RNA–Protein interactions for RNA: ENST00000477169.5

SMARCD3-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-210ENST00000477169 KRTAP13-1Q8IUC0 172 aa10.38□□□□□ -0.75
SMARCD3-210ENST00000477169 SPRR1AP35321 89 aa10.37□□□□□ -0.75
SMARCD3-210ENST00000477169 RPL28P46779 137 aaKnown RBP10.37□□□□□ -0.75
SMARCD3-210ENST00000477169 LINC00518Q8N0U6 118 aa10.37□□□□□ -0.75
SMARCD3-210ENST00000477169 HIGD1BQ9P298 99 aa10.37□□□□□ -0.75
SMARCD3-210ENST00000477169 UBE2AP49459 152 aa10.36□□□□□ -0.75
SMARCD3-210ENST00000477169 C2orf91Q6ZV80 131 aa10.36□□□□□ -0.75
SMARCD3-210ENST00000477169 FAM19A1Q7Z5A9 133 aa10.36□□□□□ -0.75
SMARCD3-210ENST00000477169 LINC00337Q8N6G1 96 aa10.36□□□□□ -0.75
SMARCD3-210ENST00000477169 S100A12P80511 92 aa10.35□□□□□ -0.75
SMARCD3-210ENST00000477169 OR13C6PQ8NH95 151 aa10.35□□□□□ -0.75
SMARCD3-210ENST00000477169 HIST1H4GQ99525 98 aa10.35□□□□□ -0.75
SMARCD3-210ENST00000477169 RNF213Q63HN8 5207 aa10.34□□□□□ -0.75
SMARCD3-210ENST00000477169 LOC105371267A0A1B0GV96 52 aa10.34□□□□□ -0.75
SMARCD3-210ENST00000477169 KRTAP4-16G5E9R7 235 aaPredicted RBP10.34□□□□□ -0.75
SMARCD3-210ENST00000477169 PRLHP81277 87 aa10.34□□□□□ -0.75
SMARCD3-210ENST00000477169 PRR26Q8N8Z3 221 aa10.33□□□□□ -0.76
SMARCD3-210ENST00000477169 TRAV23DV6A0A075B6W5 121 aa10.32□□□□□ -0.76
SMARCD3-210ENST00000477169 A4D1N5 150 aa10.32□□□□□ -0.76
SMARCD3-210ENST00000477169 ETDCA0A1B0GVM5 59 aa10.31□□□□□ -0.76
SMARCD3-210ENST00000477169 KRTAP1-4P0C5Y4 121 aa10.3□□□□□ -0.76
SMARCD3-210ENST00000477169 SMIM6P0DI80 62 aa10.3□□□□□ -0.76
SMARCD3-210ENST00000477169 CBY1Q9Y3M2 126 aa10.3□□□□□ -0.76
SMARCD3-210ENST00000477169 B5MCH6 92 aa10.29□□□□□ -0.76
SMARCD3-210ENST00000477169 ZNF73O43830 326 aaPredicted RBP10.29□□□□□ -0.76
SMARCD3-210ENST00000477169 TRAV13-2A0A0B4J235 113 aa10.28□□□□□ -0.76
SMARCD3-210ENST00000477169 A6NDN8 102 aa10.28□□□□□ -0.76
SMARCD3-210ENST00000477169 TAL2Q16559 108 aa10.27□□□□□ -0.77
SMARCD3-210ENST00000477169 UQCR10Q9UDW1 63 aa10.27□□□□□ -0.77
SMARCD3-210ENST00000477169 HIGD2AQ9BW72 106 aa10.26□□□□□ -0.77
SMARCD3-210ENST00000477169 RPL13AP40429 203 aaKnown RBP10.25□□□□□ -0.77
SMARCD3-210ENST00000477169 Q6ZRX8 168 aa10.25□□□□□ -0.77
SMARCD3-210ENST00000477169 CEND1Q8N111 149 aa10.25□□□□□ -0.77
SMARCD3-210ENST00000477169 C12orf57Q99622 126 aa10.25□□□□□ -0.77
SMARCD3-210ENST00000477169 SMCR5Q8TEV8 140 aa10.24□□□□□ -0.77
SMARCD3-210ENST00000477169 PRO1933Q9H354 126 aa10.24□□□□□ -0.77
SMARCD3-210ENST00000477169 C6orf99Q4VX62 202 aa10.23□□□□□ -0.77
SMARCD3-210ENST00000477169 Q9BRP9 147 aa10.23□□□□□ -0.77
SMARCD3-210ENST00000477169 CFC1BP0CG36 223 aa10.22□□□□□ -0.77
SMARCD3-210ENST00000477169 CFC1P0CG37 223 aa10.22□□□□□ -0.77
SMARCD3-210ENST00000477169 HINT1P49773 126 aaPredicted RBP10.22□□□□□ -0.77
SMARCD3-210ENST00000477169 SMIM11BQ8TCY0 68 aa10.22□□□□□ -0.77
SMARCD3-210ENST00000477169 HSD52Q0P140 79 aa10.21□□□□□ -0.77
SMARCD3-210ENST00000477169 ERC2-IT1O76042 136 aa10.2□□□□□ -0.78
SMARCD3-210ENST00000477169 FXYD2P54710 66 aa10.2□□□□□ -0.78
SMARCD3-210ENST00000477169 LPAP08519 4548 aa10.2□□□□□ -0.78
SMARCD3-210ENST00000477169 COX7BP24311 80 aa10.19□□□□□ -0.78
SMARCD3-210ENST00000477169 ELOF1P60002 83 aaKnown RBP10.19□□□□□ -0.78
SMARCD3-210ENST00000477169 ANAPC11Q9NYG5 84 aa10.19□□□□□ -0.78
SMARCD3-210ENST00000477169 TRBV7-6A0A0J9YX20 115 aa10.18□□□□□ -0.78
SMARCD3-210ENST00000477169 A0A0B4J2C4 111 aa10.17□□□□□ -0.78
SMARCD3-210ENST00000477169 TMEM238LA0A1B0GVL6 79 aa10.17□□□□□ -0.78
SMARCD3-210ENST00000477169 A6NJY4 79 aa10.17□□□□□ -0.78
SMARCD3-210ENST00000477169 SPRR4Q96PI1 79 aa10.17□□□□□ -0.78
SMARCD3-210ENST00000477169 RAB37Q96AX2 223 aa10.16□□□□□ -0.78
SMARCD3-210ENST00000477169 A0A1B0GWB2 263 aa10.15□□□□□ -0.78
SMARCD3-210ENST00000477169 ZNF706Q9Y5V0 76 aaPredicted RBP10.15□□□□□ -0.78
SMARCD3-210ENST00000477169 A0A087X002 238 aa10.14□□□□□ -0.79
SMARCD3-210ENST00000477169 FAM229BQ4G0N7 80 aa10.14□□□□□ -0.79
SMARCD3-210ENST00000477169 DHRS4-AS1Q9P1J3 65 aa10.14□□□□□ -0.79
SMARCD3-210ENST00000477169 CRYGAP11844 174 aa10.13□□□□□ -0.79
SMARCD3-210ENST00000477169 H7C2G1 150 aa10.12□□□□□ -0.79
SMARCD3-210ENST00000477169 KRTAP13-2Q52LG2 175 aa10.11□□□□□ -0.79
SMARCD3-210ENST00000477169 ST20-AS1Q8NBB2 130 aa10.11□□□□□ -0.79
SMARCD3-210ENST00000477169 NHP2Q9NX24 153 aaKnown RBP10.11□□□□□ -0.79
SMARCD3-210ENST00000477169 PRO1854Q9UHT4 67 aa10.11□□□□□ -0.79
SMARCD3-210ENST00000477169 VAMP3Q15836 100 aa10.1□□□□□ -0.79
SMARCD3-210ENST00000477169 LINC00483Q53H64 154 aa10.1□□□□□ -0.79
SMARCD3-210ENST00000477169 BVES-AS1Q5T3Y7 98 aa10.1□□□□□ -0.79
SMARCD3-210ENST00000477169 GAGE2AQ6NT46 116 aa10.1□□□□□ -0.79
SMARCD3-210ENST00000477169 TSTD3H0UI37 97 aa10.09□□□□□ -0.79
SMARCD3-210ENST00000477169 CTAG1AP78358 180 aa10.09□□□□□ -0.79
SMARCD3-210ENST00000477169 PRR4Q16378 134 aa10.09□□□□□ -0.79
SMARCD3-210ENST00000477169 TYMSOSQ8TAI1 123 aa10.09□□□□□ -0.79
SMARCD3-210ENST00000477169 K7ERJ3 54 aa10.07□□□□□ -0.8
SMARCD3-210ENST00000477169 TSPAN13O95857 204 aa10.06□□□□□ -0.8
SMARCD3-210ENST00000477169 LINC00575Q6W349 94 aa10.06□□□□□ -0.8
SMARCD3-210ENST00000477169 C3orf22Q8N5N4 141 aa10.06□□□□□ -0.8
SMARCD3-210ENST00000477169 Q1RN00 199 aa10.05□□□□□ -0.8
SMARCD3-210ENST00000477169 SLC25A20O43772 301 aa10.03□□□□□ -0.8
SMARCD3-210ENST00000477169 M0R143 59 aa10.02□□□□□ -0.81
SMARCD3-210ENST00000477169 SPRR1BP22528 89 aa10.02□□□□□ -0.81
SMARCD3-210ENST00000477169 hADV29S1A0JD25 119 aa10.01□□□□□ -0.81
SMARCD3-210ENST00000477169 H0YGX0 51 aa10□□□□□ -0.81
SMARCD3-210ENST00000477169 TRIAP1O43715 76 aa10□□□□□ -0.81
SMARCD3-210ENST00000477169 LINC01547P58512 204 aaPredicted RBP10□□□□□ -0.81
SMARCD3-210ENST00000477169 DEFB105AQ8NG35 78 aa10□□□□□ -0.81
SMARCD3-210ENST00000477169 IGLV5-48A0A075B6I7 105 aa9.99□□□□□ -0.81
SMARCD3-210ENST00000477169 IGLV9-49A0A0B4J1Y8 123 aa9.98□□□□□ -0.81
SMARCD3-210ENST00000477169 TEX49A0A1B0GTD5 131 aa9.98□□□□□ -0.81
SMARCD3-210ENST00000477169 Q6ZQY7 126 aa9.97□□□□□ -0.81
SMARCD3-210ENST00000477169 FAM218AQ96MZ4 157 aa9.97□□□□□ -0.81
SMARCD3-210ENST00000477169 MOBPQ13875 183 aa9.96□□□□□ -0.82
SMARCD3-210ENST00000477169 Q8N377 158 aa9.96□□□□□ -0.82
SMARCD3-210ENST00000477169 LINC00304Q8N9R0 145 aa9.96□□□□□ -0.82
SMARCD3-210ENST00000477169 PSMB2P49721 201 aa9.95□□□□□ -0.82
SMARCD3-210ENST00000477169 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.94□□□□□ -0.82
SMARCD3-210ENST00000477169 SMIM29Q86T20 159 aa9.94□□□□□ -0.82
SMARCD3-210ENST00000477169 Q8NBF4 154 aa9.94□□□□□ -0.82
SMARCD3-210ENST00000477169 LAMTOR3Q9UHA4 124 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms