RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 CFAP54Q96N23 3096 aa2.57□□□□□ -2
CD55-208ENST00000476590 SPTBN1Q01082 2364 aaKnown RBP2.57□□□□□ -2
CD55-208ENST00000476590 TRGV1A0A0A0MS02 117 aa2.57□□□□□ -2
CD55-208ENST00000476590 A0A0J9YWU9 116 aa2.57□□□□□ -2
CD55-208ENST00000476590 C5orf56Q8N8D9 126 aa2.57□□□□□ -2
CD55-208ENST00000476590 VPS13AQ96RL7 3174 aa2.57□□□□□ -2
CD55-208ENST00000476590 A8MUU9 505 aa2.56□□□□□ -2
CD55-208ENST00000476590 AHCTF1Q8WYP5 2266 aa2.56□□□□□ -2
CD55-208ENST00000476590 DEFB113Q30KQ7 82 aa2.56□□□□□ -2
CD55-208ENST00000476590 DEFB105AQ8NG35 78 aa2.56□□□□□ -2
CD55-208ENST00000476590 FAM186AA6NE01 2351 aa2.55□□□□□ -2
CD55-208ENST00000476590 IGLV8-61A0A075B6I0 122 aa2.55□□□□□ -2
CD55-208ENST00000476590 A0A1B0GUV1 79 aa2.55□□□□□ -2
CD55-208ENST00000476590 LUZP6Q538Z0 58 aa2.55□□□□□ -2
CD55-208ENST00000476590 DMAC1Q96GE9 116 aa2.55□□□□□ -2
CD55-208ENST00000476590 TP53AIP1Q9HCN2 124 aa2.55□□□□□ -2
CD55-208ENST00000476590 DNAH14Q0VDD8 3507 aa2.55□□□□□ -2
CD55-208ENST00000476590 GVQW2A0A096LPI5 108 aaPredicted RBP2.54□□□□□ -2
CD55-208ENST00000476590 NDUFAF8A1L188 74 aa2.54□□□□□ -2
CD55-208ENST00000476590 K7ERS5 55 aa2.54□□□□□ -2
CD55-208ENST00000476590 CASC10Q5T4H9 136 aa2.54□□□□□ -2
CD55-208ENST00000476590 KRTAP1-5Q9BYS1 174 aa2.54□□□□□ -2
CD55-208ENST00000476590 TNRC18O15417 2968 aaPredicted RBP2.54□□□□□ -2
CD55-208ENST00000476590 HELZ2Q9BYK8 2649 aaKnown RBP2.54□□□□□ -2
CD55-208ENST00000476590 IGLV10-54A0A075B6I4 117 aa2.54□□□□□ -2
CD55-208ENST00000476590 IGKV2-24A0A0C4DH68 120 aa2.54□□□□□ -2
CD55-208ENST00000476590 UNQ6190/PRO20217Q6UXQ8 127 aa2.54□□□□□ -2
CD55-208ENST00000476590 ZZEF1O43149 2961 aa2.53□□□□□ -2
CD55-208ENST00000476590 A6NDX4 124 aa2.53□□□□□ -2
CD55-208ENST00000476590 NUPR2A6NF83 97 aa2.53□□□□□ -2
CD55-208ENST00000476590 CYSRT1A8MQ03 144 aa2.53□□□□□ -2
CD55-208ENST00000476590 LYNX1G3V0Z9 82 aa2.53□□□□□ -2
CD55-208ENST00000476590 LYNX1P0DP58 116 aa2.53□□□□□ -2
CD55-208ENST00000476590 ACYP2P14621 99 aa2.53□□□□□ -2
CD55-208ENST00000476590 DEFB131AP59861 70 aa2.53□□□□□ -2
CD55-208ENST00000476590 LINC00472Q9H8W2 130 aa2.53□□□□□ -2
CD55-208ENST00000476590 PCLOQ9Y6V0 5065 aa2.53□□□□□ -2
CD55-208ENST00000476590 MKI67P46013 3256 aaKnown RBP2.52□□□□□ -2.01
CD55-208ENST00000476590 CFAP47Q6ZTR5 3102 aa2.52□□□□□ -2.01
CD55-208ENST00000476590 PTPN13Q12923 2485 aa2.52□□□□□ -2.01
CD55-208ENST00000476590 CEP250Q9BV73 2442 aa2.52□□□□□ -2.01
CD55-208ENST00000476590 DNAH10OSP0CZ25 163 aa2.52□□□□□ -2.01
CD55-208ENST00000476590 RPL37AP61513 92 aaKnown RBP2.52□□□□□ -2.01
CD55-208ENST00000476590 KRTAP26-1Q6PEX3 210 aa2.51□□□□□ -2.01
CD55-208ENST00000476590 CLPSL2Q6UWE3 100 aa2.51□□□□□ -2.01
CD55-208ENST00000476590 KIAA1109Q2LD37 5005 aa2.51□□□□□ -2.01
CD55-208ENST00000476590 FRYLO94915 3013 aa2.51□□□□□ -2.01
CD55-208ENST00000476590 C6orf48Q9UBA6 75 aa2.51□□□□□ -2.01
CD55-208ENST00000476590 UBR4Q5T4S7 5183 aa2.51□□□□□ -2.01
CD55-208ENST00000476590 SPTBN2O15020 2390 aa2.51□□□□□ -2.01
CD55-208ENST00000476590 NAV2Q8IVL1 2488 aa2.5□□□□□ -2.01
CD55-208ENST00000476590 MMP24-AS1A0A0U1RRL7 71 aa2.5□□□□□ -2.01
CD55-208ENST00000476590 CAMK2N2Q96S95 79 aa2.5□□□□□ -2.01
CD55-208ENST00000476590 KRTAP3-1Q9BYR8 98 aa2.5□□□□□ -2.01
CD55-208ENST00000476590 WNK1Q9H4A3 2382 aa2.5□□□□□ -2.01
CD55-208ENST00000476590 PKDREJQ9NTG1 2253 aa2.5□□□□□ -2.01
CD55-208ENST00000476590 FRYQ5TBA9 3013 aa2.5□□□□□ -2.01
CD55-208ENST00000476590 IGLV7-43P04211 117 aa2.5□□□□□ -2.01
CD55-208ENST00000476590 TLX1NBP0CAT3 122 aa2.5□□□□□ -2.01
CD55-208ENST00000476590 Q5W150 140 aa2.5□□□□□ -2.01
CD55-208ENST00000476590 SPINT4Q6UDR6 99 aa2.5□□□□□ -2.01
CD55-208ENST00000476590 CIRBP-AS1Q8TBR5 109 aa2.5□□□□□ -2.01
CD55-208ENST00000476590 EPG5Q9HCE0 2579 aa2.49□□□□□ -2.01
CD55-208ENST00000476590 FAM168BA1KXE4 195 aa2.49□□□□□ -2.01
CD55-208ENST00000476590 LINC01565O15544 149 aa2.49□□□□□ -2.01
CD55-208ENST00000476590 ANGP03950 147 aaKnown RBP2.49□□□□□ -2.01
CD55-208ENST00000476590 DEFB109BQ30KR1 87 aa2.49□□□□□ -2.01
CD55-208ENST00000476590 Q6ZRX8 168 aa2.49□□□□□ -2.01
CD55-208ENST00000476590 NOP10Q9NPE3 64 aaKnown RBP2.49□□□□□ -2.01
CD55-208ENST00000476590 CHD7Q9P2D1 2997 aa2.49□□□□□ -2.01
CD55-208ENST00000476590 IGFL1Q6UW32 110 aa2.49□□□□□ -2.01
CD55-208ENST00000476590 LINC00304Q8N9R0 145 aa2.49□□□□□ -2.01
CD55-208ENST00000476590 SPTBN5Q9NRC6 3674 aaKnown RBP2.49□□□□□ -2.01
CD55-208ENST00000476590 A0A1B0GVX0 72 aa2.48□□□□□ -2.01
CD55-208ENST00000476590 BRD3OSQ6XYD6 125 aa2.48□□□□□ -2.01
CD55-208ENST00000476590 C16orf74Q96GX8 76 aa2.48□□□□□ -2.01
CD55-208ENST00000476590 CCL19Q99731 98 aa2.48□□□□□ -2.01
CD55-208ENST00000476590 CACNA1BQ00975 2339 aa2.48□□□□□ -2.01
CD55-208ENST00000476590 WDFY4Q6ZS81 3184 aa2.47□□□□□ -2.01
CD55-208ENST00000476590 A0A087WTM6 91 aa2.47□□□□□ -2.01
CD55-208ENST00000476590 KRTAP15-1Q3LI76 137 aa2.47□□□□□ -2.01
CD55-208ENST00000476590 PRUNE2Q8WUY3 3088 aa2.47□□□□□ -2.01
CD55-208ENST00000476590 PIEZO1Q92508 2521 aa2.47□□□□□ -2.01
CD55-208ENST00000476590 GPR179Q6PRD1 2367 aa2.46□□□□□ -2.01
CD55-208ENST00000476590 ALMS1Q8TCU4 4167 aa2.46□□□□□ -2.02
CD55-208ENST00000476590 KALRNO60229 2985 aa2.46□□□□□ -2.02
CD55-208ENST00000476590 A0A1W2PNU3 283 aaPredicted RBP2.46□□□□□ -2.02
CD55-208ENST00000476590 DEFB123Q8N688 67 aa2.46□□□□□ -2.02
CD55-208ENST00000476590 APC2O95996 2303 aa2.46□□□□□ -2.02
CD55-208ENST00000476590 PCNX1Q96RV3 2341 aa2.45□□□□□ -2.02
CD55-208ENST00000476590 LAMA2P24043 3122 aaKnown RBP2.45□□□□□ -2.02
CD55-208ENST00000476590 SPRR1AP35321 89 aa2.45□□□□□ -2.02
CD55-208ENST00000476590 MYO18BQ8IUG5 2567 aa2.45□□□□□ -2.02
CD55-208ENST00000476590 CACNA1EQ15878 2313 aa2.45□□□□□ -2.02
CD55-208ENST00000476590 CHD6Q8TD26 2715 aa2.45□□□□□ -2.02
CD55-208ENST00000476590 VCANP13611 3396 aa2.45□□□□□ -2.02
CD55-208ENST00000476590 TRIOO75962 3097 aa2.45□□□□□ -2.02
CD55-208ENST00000476590 DEFB136Q30KP8 78 aa2.44□□□□□ -2.02
CD55-208ENST00000476590 TMEM105Q8N8V8 129 aa2.44□□□□□ -2.02
CD55-208ENST00000476590 C15orf56Q8N910 161 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms