RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 Q6ZQY7 126 aa5.65□□□□□ -1.51
VAPB-205ENST00000476395 TMEM254Q8TBM7 123 aa5.65□□□□□ -1.51
VAPB-205ENST00000476395 LINC00269Q8N2A0 174 aa5.65□□□□□ -1.51
VAPB-205ENST00000476395 BPY2O14599 106 aa5.64□□□□□ -1.51
VAPB-205ENST00000476395 NKAPP1Q8N9T2 125 aa5.64□□□□□ -1.51
VAPB-205ENST00000476395 TRGV4A0A0C4DH28 118 aa5.64□□□□□ -1.51
VAPB-205ENST00000476395 A0A1B0GUV1 79 aa5.64□□□□□ -1.51
VAPB-205ENST00000476395 COL6A5A8TX70 2615 aa5.64□□□□□ -1.51
VAPB-205ENST00000476395 FBN1P35555 2871 aaKnown RBP5.64□□□□□ -1.51
VAPB-205ENST00000476395 LINC00575Q6W349 94 aa5.63□□□□□ -1.51
VAPB-205ENST00000476395 INAFM1C9JVW0 142 aa5.63□□□□□ -1.51
VAPB-205ENST00000476395 HIGD2AQ9BW72 106 aa5.63□□□□□ -1.51
VAPB-205ENST00000476395 LINC00588Q9Y4M8 146 aa5.63□□□□□ -1.51
VAPB-205ENST00000476395 MP68P56378 58 aa5.62□□□□□ -1.51
VAPB-205ENST00000476395 Q8IZM0 81 aa5.62□□□□□ -1.51
VAPB-205ENST00000476395 ESRGQ1W209 222 aa5.62□□□□□ -1.51
VAPB-205ENST00000476395 LCE2DQ5TA82 110 aaPredicted RBP5.62□□□□□ -1.51
VAPB-205ENST00000476395 DEFB130BP0DP73 79 aa5.61□□□□□ -1.51
VAPB-205ENST00000476395 DEFB130AP0DP74 79 aa5.61□□□□□ -1.51
VAPB-205ENST00000476395 GYPEP15421 78 aa5.61□□□□□ -1.51
VAPB-205ENST00000476395 C10orf25Q5T742 122 aa5.61□□□□□ -1.51
VAPB-205ENST00000476395 MUC7Q8TAX7 377 aa5.61□□□□□ -1.51
VAPB-205ENST00000476395 FAM229AH3BQW9 127 aa5.61□□□□□ -1.51
VAPB-205ENST00000476395 NDUFC1O43677 76 aa5.61□□□□□ -1.51
VAPB-205ENST00000476395 LYSTQ99698 3801 aa5.61□□□□□ -1.51
VAPB-205ENST00000476395 CELA1Q9UNI1 258 aa5.61□□□□□ -1.51
VAPB-205ENST00000476395 ZNF706Q9Y5V0 76 aaPredicted RBP5.61□□□□□ -1.51
VAPB-205ENST00000476395 IGHV4-28A0A0C4DH34 117 aa5.61□□□□□ -1.51
VAPB-205ENST00000476395 PRR4Q16378 134 aa5.6□□□□□ -1.51
VAPB-205ENST00000476395 LOC110117498A0A087WWA1 95 aa5.6□□□□□ -1.51
VAPB-205ENST00000476395 PSPHP1O15172 72 aa5.6□□□□□ -1.51
VAPB-205ENST00000476395 Q6ZTC4 211 aa5.6□□□□□ -1.51
VAPB-205ENST00000476395 UBE2AP49459 152 aa5.59□□□□□ -1.51
VAPB-205ENST00000476395 PRYO14603 147 aa5.59□□□□□ -1.52
VAPB-205ENST00000476395 CMC4P56277 68 aaPredicted RBP5.59□□□□□ -1.52
VAPB-205ENST00000476395 C7orf65Q6ZTY9 151 aa5.59□□□□□ -1.52
VAPB-205ENST00000476395 CXCL6P80162 114 aa5.58□□□□□ -1.52
VAPB-205ENST00000476395 CSMD3Q7Z407 3707 aa5.58□□□□□ -1.52
VAPB-205ENST00000476395 C3orf84H3BNL1 204 aa5.58□□□□□ -1.52
VAPB-205ENST00000476395 TNP2Q05952 138 aa5.58□□□□□ -1.52
VAPB-205ENST00000476395 DEFB4AO15263 64 aa5.57□□□□□ -1.52
VAPB-205ENST00000476395 UNQ6190/PRO20217Q6UXQ8 127 aa5.57□□□□□ -1.52
VAPB-205ENST00000476395 XAGE1AQ9HD64 81 aa5.57□□□□□ -1.52
VAPB-205ENST00000476395 FAM30AQ9NZY2 134 aa5.57□□□□□ -1.52
VAPB-205ENST00000476395 KLK12Q9UKR0 248 aa5.57□□□□□ -1.52
VAPB-205ENST00000476395 Q6ZRP5 223 aa5.57□□□□□ -1.52
VAPB-205ENST00000476395 IGKV4-1P06312 121 aa5.57□□□□□ -1.52
VAPB-205ENST00000476395 LINC00313P59037 77 aa5.57□□□□□ -1.52
VAPB-205ENST00000476395 CHCHD10Q8WYQ3 142 aaPredicted RBP5.56□□□□□ -1.52
VAPB-205ENST00000476395 OCR1Q9BZK8 76 aa5.56□□□□□ -1.52
VAPB-205ENST00000476395 PHF5AQ7RTV0 110 aaKnown RBP5.56□□□□□ -1.52
VAPB-205ENST00000476395 PRO0255Q9UI72 69 aa5.56□□□□□ -1.52
VAPB-205ENST00000476395 BCE1O60756 84 aa5.56□□□□□ -1.52
VAPB-205ENST00000476395 NOTCH1P46531 2555 aa5.55□□□□□ -1.52
VAPB-205ENST00000476395 REG3AQ06141 175 aa5.55□□□□□ -1.52
VAPB-205ENST00000476395 COX17Q14061 63 aa5.55□□□□□ -1.52
VAPB-205ENST00000476395 Q8NAQ8 132 aa5.55□□□□□ -1.52
VAPB-205ENST00000476395 IGLV6-57P01721 117 aa5.54□□□□□ -1.52
VAPB-205ENST00000476395 C9orf66Q5T8R8 295 aa5.54□□□□□ -1.52
VAPB-205ENST00000476395 LINC01554Q52M75 96 aa5.54□□□□□ -1.52
VAPB-205ENST00000476395 DIRC1Q969H9 104 aa5.54□□□□□ -1.52
VAPB-205ENST00000476395 DNAH10Q8IVF4 4471 aa5.54□□□□□ -1.52
VAPB-205ENST00000476395 C1orf64Q8NEQ6 169 aa5.54□□□□□ -1.52
VAPB-205ENST00000476395 PRR34Q9NV39 138 aa5.54□□□□□ -1.52
VAPB-205ENST00000476395 SMIM29Q86T20 159 aa5.53□□□□□ -1.52
VAPB-205ENST00000476395 TENM3Q9P273 2699 aa5.53□□□□□ -1.52
VAPB-205ENST00000476395 KRTAP26-1Q6PEX3 210 aa5.53□□□□□ -1.52
VAPB-205ENST00000476395 A0A0J9YWU9 116 aa5.52□□□□□ -1.53
VAPB-205ENST00000476395 H0Y9J4 135 aa5.52□□□□□ -1.53
VAPB-205ENST00000476395 IGHV4-30-4P0DP06 118 aa5.52□□□□□ -1.53
VAPB-205ENST00000476395 hDV103S1A0JD37 113 aa5.52□□□□□ -1.53
VAPB-205ENST00000476395 DEFB135Q30KP9 77 aa5.52□□□□□ -1.53
VAPB-205ENST00000476395 ATP11AUNQ6ZP68 121 aa5.52□□□□□ -1.53
VAPB-205ENST00000476395 ANGP03950 147 aaKnown RBP5.51□□□□□ -1.53
VAPB-205ENST00000476395 DNAH9Q9NYC9 4486 aa5.51□□□□□ -1.53
VAPB-205ENST00000476395 C6orf48Q9UBA6 75 aa5.51□□□□□ -1.53
VAPB-205ENST00000476395 TRAV22A0A0B4J277 110 aa5.5□□□□□ -1.53
VAPB-205ENST00000476395 DEFB105AQ8NG35 78 aa5.5□□□□□ -1.53
VAPB-205ENST00000476395 MGAM2Q2M2H8 2515 aa5.49□□□□□ -1.53
VAPB-205ENST00000476395 NBEAL1Q6ZS30 2694 aa5.49□□□□□ -1.53
VAPB-205ENST00000476395 Q1T7F1 81 aa5.49□□□□□ -1.53
VAPB-205ENST00000476395 DNAH7Q8WXX0 4024 aa5.49□□□□□ -1.53
VAPB-205ENST00000476395 GVQW2A0A096LPI5 108 aaPredicted RBP5.49□□□□□ -1.53
VAPB-205ENST00000476395 CHKB-CPT1BH3BT56 60 aa5.49□□□□□ -1.53
VAPB-205ENST00000476395 SPAG11BQ08648 103 aa5.49□□□□□ -1.53
VAPB-205ENST00000476395 SYCNQ0VAF6 134 aa5.49□□□□□ -1.53
VAPB-205ENST00000476395 COX7BP24311 80 aa5.48□□□□□ -1.53
VAPB-205ENST00000476395 ST20-AS1Q8NBB2 130 aa5.48□□□□□ -1.53
VAPB-205ENST00000476395 HUWE1Q7Z6Z7 4374 aaKnown RBP5.47□□□□□ -1.53
VAPB-205ENST00000476395 HCG22E2RYF7 251 aa5.47□□□□□ -1.53
VAPB-205ENST00000476395 DEFB116Q30KQ4 102 aa5.47□□□□□ -1.53
VAPB-205ENST00000476395 ERC2-IT1O76042 136 aa5.46□□□□□ -1.53
VAPB-205ENST00000476395 LELP1Q5T871 98 aa5.46□□□□□ -1.53
VAPB-205ENST00000476395 PDE6GP18545 87 aa5.46□□□□□ -1.54
VAPB-205ENST00000476395 A0A0G2JQZ4 141 aa5.46□□□□□ -1.54
VAPB-205ENST00000476395 A0A1W2PNN7 141 aa5.46□□□□□ -1.54
VAPB-205ENST00000476395 ELOF1P60002 83 aaKnown RBP5.45□□□□□ -1.54
VAPB-205ENST00000476395 HIGD2BQ4VC39 106 aa5.45□□□□□ -1.54
VAPB-205ENST00000476395 C15orf56Q8N910 161 aa5.45□□□□□ -1.54
VAPB-205ENST00000476395 A6NN06 94 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms