RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 IGLV5-37A0A075B6J1 123 aa4.01□□□□□ -1.77
CLDN4-205ENST00000476494 C9orf118A6NHY6 69 aa4.01□□□□□ -1.77
CLDN4-205ENST00000476494 M0R378 163 aa4.01□□□□□ -1.77
CLDN4-205ENST00000476494 TAX1BP3O14907 124 aa4.01□□□□□ -1.77
CLDN4-205ENST00000476494 GAGE2BQ13066 116 aa4.01□□□□□ -1.77
CLDN4-205ENST00000476494 LYRM7Q5U5X0 104 aa4.01□□□□□ -1.77
CLDN4-205ENST00000476494 SDIM1Q6ZPB5 146 aa4.01□□□□□ -1.77
CLDN4-205ENST00000476494 XAGE1AQ9HD64 81 aa4.01□□□□□ -1.77
CLDN4-205ENST00000476494 IGKV2-28A0A075B6P5 120 aa4□□□□□ -1.77
CLDN4-205ENST00000476494 K7ERJ3 54 aa4□□□□□ -1.77
CLDN4-205ENST00000476494 IGKV2D-28P01615 120 aa4□□□□□ -1.77
CLDN4-205ENST00000476494 COX6CP09669 75 aa4□□□□□ -1.77
CLDN4-205ENST00000476494 VPREB1P12018 145 aa4□□□□□ -1.77
CLDN4-205ENST00000476494 S100A7L2Q5SY68 101 aa4□□□□□ -1.77
CLDN4-205ENST00000476494 C9orf129Q5T035 196 aaKnown RBP4□□□□□ -1.77
CLDN4-205ENST00000476494 NKAPP1Q8N9T2 125 aa4□□□□□ -1.77
CLDN4-205ENST00000476494 OR13C6PQ8NH95 151 aa4□□□□□ -1.77
CLDN4-205ENST00000476494 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4□□□□□ -1.77
CLDN4-205ENST00000476494 IGLV6-57P01721 117 aa3.99□□□□□ -1.77
CLDN4-205ENST00000476494 FABP2P12104 132 aa3.99□□□□□ -1.77
CLDN4-205ENST00000476494 RPL13AP40429 203 aaKnown RBP3.99□□□□□ -1.77
CLDN4-205ENST00000476494 RPL28P46779 137 aaKnown RBP3.99□□□□□ -1.77
CLDN4-205ENST00000476494 PSMB2P49721 201 aa3.99□□□□□ -1.77
CLDN4-205ENST00000476494 Q1RN00 199 aa3.99□□□□□ -1.77
CLDN4-205ENST00000476494 LINC00337Q8N6G1 96 aa3.99□□□□□ -1.77
CLDN4-205ENST00000476494 TRBV20-1A0A075B6N2 111 aa3.98□□□□□ -1.77
CLDN4-205ENST00000476494 A0A096LNI7 61 aa3.98□□□□□ -1.77
CLDN4-205ENST00000476494 A0A1W2PPM0 123 aa3.98□□□□□ -1.77
CLDN4-205ENST00000476494 H0YGX0 51 aa3.98□□□□□ -1.77
CLDN4-205ENST00000476494 H3BUT2 72 aa3.98□□□□□ -1.77
CLDN4-205ENST00000476494 H7C2G1 150 aa3.98□□□□□ -1.77
CLDN4-205ENST00000476494 TSPAN13O95857 204 aa3.98□□□□□ -1.77
CLDN4-205ENST00000476494 SCGB1C2P0DMR2 95 aa3.98□□□□□ -1.77
CLDN4-205ENST00000476494 PRR3P79522 188 aaKnown RBP3.98□□□□□ -1.77
CLDN4-205ENST00000476494 VAMP3Q15836 100 aa3.98□□□□□ -1.77
CLDN4-205ENST00000476494 IGKV2-24A0A0C4DH68 120 aa3.97□□□□□ -1.77
CLDN4-205ENST00000476494 TRBV7-6A0A0J9YX20 115 aa3.97□□□□□ -1.77
CLDN4-205ENST00000476494 NCR3O14931 201 aa3.97□□□□□ -1.77
CLDN4-205ENST00000476494 SNCGO76070 127 aa3.97□□□□□ -1.77
CLDN4-205ENST00000476494 MRPL55Q7Z7F7 128 aaKnown RBP3.97□□□□□ -1.77
CLDN4-205ENST00000476494 DPH3Q96FX2 82 aa3.97□□□□□ -1.77
CLDN4-205ENST00000476494 C22orf24Q9Y442 160 aa3.97□□□□□ -1.77
CLDN4-205ENST00000476494 GTF2H5Q6ZYL4 71 aa3.96□□□□□ -1.78
CLDN4-205ENST00000476494 Q8NDZ9 215 aa3.96□□□□□ -1.78
CLDN4-205ENST00000476494 SMIM11BQ8TCY0 68 aa3.96□□□□□ -1.78
CLDN4-205ENST00000476494 SPACA4Q8TDM5 124 aa3.96□□□□□ -1.78
CLDN4-205ENST00000476494 C7orf33Q8WU49 177 aa3.96□□□□□ -1.78
CLDN4-205ENST00000476494 KCNQ1DNQ9H478 68 aa3.96□□□□□ -1.78
CLDN4-205ENST00000476494 IGLV1-50A0A075B6I6 118 aa3.95□□□□□ -1.78
CLDN4-205ENST00000476494 TRAV23DV6A0A075B6W5 121 aa3.95□□□□□ -1.78
CLDN4-205ENST00000476494 TRBV10-3A0A0K0K1G6 114 aa3.95□□□□□ -1.78
CLDN4-205ENST00000476494 GAGE10A6NGK3 116 aa3.95□□□□□ -1.78
CLDN4-205ENST00000476494 PRYO14603 147 aa3.95□□□□□ -1.78
CLDN4-205ENST00000476494 TRIAP1O43715 76 aa3.95□□□□□ -1.78
CLDN4-205ENST00000476494 FAM19A5Q7Z5A7 132 aaPredicted RBP3.95□□□□□ -1.78
CLDN4-205ENST00000476494 LINC00167Q96N53 147 aa3.95□□□□□ -1.78
CLDN4-205ENST00000476494 PLAC8Q9NZF1 115 aa3.95□□□□□ -1.78
CLDN4-205ENST00000476494 A0A1B0GX51 115 aa3.94□□□□□ -1.78
CLDN4-205ENST00000476494 A0A1W2PNN7 141 aa3.94□□□□□ -1.78
CLDN4-205ENST00000476494 FAM168BA1KXE4 195 aa3.94□□□□□ -1.78
CLDN4-205ENST00000476494 M0QXV9 152 aa3.94□□□□□ -1.78
CLDN4-205ENST00000476494 ZNF73O43830 326 aaPredicted RBP3.94□□□□□ -1.78
CLDN4-205ENST00000476494 CHTF8P0CG12 524 aa3.94□□□□□ -1.78
CLDN4-205ENST00000476494 ATXN8Q156A1 80 aa3.94□□□□□ -1.78
CLDN4-205ENST00000476494 KRTAP7-1Q8IUC3 87 aa3.94□□□□□ -1.78
CLDN4-205ENST00000476494 DIRC1Q969H9 104 aa3.94□□□□□ -1.78
CLDN4-205ENST00000476494 SPCS1Q9Y6A9 102 aa3.94□□□□□ -1.78
CLDN4-205ENST00000476494 A0A087WYN8 130 aa3.93□□□□□ -1.78
CLDN4-205ENST00000476494 A0A1B0GV90 55 aa3.93□□□□□ -1.78
CLDN4-205ENST00000476494 K7EP34 96 aa3.93□□□□□ -1.78
CLDN4-205ENST00000476494 SLC25A20O43772 301 aa3.93□□□□□ -1.78
CLDN4-205ENST00000476494 GHRHP01286 108 aa3.93□□□□□ -1.78
CLDN4-205ENST00000476494 C6orf99Q4VX62 202 aa3.93□□□□□ -1.78
CLDN4-205ENST00000476494 NAA38Q9BRA0 125 aaKnown RBP3.93□□□□□ -1.78
CLDN4-205ENST00000476494 H3BQ85 93 aa3.92□□□□□ -1.78
CLDN4-205ENST00000476494 LST1O00453 97 aa3.92□□□□□ -1.78
CLDN4-205ENST00000476494 TRACP01848 142 aa3.92□□□□□ -1.78
CLDN4-205ENST00000476494 COX7BP24311 80 aa3.92□□□□□ -1.78
CLDN4-205ENST00000476494 SPRR1AP35321 89 aa3.92□□□□□ -1.78
CLDN4-205ENST00000476494 UBE2BP63146 152 aa3.92□□□□□ -1.78
CLDN4-205ENST00000476494 UBE2V1Q13404 147 aa3.92□□□□□ -1.78
CLDN4-205ENST00000476494 REG3GQ6UW15 175 aa3.92□□□□□ -1.78
CLDN4-205ENST00000476494 SPINK6Q6UWN8 80 aa3.92□□□□□ -1.78
CLDN4-205ENST00000476494 ETDCA0A1B0GVM5 59 aa3.91□□□□□ -1.78
CLDN4-205ENST00000476494 RPL37AP8A6NKH3 93 aa3.91□□□□□ -1.78
CLDN4-205ENST00000476494 H0Y9J4 135 aa3.91□□□□□ -1.78
CLDN4-205ENST00000476494 TCL1BO95988 128 aa3.91□□□□□ -1.78
CLDN4-205ENST00000476494 ELOF1P60002 83 aaKnown RBP3.91□□□□□ -1.78
CLDN4-205ENST00000476494 LINC00575Q6W349 94 aa3.91□□□□□ -1.78
CLDN4-205ENST00000476494 DHRS4-AS1Q9P1J3 65 aa3.91□□□□□ -1.78
CLDN4-205ENST00000476494 FCGBPQ9Y6R7 5405 aaPredicted RBP3.91□□□□□ -1.78
CLDN4-205ENST00000476494 SSPOA2VEC9 5147 aa3.91□□□□□ -1.78
CLDN4-205ENST00000476494 hADV29S1A0JD25 119 aa3.9□□□□□ -1.79
CLDN4-205ENST00000476494 F8W1H4 67 aa3.9□□□□□ -1.79
CLDN4-205ENST00000476494 KRTAP4-16G5E9R7 235 aaPredicted RBP3.9□□□□□ -1.79
CLDN4-205ENST00000476494 DNAL4O96015 105 aa3.9□□□□□ -1.79
CLDN4-205ENST00000476494 LINC01547P58512 204 aaPredicted RBP3.9□□□□□ -1.79
CLDN4-205ENST00000476494 PRR4Q16378 134 aa3.9□□□□□ -1.79
CLDN4-205ENST00000476494 OCIAD2Q56VL3 154 aa3.9□□□□□ -1.79
CLDN4-205ENST00000476494 PHF5AQ7RTV0 110 aaKnown RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms