RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 LINC00959A0A1B0GUT2 108 aa1.99□□□□□ -2.09
BRCA1-212ENST00000473961 C19orf84I3L1E1 186 aa1.99□□□□□ -2.09
BRCA1-212ENST00000473961 HTN1P15515 57 aa1.99□□□□□ -2.09
BRCA1-212ENST00000473961 LYNX1G3V0Z9 82 aa1.98□□□□□ -2.09
BRCA1-212ENST00000473961 PRB1P04280 392 aa1.98□□□□□ -2.09
BRCA1-212ENST00000473961 LYNX1P0DP58 116 aa1.98□□□□□ -2.09
BRCA1-212ENST00000473961 CNBPP62633 177 aaKnown RBP1.98□□□□□ -2.09
BRCA1-212ENST00000473961 PLAC8Q9NZF1 115 aa1.98□□□□□ -2.09
BRCA1-212ENST00000473961 PRO2289Q9P1D8 64 aa1.98□□□□□ -2.09
BRCA1-212ENST00000473961 PTPRQQ9UMZ3 2332 aa1.97□□□□□ -2.09
BRCA1-212ENST00000473961 KIAA0100Q14667 2235 aaKnown RBP1.97□□□□□ -2.09
BRCA1-212ENST00000473961 IGLV5-48A0A075B6I7 105 aa1.97□□□□□ -2.09
BRCA1-212ENST00000473961 SPAG11BQ08648 103 aa1.97□□□□□ -2.09
BRCA1-212ENST00000473961 CACNA1EQ15878 2313 aa1.96□□□□□ -2.1
BRCA1-212ENST00000473961 PLCE1Q9P212 2302 aa1.96□□□□□ -2.1
BRCA1-212ENST00000473961 WDR87Q6ZQQ6 2873 aa1.96□□□□□ -2.1
BRCA1-212ENST00000473961 TRGV1A0A0A0MS02 117 aa1.96□□□□□ -2.1
BRCA1-212ENST00000473961 IGKV3OR2-268A0A0C4DH90 116 aa1.96□□□□□ -2.1
BRCA1-212ENST00000473961 DEFB131AP59861 70 aa1.96□□□□□ -2.1
BRCA1-212ENST00000473961 COA5Q86WW8 74 aa1.96□□□□□ -2.1
BRCA1-212ENST00000473961 C9orf163Q8N9P6 203 aa1.96□□□□□ -2.1
BRCA1-212ENST00000473961 RETNLBQ9BQ08 111 aa1.96□□□□□ -2.1
BRCA1-212ENST00000473961 URB1O60287 2271 aaKnown RBP1.96□□□□□ -2.1
BRCA1-212ENST00000473961 ABCA4P78363 2273 aa1.96□□□□□ -2.1
BRCA1-212ENST00000473961 WNK2Q9Y3S1 2297 aa1.95□□□□□ -2.1
BRCA1-212ENST00000473961 GVQW2A0A096LPI5 108 aaPredicted RBP1.95□□□□□ -2.1
BRCA1-212ENST00000473961 H0Y9P7 68 aa1.95□□□□□ -2.1
BRCA1-212ENST00000473961 SPRR4Q96PI1 79 aa1.95□□□□□ -2.1
BRCA1-212ENST00000473961 EP400Q96L91 3159 aa1.95□□□□□ -2.1
BRCA1-212ENST00000473961 ICE1Q9Y2F5 2266 aa1.94□□□□□ -2.1
BRCA1-212ENST00000473961 FAM186AA6NE01 2351 aa1.94□□□□□ -2.1
BRCA1-212ENST00000473961 A0A0G2JQZ4 141 aa1.94□□□□□ -2.1
BRCA1-212ENST00000473961 SPINK7P58062 85 aa1.94□□□□□ -2.1
BRCA1-212ENST00000473961 DEFB112Q30KQ8 113 aa1.94□□□□□ -2.1
BRCA1-212ENST00000473961 Q8NDZ9 215 aa1.94□□□□□ -2.1
BRCA1-212ENST00000473961 AHCTF1Q8WYP5 2266 aa1.94□□□□□ -2.1
BRCA1-212ENST00000473961 K7EQZ3 153 aa1.93□□□□□ -2.1
BRCA1-212ENST00000473961 C1orf137Q5JT78 98 aa1.93□□□□□ -2.1
BRCA1-212ENST00000473961 SPAG11AQ6PDA7 123 aa1.93□□□□□ -2.1
BRCA1-212ENST00000473961 CEP350Q5VT06 3117 aa1.93□□□□□ -2.1
BRCA1-212ENST00000473961 SORL1Q92673 2214 aa1.93□□□□□ -2.1
BRCA1-212ENST00000473961 DOPEY2Q9Y3R5 2298 aa1.92□□□□□ -2.1
BRCA1-212ENST00000473961 IGLV1-51P01701 117 aa1.92□□□□□ -2.1
BRCA1-212ENST00000473961 DEFB109BQ30KR1 87 aa1.92□□□□□ -2.1
BRCA1-212ENST00000473961 SPATA8Q6RVD6 105 aa1.92□□□□□ -2.1
BRCA1-212ENST00000473961 UNQ6190/PRO20217Q6UXQ8 127 aa1.92□□□□□ -2.1
BRCA1-212ENST00000473961 NOP10Q9NPE3 64 aaKnown RBP1.92□□□□□ -2.1
BRCA1-212ENST00000473961 MED13LQ71F56 2210 aa1.92□□□□□ -2.1
BRCA1-212ENST00000473961 COL6A3P12111 3177 aa1.91□□□□□ -2.1
BRCA1-212ENST00000473961 DEFB131BA0A096LNP1 70 aa1.91□□□□□ -2.1
BRCA1-212ENST00000473961 H3BUX3 64 aa1.91□□□□□ -2.1
BRCA1-212ENST00000473961 KRTAP21-2Q3LI59 83 aa1.91□□□□□ -2.1
BRCA1-212ENST00000473961 WFDC13Q8IUB5 93 aa1.91□□□□□ -2.1
BRCA1-212ENST00000473961 TP53AIP1Q9HCN2 124 aa1.91□□□□□ -2.1
BRCA1-212ENST00000473961 UTRNP46939 3433 aa1.91□□□□□ -2.1
BRCA1-212ENST00000473961 TECTAO75443 2155 aa1.91□□□□□ -2.1
BRCA1-212ENST00000473961 ZFHX3Q15911 3703 aa1.9□□□□□ -2.1
BRCA1-212ENST00000473961 HMCN1Q96RW7 5635 aa1.9□□□□□ -2.1
BRCA1-212ENST00000473961 B4DSR2 109 aa1.9□□□□□ -2.11
BRCA1-212ENST00000473961 C1orf134Q5TEV5 83 aa1.9□□□□□ -2.11
BRCA1-212ENST00000473961 WFDC10BQ8IUB3 73 aa1.9□□□□□ -2.11
BRCA1-212ENST00000473961 DEFB105AQ8NG35 78 aa1.9□□□□□ -2.11
BRCA1-212ENST00000473961 SZT2Q5T011 3432 aa1.89□□□□□ -2.11
BRCA1-212ENST00000473961 ANGP03950 147 aaKnown RBP1.89□□□□□ -2.11
BRCA1-212ENST00000473961 CSAG1Q6PB30 78 aa1.89□□□□□ -2.11
BRCA1-212ENST00000473961 C6orf48Q9UBA6 75 aa1.89□□□□□ -2.11
BRCA1-212ENST00000473961 UNC80Q8N2C7 3258 aa1.89□□□□□ -2.11
BRCA1-212ENST00000473961 SDK1Q7Z5N4 2213 aa1.89□□□□□ -2.11
BRCA1-212ENST00000473961 CR1P17927 2039 aa1.88□□□□□ -2.11
BRCA1-212ENST00000473961 UQCR11O14957 56 aa1.88□□□□□ -2.11
BRCA1-212ENST00000473961 ROMO1P60602 79 aa1.88□□□□□ -2.11
BRCA1-212ENST00000473961 MIR22HGQ0VDD5 57 aa1.88□□□□□ -2.11
BRCA1-212ENST00000473961 CLPSL2Q6UWE3 100 aa1.88□□□□□ -2.11
BRCA1-212ENST00000473961 PRO0255Q9UI72 69 aa1.88□□□□□ -2.11
BRCA1-212ENST00000473961 SPTBN1Q01082 2364 aaKnown RBP1.88□□□□□ -2.11
BRCA1-212ENST00000473961 CEP250Q9BV73 2442 aa1.88□□□□□ -2.11
BRCA1-212ENST00000473961 ACYP2P14621 99 aa1.87□□□□□ -2.11
BRCA1-212ENST00000473961 RANBP2P49792 3224 aaKnown RBP1.87□□□□□ -2.11
BRCA1-212ENST00000473961 Q6ZRX8 168 aa1.87□□□□□ -2.11
BRCA1-212ENST00000473961 SPTBN2O15020 2390 aa1.86□□□□□ -2.11
BRCA1-212ENST00000473961 DNAH14Q0VDD8 3507 aa1.86□□□□□ -2.11
BRCA1-212ENST00000473961 PKDREJQ9NTG1 2253 aa1.86□□□□□ -2.11
BRCA1-212ENST00000473961 A0A1B0GU69 56 aa1.86□□□□□ -2.11
BRCA1-212ENST00000473961 SPRR1AP35321 89 aa1.86□□□□□ -2.11
BRCA1-212ENST00000473961 TPRXLQ17RH7 258 aa1.86□□□□□ -2.11
BRCA1-212ENST00000473961 PCOTHQ58A44 107 aa1.86□□□□□ -2.11
BRCA1-212ENST00000473961 C10orf99Q6UWK7 81 aa1.86□□□□□ -2.11
BRCA1-212ENST00000473961 C4orf3Q8WVX3 66 aa1.86□□□□□ -2.11
BRCA1-212ENST00000473961 PRO3102Q9H379 93 aa1.86□□□□□ -2.11
BRCA1-212ENST00000473961 ZZEF1O43149 2961 aa1.86□□□□□ -2.11
BRCA1-212ENST00000473961 CACNA1BQ00975 2339 aa1.85□□□□□ -2.11
BRCA1-212ENST00000473961 NBEAQ8NFP9 2946 aa1.85□□□□□ -2.11
BRCA1-212ENST00000473961 A0A087WSZ3 146 aa1.85□□□□□ -2.11
BRCA1-212ENST00000473961 MMP24-AS1A0A0U1RRL7 71 aa1.85□□□□□ -2.11
BRCA1-212ENST00000473961 DEFB130BP0DP73 79 aa1.85□□□□□ -2.11
BRCA1-212ENST00000473961 DEFB130AP0DP74 79 aa1.85□□□□□ -2.11
BRCA1-212ENST00000473961 RPL37AP61513 92 aaKnown RBP1.85□□□□□ -2.11
BRCA1-212ENST00000473961 LELP1Q5T871 98 aa1.85□□□□□ -2.11
BRCA1-212ENST00000473961 LINC00472Q9H8W2 130 aa1.85□□□□□ -2.11
BRCA1-212ENST00000473961 ROS1P08922 2347 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms