RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 CDC42BPGQ6DT37 1551 aa0.61□□□□□ -2.31
TM9SF3-204ENST00000475401 RICTORQ6R327 1708 aa0.61□□□□□ -2.31
TM9SF3-204ENST00000475401 WIZO95785 1651 aa0.6□□□□□ -2.31
TM9SF3-204ENST00000475401 ASXL1Q8IXJ9 1541 aa0.59□□□□□ -2.31
TM9SF3-204ENST00000475401 SPTBN1Q01082 2364 aaKnown RBP0.59□□□□□ -2.31
TM9SF3-204ENST00000475401 LELP1Q5T871 98 aa0.59□□□□□ -2.31
TM9SF3-204ENST00000475401 LMTK2Q8IWU2 1503 aa0.59□□□□□ -2.32
TM9SF3-204ENST00000475401 ABCA9Q8IUA7 1624 aa0.58□□□□□ -2.32
TM9SF3-204ENST00000475401 SPINK4O60575 86 aa0.58□□□□□ -2.32
TM9SF3-204ENST00000475401 KLK9Q2XQG4 91 aa0.58□□□□□ -2.32
TM9SF3-204ENST00000475401 DIP2AQ14689 1571 aa0.57□□□□□ -2.32
TM9SF3-204ENST00000475401 GVINP1Q7Z2Y8 2422 aa0.57□□□□□ -2.32
TM9SF3-204ENST00000475401 NDUFA4O00483 81 aa0.57□□□□□ -2.32
TM9SF3-204ENST00000475401 U3KQA8 63 aa0.57□□□□□ -2.32
TM9SF3-204ENST00000475401 TENM4Q6N022 2769 aa0.57□□□□□ -2.32
TM9SF3-204ENST00000475401 MADDQ8WXG6 1647 aa0.56□□□□□ -2.32
TM9SF3-204ENST00000475401 CDKN2A-AS1Q9UH64 79 aa0.56□□□□□ -2.32
TM9SF3-204ENST00000475401 MROH1Q8NDA8 1641 aa0.56□□□□□ -2.32
TM9SF3-204ENST00000475401 NHSQ6T4R5 1651 aa0.56□□□□□ -2.32
TM9SF3-204ENST00000475401 VWFP04275 2813 aa0.56□□□□□ -2.32
TM9SF3-204ENST00000475401 PHGR1C9JFL3 82 aa0.55□□□□□ -2.32
TM9SF3-204ENST00000475401 PKDREJQ9NTG1 2253 aa0.55□□□□□ -2.32
TM9SF3-204ENST00000475401 EFCAB5A4FU69 1503 aa0.54□□□□□ -2.32
TM9SF3-204ENST00000475401 AKAP6Q13023 2319 aa0.54□□□□□ -2.32
TM9SF3-204ENST00000475401 DDX60LQ5H9U9 1706 aaKnown RBP0.54□□□□□ -2.32
TM9SF3-204ENST00000475401 RNF17Q9BXT8 1623 aaKnown RBP0.53□□□□□ -2.32
TM9SF3-204ENST00000475401 TJP1Q07157 1748 aa0.53□□□□□ -2.32
TM9SF3-204ENST00000475401 CNOT1A5YKK6 2376 aaKnown RBP0.53□□□□□ -2.32
TM9SF3-204ENST00000475401 H3BVH4 76 aa0.53□□□□□ -2.32
TM9SF3-204ENST00000475401 NDUFA3O95167 84 aa0.53□□□□□ -2.32
TM9SF3-204ENST00000475401 C4AP0C0L4 1744 aa0.52□□□□□ -2.33
TM9SF3-204ENST00000475401 C4BP0C0L5 1744 aa0.52□□□□□ -2.33
TM9SF3-204ENST00000475401 NRAPQ86VF7 1730 aa0.52□□□□□ -2.33
TM9SF3-204ENST00000475401 LRP1Q07954 4544 aaKnown RBP0.52□□□□□ -2.33
TM9SF3-204ENST00000475401 SMIM31A0A1B0GVY4 71 aa0.52□□□□□ -2.33
TM9SF3-204ENST00000475401 FXYD6Q9H0Q3 95 aa0.52□□□□□ -2.33
TM9SF3-204ENST00000475401 HILPDAQ9Y5L2 63 aa0.52□□□□□ -2.33
TM9SF3-204ENST00000475401 INO80Q9ULG1 1556 aaPredicted RBP0.52□□□□□ -2.33
TM9SF3-204ENST00000475401 ERICH3Q5RHP9 1530 aa0.51□□□□□ -2.33
TM9SF3-204ENST00000475401 NAV2Q8IVL1 2488 aa0.51□□□□□ -2.33
TM9SF3-204ENST00000475401 OTOGQ6ZRI0 2925 aa0.51□□□□□ -2.33
TM9SF3-204ENST00000475401 CHD6Q8TD26 2715 aa0.51□□□□□ -2.33
TM9SF3-204ENST00000475401 ZFYVE26Q68DK2 2539 aa0.5□□□□□ -2.33
TM9SF3-204ENST00000475401 WFDC13Q8IUB5 93 aa0.5□□□□□ -2.33
TM9SF3-204ENST00000475401 RALGAPBQ86X10 1494 aa0.49□□□□□ -2.33
TM9SF3-204ENST00000475401 UNC79Q9P2D8 2635 aa0.49□□□□□ -2.33
TM9SF3-204ENST00000475401 ATXN8Q156A1 80 aa0.49□□□□□ -2.33
TM9SF3-204ENST00000475401 KCNQ1DNQ9H478 68 aa0.49□□□□□ -2.33
TM9SF3-204ENST00000475401 IGF2RP11717 2491 aa0.49□□□□□ -2.33
TM9SF3-204ENST00000475401 FAT2Q9NYQ8 4349 aa0.48□□□□□ -2.33
TM9SF3-204ENST00000475401 AHNAKQ09666 5890 aaKnown RBP0.48□□□□□ -2.33
TM9SF3-204ENST00000475401 ENHOQ6UWT2 76 aa0.47□□□□□ -2.33
TM9SF3-204ENST00000475401 PLXNC1O60486 1568 aa0.47□□□□□ -2.33
TM9SF3-204ENST00000475401 TNXBP22105 4242 aa0.46□□□□□ -2.34
TM9SF3-204ENST00000475401 A0A087WWC5 75 aa0.46□□□□□ -2.34
TM9SF3-204ENST00000475401 DEFB131BA0A096LNP1 70 aa0.46□□□□□ -2.34
TM9SF3-204ENST00000475401 C3orf79P0CE67 100 aa0.45□□□□□ -2.34
TM9SF3-204ENST00000475401 PRO3102Q9H379 93 aa0.45□□□□□ -2.34
TM9SF3-204ENST00000475401 HUWE1Q7Z6Z7 4374 aaKnown RBP0.45□□□□□ -2.34
TM9SF3-204ENST00000475401 FAT4Q6V0I7 4981 aa0.45□□□□□ -2.34
TM9SF3-204ENST00000475401 HFM1A2PYH4 1435 aa0.45□□□□□ -2.34
TM9SF3-204ENST00000475401 BSNQ9UPA5 3926 aa0.45□□□□□ -2.34
TM9SF3-204ENST00000475401 WNK2Q9Y3S1 2297 aa0.44□□□□□ -2.34
TM9SF3-204ENST00000475401 NCOR1O75376 2440 aa0.44□□□□□ -2.34
TM9SF3-204ENST00000475401 PRM1P04553 51 aa0.44□□□□□ -2.34
TM9SF3-204ENST00000475401 DEPDC5O75140 1603 aa0.44□□□□□ -2.34
TM9SF3-204ENST00000475401 ATRQ13535 2644 aa0.44□□□□□ -2.34
TM9SF3-204ENST00000475401 THOC2Q8NI27 1593 aaKnown RBP0.44□□□□□ -2.34
TM9SF3-204ENST00000475401 CCDC180Q9P1Z9 1646 aa0.43□□□□□ -2.34
TM9SF3-204ENST00000475401 H0YAA0 97 aa0.43□□□□□ -2.34
TM9SF3-204ENST00000475401 PRKDCP78527 4128 aaKnown RBP0.42□□□□□ -2.34
TM9SF3-204ENST00000475401 UBL5Q9BZL1 73 aa0.42□□□□□ -2.34
TM9SF3-204ENST00000475401 CSPG4Q6UVK1 2322 aa0.41□□□□□ -2.34
TM9SF3-204ENST00000475401 LINC00158P58513 81 aa0.41□□□□□ -2.34
TM9SF3-204ENST00000475401 MUC5BQ9HC84 5762 aaPredicted RBP0.4□□□□□ -2.35
TM9SF3-204ENST00000475401 ABCA6Q8N139 1617 aa0.4□□□□□ -2.35
TM9SF3-204ENST00000475401 LYNX1G3V0Z9 82 aa0.4□□□□□ -2.35
TM9SF3-204ENST00000475401 MRPL33O75394 65 aaKnown RBP0.4□□□□□ -2.35
TM9SF3-204ENST00000475401 GNG13Q9P2W3 67 aa0.4□□□□□ -2.35
TM9SF3-204ENST00000475401 MYCBP2O75592 4640 aa0.4□□□□□ -2.35
TM9SF3-204ENST00000475401 REV3LO60673 3130 aa0.39□□□□□ -2.35
TM9SF3-204ENST00000475401 DEFB114Q30KQ6 69 aa0.39□□□□□ -2.35
TM9SF3-204ENST00000475401 C3P01024 1663 aa0.39□□□□□ -2.35
TM9SF3-204ENST00000475401 CRIP1P50238 77 aa0.38□□□□□ -2.35
TM9SF3-204ENST00000475401 PKD1L1Q8TDX9 2849 aa0.38□□□□□ -2.35
TM9SF3-204ENST00000475401 NCOR2Q9Y618 2525 aa0.38□□□□□ -2.35
TM9SF3-204ENST00000475401 MAST4O15021 2626 aa0.37□□□□□ -2.35
TM9SF3-204ENST00000475401 SPTA1P02549 2419 aa0.37□□□□□ -2.35
TM9SF3-204ENST00000475401 HRNRQ86YZ3 2850 aaPredicted RBP0.37□□□□□ -2.35
TM9SF3-204ENST00000475401 HIVEP3Q5T1R4 2406 aa0.37□□□□□ -2.35
TM9SF3-204ENST00000475401 ABCC6O95255 1503 aa0.37□□□□□ -2.35
TM9SF3-204ENST00000475401 CELSR1Q9NYQ6 3014 aa0.37□□□□□ -2.35
TM9SF3-204ENST00000475401 ETDCA0A1B0GVM5 59 aa0.36□□□□□ -2.35
TM9SF3-204ENST00000475401 SPRR2DP22532 72 aa0.36□□□□□ -2.35
TM9SF3-204ENST00000475401 GLI2P10070 1586 aa0.36□□□□□ -2.35
TM9SF3-204ENST00000475401 KNL1Q8NG31 2342 aa0.35□□□□□ -2.35
TM9SF3-204ENST00000475401 LINC01549A6NIU2 74 aa0.35□□□□□ -2.35
TM9SF3-204ENST00000475401 M0R2T5 61 aa0.35□□□□□ -2.35
TM9SF3-204ENST00000475401 MUC5ACP98088 5654 aa0.35□□□□□ -2.35
TM9SF3-204ENST00000475401 TIAM1Q13009 1591 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms