 154 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms