RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 DEFB112Q30KQ8 113 aa-0.74□□□□□ -2.53
LTN1-204ENST00000475344 HEPN1Q6WQI6 88 aa-0.74□□□□□ -2.53
LTN1-204ENST00000475344 TCEAL7Q9BRU2 100 aa-0.74□□□□□ -2.53
LTN1-204ENST00000475344 PKHD1L1Q86WI1 4243 aa-0.74□□□□□ -2.53
LTN1-204ENST00000475344 KALRNO60229 2985 aa-0.75□□□□□ -2.53
LTN1-204ENST00000475344 MYO18BQ8IUG5 2567 aa-0.75□□□□□ -2.53
LTN1-204ENST00000475344 CUBNO60494 3623 aa-0.75□□□□□ -2.53
LTN1-204ENST00000475344 SPTY2D1-AS1A0A0U1RR47 76 aa-0.75□□□□□ -2.53
LTN1-204ENST00000475344 RBP2P50120 134 aa-0.75□□□□□ -2.53
LTN1-204ENST00000475344 PLECQ15149 4684 aaKnown RBP-0.75□□□□□ -2.53
LTN1-204ENST00000475344 COL5A1-AS1Q5SY13 56 aa-0.75□□□□□ -2.53
LTN1-204ENST00000475344 ABCC2Q92887 1545 aa-0.75□□□□□ -2.53
LTN1-204ENST00000475344 PKD1L3Q7Z443 1732 aa-0.75□□□□□ -2.53
LTN1-204ENST00000475344 LAMA3Q16787 3333 aa-0.76□□□□□ -2.53
LTN1-204ENST00000475344 LAMA1P25391 3075 aa-0.76□□□□□ -2.53
LTN1-204ENST00000475344 F8WEM9 126 aa-0.76□□□□□ -2.53
LTN1-204ENST00000475344 CCL22O00626 93 aa-0.76□□□□□ -2.53
LTN1-204ENST00000475344 IGLC2P0DOY2 106 aa-0.76□□□□□ -2.53
LTN1-204ENST00000475344 IGLC3P0DOY3 106 aa-0.76□□□□□ -2.53
LTN1-204ENST00000475344 FAUP35544 74 aaKnown RBP-0.76□□□□□ -2.53
LTN1-204ENST00000475344 CLTCQ00610 1675 aaKnown RBP-0.76□□□□□ -2.53
LTN1-204ENST00000475344 FASNP49327 2511 aaKnown RBP-0.77□□□□□ -2.53
LTN1-204ENST00000475344 PEG3Q9GZU2 1588 aa-0.77□□□□□ -2.53
LTN1-204ENST00000475344 FYCO1Q9BQS8 1478 aa-0.77□□□□□ -2.53
LTN1-204ENST00000475344 D6R8Y8 96 aa-0.77□□□□□ -2.53
LTN1-204ENST00000475344 LEPROTL1O95214 131 aa-0.77□□□□□ -2.53
LTN1-204ENST00000475344 ETDBQ3ZM63 59 aa-0.77□□□□□ -2.53
LTN1-204ENST00000475344 WFDC13Q8IUB5 93 aa-0.77□□□□□ -2.53
LTN1-204ENST00000475344 MUSTN1Q8IVN3 82 aa-0.77□□□□□ -2.53
LTN1-204ENST00000475344 ANK3Q12955 4377 aaKnown RBP-0.77□□□□□ -2.53
LTN1-204ENST00000475344 NIPBLQ6KC79 2804 aaeCLIP-0.78□□□□□ -2.53
LTN1-204ENST00000475344 TEX14Q8IWB6 1497 aa-0.78□□□□□ -2.53
LTN1-204ENST00000475344 CNTLNQ9NXG0 1405 aa-0.78□□□□□ -2.53
LTN1-204ENST00000475344 LINC00032P0C843 101 aa-0.78□□□□□ -2.53
LTN1-204ENST00000475344 HMGN3Q15651 99 aa-0.78□□□□□ -2.53
LTN1-204ENST00000475344 NCMAPQ5T1S8 102 aa-0.78□□□□□ -2.53
LTN1-204ENST00000475344 DPY30Q9C005 99 aa-0.78□□□□□ -2.53
LTN1-204ENST00000475344 CDKN2A-AS1Q9UH64 79 aa-0.78□□□□□ -2.53
LTN1-204ENST00000475344 QSER1Q2KHR3 1735 aa-0.78□□□□□ -2.53
LTN1-204ENST00000475344 CLIP1P30622 1438 aa-0.79□□□□□ -2.54
LTN1-204ENST00000475344 UQCRHLA0A096LP55 91 aa-0.79□□□□□ -2.54
LTN1-204ENST00000475344 ZNF720Q7Z2F6 126 aa-0.79□□□□□ -2.54
LTN1-204ENST00000475344 ACBD7Q8N6N7 88 aa-0.79□□□□□ -2.54
LTN1-204ENST00000475344 HIGD1BQ9P298 99 aa-0.79□□□□□ -2.54
LTN1-204ENST00000475344 DNAH7Q8WXX0 4024 aa-0.8□□□□□ -2.54
LTN1-204ENST00000475344 ALKAL2Q6UX46 152 aa-0.8□□□□□ -2.54
LTN1-204ENST00000475344 ADAMTS12P58397 1594 aa-0.81□□□□□ -2.54
LTN1-204ENST00000475344 SPRR2FQ96RM1 72 aa-0.81□□□□□ -2.54
LTN1-204ENST00000475344 DYNC1H1Q14204 4646 aaKnown RBP-0.81□□□□□ -2.54
LTN1-204ENST00000475344 APOBP04114 4563 aaKnown RBP-0.81□□□□□ -2.54
LTN1-204ENST00000475344 PTPN23Q9H3S7 1636 aa-0.82□□□□□ -2.54
LTN1-204ENST00000475344 VPS13BQ7Z7G8 4022 aa-0.82□□□□□ -2.54
LTN1-204ENST00000475344 ANKRD26Q9UPS8 1709 aa-0.82□□□□□ -2.54
LTN1-204ENST00000475344 AKAP12Q02952 1782 aa-0.83□□□□□ -2.54
LTN1-204ENST00000475344 RGPD1P0DJD0 1748 aa-0.83□□□□□ -2.54
LTN1-204ENST00000475344 ANKRD11Q6UB99 2663 aaPredicted RBP-0.83□□□□□ -2.54
LTN1-204ENST00000475344 KRTAP19-6Q3LI70 58 aa-0.83□□□□□ -2.54
LTN1-204ENST00000475344 UBE2D4Q9Y2X8 147 aa-0.83□□□□□ -2.54
LTN1-204ENST00000475344 UBR1Q8IWV7 1749 aa-0.84□□□□□ -2.54
LTN1-204ENST00000475344 DNAH1Q9P2D7 4330 aa-0.84□□□□□ -2.54
LTN1-204ENST00000475344 MAGI2Q86UL8 1455 aa-0.84□□□□□ -2.54
LTN1-204ENST00000475344 ITPR2Q14571 2701 aa-0.84□□□□□ -2.54
LTN1-204ENST00000475344 CMYA5Q8N3K9 4069 aa-0.84□□□□□ -2.54
LTN1-204ENST00000475344 CICQ96RK0 1608 aaPredicted RBP-0.85□□□□□ -2.55
LTN1-204ENST00000475344 M0R143 59 aa-0.85□□□□□ -2.55
LTN1-204ENST00000475344 PREX1Q8TCU6 1659 aa-0.85□□□□□ -2.55
LTN1-204ENST00000475344 GCN1Q92616 2671 aaKnown RBP-0.86□□□□□ -2.55
LTN1-204ENST00000475344 MT1HL1P0DM35 61 aa-0.86□□□□□ -2.55
LTN1-204ENST00000475344 COX7BP24311 80 aa-0.86□□□□□ -2.55
LTN1-204ENST00000475344 EPRSP07814 1512 aaKnown RBP-0.86□□□□□ -2.55
LTN1-204ENST00000475344 RGPD4Q7Z3J3 1758 aa-0.86□□□□□ -2.55
LTN1-204ENST00000475344 ALKQ9UM73 1620 aa-0.86□□□□□ -2.55
LTN1-204ENST00000475344 LRRK2Q5S007 2527 aa-0.86□□□□□ -2.55
LTN1-204ENST00000475344 ABCC10Q5T3U5 1492 aa-0.86□□□□□ -2.55
LTN1-204ENST00000475344 C4AP0C0L4 1744 aa-0.86□□□□□ -2.55
LTN1-204ENST00000475344 C4BP0C0L5 1744 aa-0.86□□□□□ -2.55
LTN1-204ENST00000475344 EYSQ5T1H1 3165 aa-0.87□□□□□ -2.55
LTN1-204ENST00000475344 H0YGG7 62 aa-0.87□□□□□ -2.55
LTN1-204ENST00000475344 NBEAQ8NFP9 2946 aa-0.87□□□□□ -2.55
LTN1-204ENST00000475344 SACSQ9NZJ4 4579 aa-0.87□□□□□ -2.55
LTN1-204ENST00000475344 ITPR1Q14643 2758 aa-0.87□□□□□ -2.55
LTN1-204ENST00000475344 RGPD3A6NKT7 1758 aaPredicted RBP-0.88□□□□□ -2.55
LTN1-204ENST00000475344 DNAH11Q96DT5 4516 aa-0.88□□□□□ -2.55
LTN1-204ENST00000475344 SUPT6HQ7KZ85 1726 aaKnown RBP-0.88□□□□□ -2.55
LTN1-204ENST00000475344 NDUFA3O95167 84 aa-0.88□□□□□ -2.55
LTN1-204ENST00000475344 NMSQ5H8A3 153 aa-0.88□□□□□ -2.55
LTN1-204ENST00000475344 FANCAO15360 1455 aa-0.88□□□□□ -2.55
LTN1-204ENST00000475344 ATP10BO94823 1461 aa-0.88□□□□□ -2.55
LTN1-204ENST00000475344 RGPD8O14715 1765 aaPredicted RBP-0.88□□□□□ -2.55
LTN1-204ENST00000475344 RGPD5Q99666 1765 aa-0.88□□□□□ -2.55
LTN1-204ENST00000475344 LRRC7Q96NW7 1537 aa-0.89□□□□□ -2.55
LTN1-204ENST00000475344 DEFA5Q01523 94 aa-0.89□□□□□ -2.55
LTN1-204ENST00000475344 C20orf78Q9BR46 151 aa-0.89□□□□□ -2.55
LTN1-204ENST00000475344 SNHG12Q9BXW3 62 aa-0.89□□□□□ -2.55
LTN1-204ENST00000475344 CCDC168Q8NDH2 2452 aa-0.89□□□□□ -2.55
LTN1-204ENST00000475344 TEX15Q9BXT5 2789 aa-0.89□□□□□ -2.55
LTN1-204ENST00000475344 DNAH5Q8TE73 4624 aa-0.89□□□□□ -2.55
LTN1-204ENST00000475344 SRCAPQ6ZRS2 3230 aa-0.9□□□□□ -2.55
LTN1-204ENST00000475344 ACACAQ13085 2346 aa-0.9□□□□□ -2.55
LTN1-204ENST00000475344 HMGN2P05204 90 aaKnown RBP-0.9□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms