RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 LITAFQ99732 161 aa7.28□□□□□ -1.24
VAPB-204ENST00000475243 COX6B2Q6YFQ2 88 aa7.28□□□□□ -1.24
VAPB-204ENST00000475243 MRPL34Q9BQ48 92 aaKnown RBP7.28□□□□□ -1.24
VAPB-204ENST00000475243 ANAPC11Q9NYG5 84 aa7.28□□□□□ -1.24
VAPB-204ENST00000475243 H3BPC8 53 aa7.28□□□□□ -1.24
VAPB-204ENST00000475243 FLNBO75369 2602 aaKnown RBP7.27□□□□□ -1.25
VAPB-204ENST00000475243 IGLV1-50A0A075B6I6 118 aa7.27□□□□□ -1.25
VAPB-204ENST00000475243 OBSCN-AS1Q96MR7 158 aa7.27□□□□□ -1.25
VAPB-204ENST00000475243 EIF4EBP3O60516 100 aaPredicted RBP7.26□□□□□ -1.25
VAPB-204ENST00000475243 SSBP3-AS1Q7Z2R9 100 aa7.26□□□□□ -1.25
VAPB-204ENST00000475243 LINC01600Q96MT4 127 aa7.25□□□□□ -1.25
VAPB-204ENST00000475243 IGFL1Q6UW32 110 aa7.25□□□□□ -1.25
VAPB-204ENST00000475243 APLNQ9ULZ1 77 aa7.24□□□□□ -1.25
VAPB-204ENST00000475243 C8orf87E5RJ46 101 aa7.24□□□□□ -1.25
VAPB-204ENST00000475243 COA5Q86WW8 74 aa7.24□□□□□ -1.25
VAPB-204ENST00000475243 AKAP13Q12802 2813 aa7.24□□□□□ -1.25
VAPB-204ENST00000475243 LOC101927531A0A1B0GV80 90 aa7.23□□□□□ -1.25
VAPB-204ENST00000475243 KRTAP10-3P60369 221 aa7.23□□□□□ -1.25
VAPB-204ENST00000475243 C15orf56Q8N910 161 aa7.23□□□□□ -1.25
VAPB-204ENST00000475243 KCNQ1DNQ9H478 68 aa7.23□□□□□ -1.25
VAPB-204ENST00000475243 LINC00304Q8N9R0 145 aa7.22□□□□□ -1.25
VAPB-204ENST00000475243 C9orf129Q5T035 196 aaKnown RBP7.22□□□□□ -1.25
VAPB-204ENST00000475243 A0A0C4DFX4 3053 aa7.21□□□□□ -1.26
VAPB-204ENST00000475243 HECTD1Q9ULT8 2610 aa7.21□□□□□ -1.26
VAPB-204ENST00000475243 RPS28P62857 69 aaKnown RBP7.21□□□□□ -1.26
VAPB-204ENST00000475243 Q8N377 158 aa7.21□□□□□ -1.26
VAPB-204ENST00000475243 ZNF861PO60384 105 aa7.21□□□□□ -1.26
VAPB-204ENST00000475243 A8MUN3 132 aa7.2□□□□□ -1.26
VAPB-204ENST00000475243 ATRQ13535 2644 aa7.2□□□□□ -1.26
VAPB-204ENST00000475243 LINC00528Q8N1L1 170 aa7.2□□□□□ -1.26
VAPB-204ENST00000475243 BRCA2P51587 3418 aa7.19□□□□□ -1.26
VAPB-204ENST00000475243 A0A087WTM6 91 aa7.18□□□□□ -1.26
VAPB-204ENST00000475243 GIG44P09565 113 aaPredicted RBP7.18□□□□□ -1.26
VAPB-204ENST00000475243 C8orf17Q9NRJ1 99 aa7.18□□□□□ -1.26
VAPB-204ENST00000475243 LAMA3Q16787 3333 aa7.18□□□□□ -1.26
VAPB-204ENST00000475243 CHD7Q9P2D1 2997 aa7.18□□□□□ -1.26
VAPB-204ENST00000475243 MAST4O15021 2626 aa7.18□□□□□ -1.26
VAPB-204ENST00000475243 PRR15Q8IV56 129 aa7.17□□□□□ -1.26
VAPB-204ENST00000475243 C19orf73Q9NVV2 129 aa7.17□□□□□ -1.26
VAPB-204ENST00000475243 PRUNE2Q8WUY3 3088 aa7.17□□□□□ -1.26
VAPB-204ENST00000475243 FLG2Q5D862 2391 aaPredicted RBP7.17□□□□□ -1.26
VAPB-204ENST00000475243 PRR34Q9NV39 138 aa7.16□□□□□ -1.26
VAPB-204ENST00000475243 CELSR3Q9NYQ7 3312 aa7.16□□□□□ -1.26
VAPB-204ENST00000475243 A0A1B0GVX0 72 aa7.16□□□□□ -1.26
VAPB-204ENST00000475243 ITPR3Q14573 2671 aa7.16□□□□□ -1.26
VAPB-204ENST00000475243 KLK9Q2XQG4 91 aa7.15□□□□□ -1.26
VAPB-204ENST00000475243 CASC10Q5T4H9 136 aa7.15□□□□□ -1.26
VAPB-204ENST00000475243 UQCR11O14957 56 aa7.15□□□□□ -1.27
VAPB-204ENST00000475243 FLNAP21333 2647 aaKnown RBP7.15□□□□□ -1.27
VAPB-204ENST00000475243 LINC01554Q52M75 96 aa7.15□□□□□ -1.27
VAPB-204ENST00000475243 CFAP46Q8IYW2 2715 aa7.14□□□□□ -1.27
VAPB-204ENST00000475243 PSORS1C2Q9UIG4 136 aa7.13□□□□□ -1.27
VAPB-204ENST00000475243 IGLV5-37A0A075B6J1 123 aa7.12□□□□□ -1.27
VAPB-204ENST00000475243 ERC2-IT1O76042 136 aa7.12□□□□□ -1.27
VAPB-204ENST00000475243 MIR22HGQ0VDD5 57 aa7.12□□□□□ -1.27
VAPB-204ENST00000475243 C9orf163Q8N9P6 203 aa7.11□□□□□ -1.27
VAPB-204ENST00000475243 A0A096LNT2 108 aa7.11□□□□□ -1.27
VAPB-204ENST00000475243 IGLV7-43P04211 117 aa7.11□□□□□ -1.27
VAPB-204ENST00000475243 CRIPTQ9P021 101 aa7.11□□□□□ -1.27
VAPB-204ENST00000475243 TRIOO75962 3097 aa7.11□□□□□ -1.27
VAPB-204ENST00000475243 RANBP2P49792 3224 aaKnown RBP7.11□□□□□ -1.27
VAPB-204ENST00000475243 A0A0D9SG42 100 aa7.1□□□□□ -1.27
VAPB-204ENST00000475243 CENPEQ02224 2701 aa7.1□□□□□ -1.27
VAPB-204ENST00000475243 FREM2Q5SZK8 3169 aa7.1□□□□□ -1.27
VAPB-204ENST00000475243 Q8N1X5 172 aa7.09□□□□□ -1.27
VAPB-204ENST00000475243 RBM12B-AS1Q9P1G2 102 aa7.07□□□□□ -1.28
VAPB-204ENST00000475243 TLX1NBP0CAT3 122 aa7.06□□□□□ -1.28
VAPB-204ENST00000475243 CHD6Q8TD26 2715 aa7.06□□□□□ -1.28
VAPB-204ENST00000475243 CYP4F30PQ9H0H9 118 aa7.06□□□□□ -1.28
VAPB-204ENST00000475243 MGAQ8IWI9 3026 aa7.06□□□□□ -1.28
VAPB-204ENST00000475243 PLA2G2DQ9UNK4 145 aa7.05□□□□□ -1.28
VAPB-204ENST00000475243 HELZ2Q9BYK8 2649 aaKnown RBP7.05□□□□□ -1.28
VAPB-204ENST00000475243 SPRR4Q96PI1 79 aa7.05□□□□□ -1.28
VAPB-204ENST00000475243 WDFY4Q6ZS81 3184 aa7.04□□□□□ -1.28
VAPB-204ENST00000475243 IGLV5-48A0A075B6I7 105 aa7.04□□□□□ -1.28
VAPB-204ENST00000475243 LINC00612Q8N6U2 182 aa7.03□□□□□ -1.28
VAPB-204ENST00000475243 KLKP1Q107X0 134 aa7.02□□□□□ -1.29
VAPB-204ENST00000475243 ZNF575Q86XF7 245 aa7.02□□□□□ -1.29
VAPB-204ENST00000475243 KRTAP1-3Q8IUG1 177 aa7.02□□□□□ -1.29
VAPB-204ENST00000475243 A0A1W2PNM2 257 aa7.01□□□□□ -1.29
VAPB-204ENST00000475243 H7BZZ5 65 aa7.01□□□□□ -1.29
VAPB-204ENST00000475243 VPS13AQ96RL7 3174 aa7.01□□□□□ -1.29
VAPB-204ENST00000475243 TEX15Q9BXT5 2789 aa7□□□□□ -1.29
VAPB-204ENST00000475243 DNAH14Q0VDD8 3507 aa7□□□□□ -1.29
VAPB-204ENST00000475243 TNP2Q05952 138 aa6.99□□□□□ -1.29
VAPB-204ENST00000475243 CDH23Q9H251 3354 aa6.99□□□□□ -1.29
VAPB-204ENST00000475243 CNBPP62633 177 aaKnown RBP6.99□□□□□ -1.29
VAPB-204ENST00000475243 LINC00336Q6ZUF6 198 aa6.98□□□□□ -1.29
VAPB-204ENST00000475243 FAM104AQ969W3 186 aa6.98□□□□□ -1.29
VAPB-204ENST00000475243 UNC80Q8N2C7 3258 aa6.98□□□□□ -1.29
VAPB-204ENST00000475243 KRTAP1-1Q07627 177 aa6.95□□□□□ -1.3
VAPB-204ENST00000475243 HTTP42858 3142 aa6.95□□□□□ -1.3
VAPB-204ENST00000475243 CDC42SE1Q9NRR8 79 aa6.93□□□□□ -1.3
VAPB-204ENST00000475243 PRR26Q8N8Z3 221 aa6.92□□□□□ -1.3
VAPB-204ENST00000475243 Q6ZSA8 131 aa6.92□□□□□ -1.3
VAPB-204ENST00000475243 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.92□□□□□ -1.3
VAPB-204ENST00000475243 MAP1AP78559 2803 aaPredicted RBP6.91□□□□□ -1.3
VAPB-204ENST00000475243 REV3LO60673 3130 aa6.91□□□□□ -1.3
VAPB-204ENST00000475243 M0R2T5 61 aa6.9□□□□□ -1.3
VAPB-204ENST00000475243 STAB1Q9NY15 2570 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms