RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 DEFB113Q30KQ7 82 aa1.56□□□□□ -2.16
TMEM50B-208ENST00000474272 LINC01554Q52M75 96 aa1.56□□□□□ -2.16
TMEM50B-208ENST00000474272 C10orf99Q6UWK7 81 aa1.56□□□□□ -2.16
TMEM50B-208ENST00000474272 CASC2Q6XLA1 102 aa1.56□□□□□ -2.16
TMEM50B-208ENST00000474272 Q8N814 137 aa1.56□□□□□ -2.16
TMEM50B-208ENST00000474272 DEFB104AQ8WTQ1 72 aa1.56□□□□□ -2.16
TMEM50B-208ENST00000474272 ZCCHC13Q8WW36 166 aaKnown RBP1.56□□□□□ -2.16
TMEM50B-208ENST00000474272 DIRC1Q969H9 104 aa1.56□□□□□ -2.16
TMEM50B-208ENST00000474272 LIMD2Q9BT23 127 aa1.56□□□□□ -2.16
TMEM50B-208ENST00000474272 XAGE1AQ9HD64 81 aa1.56□□□□□ -2.16
TMEM50B-208ENST00000474272 MUC3AQ02505 3323 aa1.56□□□□□ -2.16
TMEM50B-208ENST00000474272 MUC4Q99102 2169 aa1.55□□□□□ -2.16
TMEM50B-208ENST00000474272 ZFHX4Q86UP3 3567 aa1.55□□□□□ -2.16
TMEM50B-208ENST00000474272 IGLV10-54A0A075B6I4 117 aa1.55□□□□□ -2.16
TMEM50B-208ENST00000474272 TRGV2A0A075B6R0 118 aa1.55□□□□□ -2.16
TMEM50B-208ENST00000474272 LOC110117498A0A087WWA1 95 aa1.55□□□□□ -2.16
TMEM50B-208ENST00000474272 GVQW2A0A096LPI5 108 aaPredicted RBP1.55□□□□□ -2.16
TMEM50B-208ENST00000474272 TRGV4A0A0C4DH28 118 aa1.55□□□□□ -2.16
TMEM50B-208ENST00000474272 F8WEM9 126 aa1.55□□□□□ -2.16
TMEM50B-208ENST00000474272 NDUFB1O75438 58 aa1.55□□□□□ -2.16
TMEM50B-208ENST00000474272 ERC2-IT1O76042 136 aa1.55□□□□□ -2.16
TMEM50B-208ENST00000474272 Q6ZTI0 123 aa1.55□□□□□ -2.16
TMEM50B-208ENST00000474272 FP248Q71RG6 208 aaPredicted RBP1.55□□□□□ -2.16
TMEM50B-208ENST00000474272 SMCR5Q8TEV8 140 aa1.55□□□□□ -2.16
TMEM50B-208ENST00000474272 UBL5Q9BZL1 73 aa1.55□□□□□ -2.16
TMEM50B-208ENST00000474272 NOP10Q9NPE3 64 aaKnown RBP1.55□□□□□ -2.16
TMEM50B-208ENST00000474272 LINC00846Q9NV44 126 aa1.55□□□□□ -2.16
TMEM50B-208ENST00000474272 PRO0255Q9UI72 69 aa1.55□□□□□ -2.16
TMEM50B-208ENST00000474272 DSPP15924 2871 aaKnown RBP1.54□□□□□ -2.16
TMEM50B-208ENST00000474272 WDFY4Q6ZS81 3184 aa1.54□□□□□ -2.16
TMEM50B-208ENST00000474272 URB1O60287 2271 aaKnown RBP1.54□□□□□ -2.16
TMEM50B-208ENST00000474272 CACNA1BQ00975 2339 aa1.54□□□□□ -2.16
TMEM50B-208ENST00000474272 TRAV23DV6A0A075B6W5 121 aa1.54□□□□□ -2.16
TMEM50B-208ENST00000474272 C3orf84H3BNL1 204 aa1.54□□□□□ -2.16
TMEM50B-208ENST00000474272 H7BZZ5 65 aa1.54□□□□□ -2.16
TMEM50B-208ENST00000474272 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.54□□□□□ -2.16
TMEM50B-208ENST00000474272 LINC00575Q6W349 94 aa1.54□□□□□ -2.16
TMEM50B-208ENST00000474272 LINC00269Q8N2A0 174 aa1.54□□□□□ -2.16
TMEM50B-208ENST00000474272 SPTSSBQ8NFR3 76 aa1.54□□□□□ -2.16
TMEM50B-208ENST00000474272 LINC00588Q9Y4M8 146 aa1.54□□□□□ -2.16
TMEM50B-208ENST00000474272 SMG1Q96Q15 3661 aaKnown RBP1.54□□□□□ -2.16
TMEM50B-208ENST00000474272 BSNQ9UPA5 3926 aa1.53□□□□□ -2.16
TMEM50B-208ENST00000474272 hDV103S1A0JD37 113 aa1.53□□□□□ -2.16
TMEM50B-208ENST00000474272 A6NED7 52 aa1.53□□□□□ -2.16
TMEM50B-208ENST00000474272 H3BNG1 76 aa1.53□□□□□ -2.16
TMEM50B-208ENST00000474272 LECT2O14960 151 aa1.53□□□□□ -2.16
TMEM50B-208ENST00000474272 KALRNO60229 2985 aa1.53□□□□□ -2.16
TMEM50B-208ENST00000474272 ROS1P08922 2347 aa1.53□□□□□ -2.16
TMEM50B-208ENST00000474272 MIFP14174 115 aa1.53□□□□□ -2.16
TMEM50B-208ENST00000474272 DEFB136Q30KP8 78 aa1.53□□□□□ -2.16
TMEM50B-208ENST00000474272 Q6ZQT0 140 aa1.53□□□□□ -2.16
TMEM50B-208ENST00000474272 Q8NAQ8 132 aa1.53□□□□□ -2.16
TMEM50B-208ENST00000474272 SPENQ96T58 3664 aaKnown RBP1.53□□□□□ -2.16
TMEM50B-208ENST00000474272 RETNLBQ9BQ08 111 aa1.53□□□□□ -2.16
TMEM50B-208ENST00000474272 C14orf132Q9NPU4 83 aa1.53□□□□□ -2.16
TMEM50B-208ENST00000474272 TOMM7Q9P0U1 55 aa1.53□□□□□ -2.16
TMEM50B-208ENST00000474272 WNK2Q9Y3S1 2297 aa1.53□□□□□ -2.16
TMEM50B-208ENST00000474272 CFAP47Q6ZTR5 3102 aa1.53□□□□□ -2.17
TMEM50B-208ENST00000474272 ADGRG4Q8IZF6 3080 aa1.53□□□□□ -2.17
TMEM50B-208ENST00000474272 FCGBPQ9Y6R7 5405 aaPredicted RBP1.53□□□□□ -2.17
TMEM50B-208ENST00000474272 BDP1A6H8Y1 2624 aa1.53□□□□□ -2.17
TMEM50B-208ENST00000474272 ASPMQ8IZT6 3477 aa1.52□□□□□ -2.17
TMEM50B-208ENST00000474272 A0A1B0GU33 70 aa1.52□□□□□ -2.17
TMEM50B-208ENST00000474272 A0A1W2PNM2 257 aa1.52□□□□□ -2.17
TMEM50B-208ENST00000474272 NCR3O14931 201 aa1.52□□□□□ -2.17
TMEM50B-208ENST00000474272 LINC00313P59037 77 aa1.52□□□□□ -2.17
TMEM50B-208ENST00000474272 LELP1Q5T871 98 aa1.52□□□□□ -2.17
TMEM50B-208ENST00000474272 WFDC9Q8NEX5 89 aa1.52□□□□□ -2.17
TMEM50B-208ENST00000474272 B9D2Q9BPU9 175 aa1.52□□□□□ -2.17
TMEM50B-208ENST00000474272 CDC42SE1Q9NRR8 79 aa1.52□□□□□ -2.17
TMEM50B-208ENST00000474272 NCOR1O75376 2440 aa1.51□□□□□ -2.17
TMEM50B-208ENST00000474272 CACNA1HO95180 2353 aa1.51□□□□□ -2.17
TMEM50B-208ENST00000474272 ABCA4P78363 2273 aa1.51□□□□□ -2.17
TMEM50B-208ENST00000474272 PKDREJQ9NTG1 2253 aa1.51□□□□□ -2.17
TMEM50B-208ENST00000474272 DMXL2Q8TDJ6 3036 aa1.51□□□□□ -2.17
TMEM50B-208ENST00000474272 PRRC2CQ9Y520 2896 aaKnown RBP1.51□□□□□ -2.17
TMEM50B-208ENST00000474272 ZNF292O60281 2723 aa1.51□□□□□ -2.17
TMEM50B-208ENST00000474272 IGKV3D-7A0A0C4DH55 119 aa1.51□□□□□ -2.17
TMEM50B-208ENST00000474272 TRBV7-4A0A0J9YYF1 115 aa1.51□□□□□ -2.17
TMEM50B-208ENST00000474272 HCG22E2RYF7 251 aa1.51□□□□□ -2.17
TMEM50B-208ENST00000474272 CHKB-CPT1BH3BT56 60 aa1.51□□□□□ -2.17
TMEM50B-208ENST00000474272 SPART-AS1P0CW21 52 aa1.51□□□□□ -2.17
TMEM50B-208ENST00000474272 C9orf116Q5BN46 136 aaPredicted RBP1.51□□□□□ -2.17
TMEM50B-208ENST00000474272 CUL9Q8IWT3 2517 aa1.51□□□□□ -2.17
TMEM50B-208ENST00000474272 ANKHD1Q8IWZ3 2542 aaKnown RBP1.51□□□□□ -2.17
TMEM50B-208ENST00000474272 EP300Q09472 2414 aaPredicted RBP1.51□□□□□ -2.17
TMEM50B-208ENST00000474272 MGAQ8IWI9 3026 aa1.51□□□□□ -2.17
TMEM50B-208ENST00000474272 CNOT1A5YKK6 2376 aaKnown RBP1.51□□□□□ -2.17
TMEM50B-208ENST00000474272 APC2O95996 2303 aa1.51□□□□□ -2.17
TMEM50B-208ENST00000474272 IGLV5-48A0A075B6I7 105 aa1.5□□□□□ -2.17
TMEM50B-208ENST00000474272 IGKV3OR2-268A0A0C4DH90 116 aa1.5□□□□□ -2.17
TMEM50B-208ENST00000474272 ANGP03950 147 aaKnown RBP1.5□□□□□ -2.17
TMEM50B-208ENST00000474272 DEFB130BP0DP73 79 aa1.5□□□□□ -2.17
TMEM50B-208ENST00000474272 DEFB130AP0DP74 79 aa1.5□□□□□ -2.17
TMEM50B-208ENST00000474272 COX7BP24311 80 aa1.5□□□□□ -2.17
TMEM50B-208ENST00000474272 ELOF1P60002 83 aaKnown RBP1.5□□□□□ -2.17
TMEM50B-208ENST00000474272 ENHOQ6UWT2 76 aa1.5□□□□□ -2.17
TMEM50B-208ENST00000474272 TMEM254Q8TBM7 123 aa1.5□□□□□ -2.17
TMEM50B-208ENST00000474272 LAMA5O15230 3695 aa1.5□□□□□ -2.17
TMEM50B-208ENST00000474272 ZFHX2Q9C0A1 2572 aaPredicted RBP1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms