RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 BCE1O60756 84 aa11.26□□□□□ -0.61
CCDC171-206ENST00000474193 UQCR10Q9UDW1 63 aa11.26□□□□□ -0.61
CCDC171-206ENST00000474193 PRYO14603 147 aa11.25□□□□□ -0.61
CCDC171-206ENST00000474193 PRR26Q8N8Z3 221 aa11.25□□□□□ -0.61
CCDC171-206ENST00000474193 TMEM126AQ9H061 195 aa11.25□□□□□ -0.61
CCDC171-206ENST00000474193 HMCN2Q8NDA2 5059 aa11.24□□□□□ -0.61
CCDC171-206ENST00000474193 TNXBP22105 4242 aa11.24□□□□□ -0.61
CCDC171-206ENST00000474193 RPL13AP40429 203 aaKnown RBP11.24□□□□□ -0.61
CCDC171-206ENST00000474193 UBE2AP49459 152 aa11.23□□□□□ -0.61
CCDC171-206ENST00000474193 KCNQ1DNQ9H478 68 aa11.23□□□□□ -0.61
CCDC171-206ENST00000474193 IGLV6-57P01721 117 aa11.22□□□□□ -0.61
CCDC171-206ENST00000474193 TAL2Q16559 108 aa11.22□□□□□ -0.61
CCDC171-206ENST00000474193 C2orf91Q6ZV80 131 aa11.22□□□□□ -0.61
CCDC171-206ENST00000474193 TRAV13-2A0A0B4J235 113 aa11.21□□□□□ -0.61
CCDC171-206ENST00000474193 A4D1N5 150 aa11.21□□□□□ -0.61
CCDC171-206ENST00000474193 A6NDN8 102 aa11.21□□□□□ -0.61
CCDC171-206ENST00000474193 FAM19A1Q7Z5A9 133 aa11.21□□□□□ -0.61
CCDC171-206ENST00000474193 TRAV23DV6A0A075B6W5 121 aa11.2□□□□□ -0.62
CCDC171-206ENST00000474193 ETDCA0A1B0GVM5 59 aa11.19□□□□□ -0.62
CCDC171-206ENST00000474193 HINT1P49773 126 aaPredicted RBP11.19□□□□□ -0.62
CCDC171-206ENST00000474193 LINC00337Q8N6G1 96 aa11.19□□□□□ -0.62
CCDC171-206ENST00000474193 C12orf57Q99622 126 aa11.18□□□□□ -0.62
CCDC171-206ENST00000474193 PRO1933Q9H354 126 aa11.18□□□□□ -0.62
CCDC171-206ENST00000474193 TMEM238LA0A1B0GVL6 79 aa11.17□□□□□ -0.62
CCDC171-206ENST00000474193 A6NJY4 79 aa11.17□□□□□ -0.62
CCDC171-206ENST00000474193 KRTAP1-4P0C5Y4 121 aa11.17□□□□□ -0.62
CCDC171-206ENST00000474193 CEND1Q8N111 149 aa11.17□□□□□ -0.62
CCDC171-206ENST00000474193 ZNF73O43830 326 aaPredicted RBP11.15□□□□□ -0.62
CCDC171-206ENST00000474193 HSD52Q0P140 79 aa11.15□□□□□ -0.62
CCDC171-206ENST00000474193 TSTD3H0UI37 97 aa11.14□□□□□ -0.63
CCDC171-206ENST00000474193 SPRR1AP35321 89 aa11.14□□□□□ -0.63
CCDC171-206ENST00000474193 PRLHP81277 87 aa11.14□□□□□ -0.63
CCDC171-206ENST00000474193 RAB37Q96AX2 223 aa11.14□□□□□ -0.63
CCDC171-206ENST00000474193 CRYGAP11844 174 aa11.12□□□□□ -0.63
CCDC171-206ENST00000474193 HIGD2AQ9BW72 106 aa11.1□□□□□ -0.63
CCDC171-206ENST00000474193 B5MCH6 92 aa11.09□□□□□ -0.63
CCDC171-206ENST00000474193 KRTAP4-16G5E9R7 235 aaPredicted RBP11.09□□□□□ -0.63
CCDC171-206ENST00000474193 KRTAP13-1Q8IUC0 172 aa11.09□□□□□ -0.63
CCDC171-206ENST00000474193 CFC1BP0CG36 223 aa11.08□□□□□ -0.64
CCDC171-206ENST00000474193 CFC1P0CG37 223 aa11.08□□□□□ -0.64
CCDC171-206ENST00000474193 C6orf99Q4VX62 202 aa11.08□□□□□ -0.64
CCDC171-206ENST00000474193 A0A0B4J2C4 111 aa11.07□□□□□ -0.64
CCDC171-206ENST00000474193 FXYD2P54710 66 aa11.07□□□□□ -0.64
CCDC171-206ENST00000474193 Q6ZRX8 168 aa11.07□□□□□ -0.64
CCDC171-206ENST00000474193 TYMSOSQ8TAI1 123 aa11.07□□□□□ -0.64
CCDC171-206ENST00000474193 COX7BP24311 80 aa11.06□□□□□ -0.64
CCDC171-206ENST00000474193 VAMP3Q15836 100 aa11.06□□□□□ -0.64
CCDC171-206ENST00000474193 SMIM11BQ8TCY0 68 aa11.06□□□□□ -0.64
CCDC171-206ENST00000474193 TRBV7-6A0A0J9YX20 115 aa11.05□□□□□ -0.64
CCDC171-206ENST00000474193 UBR4Q5T4S7 5183 aa11.04□□□□□ -0.64
CCDC171-206ENST00000474193 H7C2G1 150 aa11.04□□□□□ -0.64
CCDC171-206ENST00000474193 CTAG1AP78358 180 aa11.04□□□□□ -0.64
CCDC171-206ENST00000474193 NHP2Q9NX24 153 aaKnown RBP11.04□□□□□ -0.64
CCDC171-206ENST00000474193 A0A1B0GWB2 263 aa11.03□□□□□ -0.64
CCDC171-206ENST00000474193 Q1RN00 199 aa11.03□□□□□ -0.64
CCDC171-206ENST00000474193 FAM229BQ4G0N7 80 aa11.03□□□□□ -0.64
CCDC171-206ENST00000474193 SMCR5Q8TEV8 140 aa11.03□□□□□ -0.64
CCDC171-206ENST00000474193 DHRS4-AS1Q9P1J3 65 aa11.03□□□□□ -0.64
CCDC171-206ENST00000474193 PRO1854Q9UHT4 67 aa11.03□□□□□ -0.64
CCDC171-206ENST00000474193 ZNF706Q9Y5V0 76 aaPredicted RBP11.03□□□□□ -0.64
CCDC171-206ENST00000474193 M0R143 59 aa11.02□□□□□ -0.65
CCDC171-206ENST00000474193 ELOF1P60002 83 aaKnown RBP11.02□□□□□ -0.65
CCDC171-206ENST00000474193 BVES-AS1Q5T3Y7 98 aa11.01□□□□□ -0.65
CCDC171-206ENST00000474193 A0A087X002 238 aa11□□□□□ -0.65
CCDC171-206ENST00000474193 TSPAN13O95857 204 aa11□□□□□ -0.65
CCDC171-206ENST00000474193 PRR4Q16378 134 aa11□□□□□ -0.65
CCDC171-206ENST00000474193 Q9BRP9 147 aa10.99□□□□□ -0.65
CCDC171-206ENST00000474193 ANAPC11Q9NYG5 84 aa10.99□□□□□ -0.65
CCDC171-206ENST00000474193 SLC25A20O43772 301 aa10.98□□□□□ -0.65
CCDC171-206ENST00000474193 LRP2P98164 4655 aa10.96□□□□□ -0.66
CCDC171-206ENST00000474193 SPRR4Q96PI1 79 aa10.95□□□□□ -0.66
CCDC171-206ENST00000474193 K7ERJ3 54 aa10.94□□□□□ -0.66
CCDC171-206ENST00000474193 ERC2-IT1O76042 136 aa10.94□□□□□ -0.66
CCDC171-206ENST00000474193 SNCGO76070 127 aa10.94□□□□□ -0.66
CCDC171-206ENST00000474193 H0YGX0 51 aa10.92□□□□□ -0.66
CCDC171-206ENST00000474193 PSMB2P49721 201 aa10.92□□□□□ -0.66
CCDC171-206ENST00000474193 GAGE2AQ6NT46 116 aa10.92□□□□□ -0.66
CCDC171-206ENST00000474193 LINC00304Q8N9R0 145 aa10.92□□□□□ -0.66
CCDC171-206ENST00000474193 KRTAP13-2Q52LG2 175 aa10.91□□□□□ -0.66
CCDC171-206ENST00000474193 COX6CP09669 75 aa10.9□□□□□ -0.66
CCDC171-206ENST00000474193 BATFQ16520 125 aa10.9□□□□□ -0.66
CCDC171-206ENST00000474193 LINC00575Q6W349 94 aa10.9□□□□□ -0.66
CCDC171-206ENST00000474193 hADV29S1A0JD25 119 aa10.89□□□□□ -0.67
CCDC171-206ENST00000474193 C4orf48Q5BLP8 95 aa10.87□□□□□ -0.67
CCDC171-206ENST00000474193 ST20-AS1Q8NBB2 130 aa10.87□□□□□ -0.67
CCDC171-206ENST00000474193 LINC00483Q53H64 154 aa10.86□□□□□ -0.67
CCDC171-206ENST00000474193 DEFB105AQ8NG35 78 aa10.86□□□□□ -0.67
CCDC171-206ENST00000474193 TRIAP1O43715 76 aa10.85□□□□□ -0.67
CCDC171-206ENST00000474193 SPAG11AQ6PDA7 123 aa10.85□□□□□ -0.67
CCDC171-206ENST00000474193 SCGB1C2P0DMR2 95 aa10.84□□□□□ -0.67
CCDC171-206ENST00000474193 TEX49A0A1B0GTD5 131 aa10.83□□□□□ -0.68
CCDC171-206ENST00000474193 C3orf22Q8N5N4 141 aa10.83□□□□□ -0.68
CCDC171-206ENST00000474193 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.81□□□□□ -0.68
CCDC171-206ENST00000474193 Q6ZQY7 126 aa10.81□□□□□ -0.68
CCDC171-206ENST00000474193 LAMTOR3Q9UHA4 124 aa10.81□□□□□ -0.68
CCDC171-206ENST00000474193 A0A1B0GX51 115 aa10.8□□□□□ -0.68
CCDC171-206ENST00000474193 IGLV9-49A0A0B4J1Y8 123 aa10.79□□□□□ -0.68
CCDC171-206ENST00000474193 SPRR1BP22528 89 aa10.79□□□□□ -0.68
CCDC171-206ENST00000474193 PCP4L1A6NKN8 68 aa10.78□□□□□ -0.68
CCDC171-206ENST00000474193 GHRHP01286 108 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms