RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 A0A0C4DFX4 3053 aa-1.07□□□□□ -2.58
ECHDC1-213ENST00000474240 ATOX1O00244 68 aa-1.07□□□□□ -2.58
ECHDC1-213ENST00000474240 SARNPP82979 210 aaKnown RBP-1.07□□□□□ -2.58
ECHDC1-213ENST00000474240 TRGV9Q99603 122 aa-1.07□□□□□ -2.58
ECHDC1-213ENST00000474240 PMCHL2Q9BQD1 86 aa-1.07□□□□□ -2.58
ECHDC1-213ENST00000474240 C2orf88Q9BSF0 95 aa-1.07□□□□□ -2.58
ECHDC1-213ENST00000474240 CICQ96RK0 1608 aaPredicted RBP-1.07□□□□□ -2.58
ECHDC1-213ENST00000474240 ETDBQ3ZM63 59 aa-1.08□□□□□ -2.58
ECHDC1-213ENST00000474240 ANK3Q12955 4377 aaKnown RBP-1.08□□□□□ -2.58
ECHDC1-213ENST00000474240 VPS13DQ5THJ4 4388 aa-1.09□□□□□ -2.58
ECHDC1-213ENST00000474240 SPG11Q96JI7 2443 aa-1.09□□□□□ -2.58
ECHDC1-213ENST00000474240 D6R8Y8 96 aa-1.09□□□□□ -2.58
ECHDC1-213ENST00000474240 MUSTN1Q8IVN3 82 aa-1.09□□□□□ -2.58
ECHDC1-213ENST00000474240 UQCRHLA0A096LP55 91 aa-1.1□□□□□ -2.59
ECHDC1-213ENST00000474240 LEPROTL1O95214 131 aa-1.1□□□□□ -2.59
ECHDC1-213ENST00000474240 NBASA2RRP1 2371 aa-1.1□□□□□ -2.59
ECHDC1-213ENST00000474240 PKD1L3Q7Z443 1732 aa-1.1□□□□□ -2.59
ECHDC1-213ENST00000474240 PRDM15P57071 1507 aaPredicted RBP-1.1□□□□□ -2.59
ECHDC1-213ENST00000474240 CEP295Q9C0D2 2601 aa-1.11□□□□□ -2.59
ECHDC1-213ENST00000474240 H3BNG1 76 aa-1.11□□□□□ -2.59
ECHDC1-213ENST00000474240 H7BZZ5 65 aa-1.11□□□□□ -2.59
ECHDC1-213ENST00000474240 COX6B2Q6YFQ2 88 aa-1.11□□□□□ -2.59
ECHDC1-213ENST00000474240 PREX1Q8TCU6 1659 aa-1.11□□□□□ -2.59
ECHDC1-213ENST00000474240 DMXL2Q8TDJ6 3036 aa-1.12□□□□□ -2.59
ECHDC1-213ENST00000474240 PKD1P98161 4303 aa-1.12□□□□□ -2.59
ECHDC1-213ENST00000474240 TROQ12816 1431 aaPredicted RBP-1.12□□□□□ -2.59
ECHDC1-213ENST00000474240 KNL1Q8NG31 2342 aa-1.12□□□□□ -2.59
ECHDC1-213ENST00000474240 SERP2Q8N6R1 65 aa-1.12□□□□□ -2.59
ECHDC1-213ENST00000474240 SPRR2FQ96RM1 72 aa-1.12□□□□□ -2.59
ECHDC1-213ENST00000474240 LRRK2Q5S007 2527 aa-1.12□□□□□ -2.59
ECHDC1-213ENST00000474240 FYCO1Q9BQS8 1478 aa-1.12□□□□□ -2.59
ECHDC1-213ENST00000474240 MYO15AQ9UKN7 3530 aa-1.12□□□□□ -2.59
ECHDC1-213ENST00000474240 UBR3Q6ZT12 1888 aa-1.13□□□□□ -2.59
ECHDC1-213ENST00000474240 NBEAQ8NFP9 2946 aa-1.13□□□□□ -2.59
ECHDC1-213ENST00000474240 LINC00032P0C843 101 aa-1.13□□□□□ -2.59
ECHDC1-213ENST00000474240 COL5A1-AS1Q5SY13 56 aa-1.13□□□□□ -2.59
ECHDC1-213ENST00000474240 QSER1Q2KHR3 1735 aa-1.13□□□□□ -2.59
ECHDC1-213ENST00000474240 CRYBG1Q9Y4K1 1723 aa-1.13□□□□□ -2.59
ECHDC1-213ENST00000474240 CLTCQ00610 1675 aaKnown RBP-1.13□□□□□ -2.59
ECHDC1-213ENST00000474240 HTTP42858 3142 aa-1.13□□□□□ -2.59
ECHDC1-213ENST00000474240 DYNC1H1Q14204 4646 aaKnown RBP-1.14□□□□□ -2.59
ECHDC1-213ENST00000474240 ANKRD50Q9ULJ7 1429 aa-1.14□□□□□ -2.59
ECHDC1-213ENST00000474240 IGLC2P0DOY2 106 aa-1.14□□□□□ -2.59
ECHDC1-213ENST00000474240 IGLC3P0DOY3 106 aa-1.14□□□□□ -2.59
ECHDC1-213ENST00000474240 LELP1Q5T871 98 aa-1.14□□□□□ -2.59
ECHDC1-213ENST00000474240 LYSTQ99698 3801 aa-1.14□□□□□ -2.59
ECHDC1-213ENST00000474240 LRRC9Q6ZRR7 1453 aa-1.14□□□□□ -2.59
ECHDC1-213ENST00000474240 RGPD8O14715 1765 aaPredicted RBP-1.14□□□□□ -2.59
ECHDC1-213ENST00000474240 RGPD5Q99666 1765 aa-1.14□□□□□ -2.59
ECHDC1-213ENST00000474240 ZFYVE16Q7Z3T8 1539 aa-1.15□□□□□ -2.59
ECHDC1-213ENST00000474240 CFAP46Q8IYW2 2715 aa-1.15□□□□□ -2.59
ECHDC1-213ENST00000474240 C9orf92A6NGG3 77 aa-1.15□□□□□ -2.59
ECHDC1-213ENST00000474240 APOBP04114 4563 aaKnown RBP-1.16□□□□□ -2.59
ECHDC1-213ENST00000474240 ANKRD36BQ8N2N9 1353 aa-1.16□□□□□ -2.59
ECHDC1-213ENST00000474240 EYSQ5T1H1 3165 aa-1.16□□□□□ -2.6
ECHDC1-213ENST00000474240 CHD7Q9P2D1 2997 aa-1.16□□□□□ -2.6
ECHDC1-213ENST00000474240 PKD1L2Q7Z442 2459 aa-1.16□□□□□ -2.6
ECHDC1-213ENST00000474240 MAGI2Q86UL8 1455 aa-1.17□□□□□ -2.6
ECHDC1-213ENST00000474240 COX7BP24311 80 aa-1.17□□□□□ -2.6
ECHDC1-213ENST00000474240 DEFA5Q01523 94 aa-1.17□□□□□ -2.6
ECHDC1-213ENST00000474240 LINC00587B1AMM8 73 aa-1.18□□□□□ -2.6
ECHDC1-213ENST00000474240 F8WEM9 126 aa-1.18□□□□□ -2.6
ECHDC1-213ENST00000474240 MT1AP04731 61 aa-1.18□□□□□ -2.6
ECHDC1-213ENST00000474240 S100A10P60903 97 aa-1.18□□□□□ -2.6
ECHDC1-213ENST00000474240 UBE2D4Q9Y2X8 147 aa-1.18□□□□□ -2.6
ECHDC1-213ENST00000474240 FAUP35544 74 aaKnown RBP-1.19□□□□□ -2.6
ECHDC1-213ENST00000474240 TCEAL7Q9BRU2 100 aa-1.19□□□□□ -2.6
ECHDC1-213ENST00000474240 AKAP9Q99996 3911 aa-1.19□□□□□ -2.6
ECHDC1-213ENST00000474240 PDE4DIPQ5VU43 2346 aa-1.2□□□□□ -2.6
ECHDC1-213ENST00000474240 EPRSP07814 1512 aaKnown RBP-1.2□□□□□ -2.6
ECHDC1-213ENST00000474240 UTP20O75691 2785 aaKnown RBP-1.2□□□□□ -2.6
ECHDC1-213ENST00000474240 ZZEF1O43149 2961 aa-1.2□□□□□ -2.6
ECHDC1-213ENST00000474240 KALRNO60229 2985 aa-1.2□□□□□ -2.6
ECHDC1-213ENST00000474240 SMIM11AP58511 58 aa-1.2□□□□□ -2.6
ECHDC1-213ENST00000474240 SACSQ9NZJ4 4579 aa-1.2□□□□□ -2.6
ECHDC1-213ENST00000474240 CMYA5Q8N3K9 4069 aa-1.2□□□□□ -2.6
ECHDC1-213ENST00000474240 NRXN1Q9ULB1 1477 aa-1.2□□□□□ -2.6
ECHDC1-213ENST00000474240 C4AP0C0L4 1744 aa-1.2□□□□□ -2.6
ECHDC1-213ENST00000474240 C4BP0C0L5 1744 aa-1.2□□□□□ -2.6
ECHDC1-213ENST00000474240 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.21□□□□□ -2.62e-8■■■■□ 24.3
ECHDC1-213ENST00000474240 CYB5AP00167 134 aa-1.21□□□□□ -2.6
ECHDC1-213ENST00000474240 MT1HL1P0DM35 61 aa-1.21□□□□□ -2.6
ECHDC1-213ENST00000474240 TRANK1O15050 2925 aa-1.21□□□□□ -2.6
ECHDC1-213ENST00000474240 LRRC7Q96NW7 1537 aa-1.21□□□□□ -2.6
ECHDC1-213ENST00000474240 VPS13BQ7Z7G8 4022 aa-1.21□□□□□ -2.6
ECHDC1-213ENST00000474240 DNAH1Q9P2D7 4330 aa-1.21□□□□□ -2.6
ECHDC1-213ENST00000474240 REV3LO60673 3130 aa-1.22□□□□□ -2.6
ECHDC1-213ENST00000474240 A0A1B0GUT8 65 aa-1.22□□□□□ -2.6
ECHDC1-213ENST00000474240 MT-ATP8P03928 68 aa-1.22□□□□□ -2.6
ECHDC1-213ENST00000474240 DPY30Q9C005 99 aa-1.22□□□□□ -2.6
ECHDC1-213ENST00000474240 FAM186AA6NE01 2351 aa-1.22□□□□□ -2.61
ECHDC1-213ENST00000474240 ALKQ9UM73 1620 aa-1.22□□□□□ -2.61
ECHDC1-213ENST00000474240 FANCAO15360 1455 aa-1.23□□□□□ -2.61
ECHDC1-213ENST00000474240 TEX14Q8IWB6 1497 aa-1.23□□□□□ -2.61
ECHDC1-213ENST00000474240 ACACAQ13085 2346 aa-1.23□□□□□ -2.61
ECHDC1-213ENST00000474240 NDUFA3O95167 84 aa-1.23□□□□□ -2.61
ECHDC1-213ENST00000474240 PLGLAQ15195 96 aa-1.23□□□□□ -2.61
ECHDC1-213ENST00000474240 GAFA1Q96PS6 74 aa-1.23□□□□□ -2.61
ECHDC1-213ENST00000474240 BOD1L1Q8NFC6 3051 aa-1.23□□□□□ -2.61
ECHDC1-213ENST00000474240 TNRC6CQ9HCJ0 1690 aaKnown RBP-1.23□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms