RNA–Protein interactions for RNA: ENST00000473608.1

RAB5A-207, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5A, Length 868 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-207ENST00000473608 KRTAP19-8Q3LI54 63 aa-0.34□□□□□ -2.46
RAB5A-207ENST00000473608 KMT2CQ8NEZ4 4911 aaKnown RBP-0.34□□□□□ -2.46
RAB5A-207ENST00000473608 PRRC2CQ9Y520 2896 aaKnown RBP-0.35□□□□□ -2.46
RAB5A-207ENST00000473608 CLIP1P30622 1438 aa-0.35□□□□□ -2.47
RAB5A-207ENST00000473608 COX7BP24311 80 aa-0.35□□□□□ -2.47
RAB5A-207ENST00000473608 PLGLAQ15195 96 aa-0.35□□□□□ -2.47
RAB5A-207ENST00000473608 AKAP13Q12802 2813 aa-0.35□□□□□ -2.47
RAB5A-207ENST00000473608 PDE4DIPQ5VU43 2346 aa-0.36□□□□□ -2.47
RAB5A-207ENST00000473608 RGPD3A6NKT7 1758 aaPredicted RBP-0.36□□□□□ -2.47
RAB5A-207ENST00000473608 RGPD2P0DJD1 1756 aa-0.36□□□□□ -2.47
RAB5A-207ENST00000473608 HECTD1Q9ULT8 2610 aa-0.36□□□□□ -2.47
RAB5A-207ENST00000473608 A0A1B0GUT8 65 aa-0.36□□□□□ -2.47
RAB5A-207ENST00000473608 FLGP20930 4061 aaPredicted RBP-0.36□□□□□ -2.47
RAB5A-207ENST00000473608 ATP7BP35670 1465 aa-0.36□□□□□ -2.47
RAB5A-207ENST00000473608 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.36□□□□□ -2.47
RAB5A-207ENST00000473608 RGPD1P0DJD0 1748 aa-0.37□□□□□ -2.47
RAB5A-207ENST00000473608 PVALEFA0A1B0GWK0 134 aa-0.37□□□□□ -2.47
RAB5A-207ENST00000473608 HEPN1Q6WQI6 88 aa-0.37□□□□□ -2.47
RAB5A-207ENST00000473608 S100A16Q96FQ6 103 aaKnown RBP-0.37□□□□□ -2.47
RAB5A-207ENST00000473608 PLIN4Q96Q06 1357 aa-0.37□□□□□ -2.47
RAB5A-207ENST00000473608 MYO18BQ8IUG5 2567 aa-0.38□□□□□ -2.47
RAB5A-207ENST00000473608 QSER1Q2KHR3 1735 aa-0.38□□□□□ -2.47
RAB5A-207ENST00000473608 CDKN2A-AS1Q9UH64 79 aa-0.38□□□□□ -2.47
RAB5A-207ENST00000473608 BCORQ6W2J9 1755 aa-0.38□□□□□ -2.47
RAB5A-207ENST00000473608 UBR3Q6ZT12 1888 aa-0.38□□□□□ -2.47
RAB5A-207ENST00000473608 USP9XQ93008 2570 aaPredicted RBP-0.38□□□□□ -2.47
RAB5A-207ENST00000473608 SPG11Q96JI7 2443 aa-0.38□□□□□ -2.47
RAB5A-207ENST00000473608 SVEP1Q4LDE5 3571 aa-0.39□□□□□ -2.47
RAB5A-207ENST00000473608 PKD1P98161 4303 aa-0.39□□□□□ -2.47
RAB5A-207ENST00000473608 MYMXA0A1B0GTQ4 84 aa-0.39□□□□□ -2.47
RAB5A-207ENST00000473608 DEFB135Q30KP9 77 aa-0.39□□□□□ -2.47
RAB5A-207ENST00000473608 C9orf62Q8N4C0 152 aa-0.39□□□□□ -2.47
RAB5A-207ENST00000473608 LRRC7Q96NW7 1537 aa-0.39□□□□□ -2.47
RAB5A-207ENST00000473608 TEP1Q99973 2627 aaKnown RBP-0.4□□□□□ -2.47
RAB5A-207ENST00000473608 CYB5AP00167 134 aa-0.4□□□□□ -2.47
RAB5A-207ENST00000473608 KRTAP20-2Q3LI61 65 aa-0.4□□□□□ -2.47
RAB5A-207ENST00000473608 RYR3Q15413 4870 aa-0.4□□□□□ -2.47
RAB5A-207ENST00000473608 ABCC3O15438 1527 aa-0.4□□□□□ -2.47
RAB5A-207ENST00000473608 MT4P47944 62 aa-0.41□□□□□ -2.48
RAB5A-207ENST00000473608 SNRPFP62306 86 aaKnown RBP-0.41□□□□□ -2.48
RAB5A-207ENST00000473608 WFDC13Q8IUB5 93 aa-0.41□□□□□ -2.48
RAB5A-207ENST00000473608 GAFA1Q96PS6 74 aa-0.41□□□□□ -2.48
RAB5A-207ENST00000473608 LAMA5O15230 3695 aa-0.42□□□□□ -2.48
RAB5A-207ENST00000473608 TNRC18O15417 2968 aaPredicted RBP-0.42□□□□□ -2.48
RAB5A-207ENST00000473608 SPTBN4Q9H254 2564 aa-0.42□□□□□ -2.48
RAB5A-207ENST00000473608 ZZEF1O43149 2961 aa-0.42□□□□□ -2.48
RAB5A-207ENST00000473608 TACC2O95359 2948 aa-0.43□□□□□ -2.48
RAB5A-207ENST00000473608 SPRR2AP35326 72 aa-0.43□□□□□ -2.48
RAB5A-207ENST00000473608 TDRG1Q3Y452 100 aa-0.43□□□□□ -2.48
RAB5A-207ENST00000473608 LINC00643Q86TS7 51 aa-0.43□□□□□ -2.48
RAB5A-207ENST00000473608 TMEM131LA2VDJ0 1609 aa-0.44□□□□□ -2.48
RAB5A-207ENST00000473608 TRAV21A0A0B4J279 112 aa-0.44□□□□□ -2.48
RAB5A-207ENST00000473608 HERC1Q15751 4861 aa-0.44□□□□□ -2.48
RAB5A-207ENST00000473608 RIF1Q5UIP0 2472 aaKnown RBP-0.44□□□□□ -2.48
RAB5A-207ENST00000473608 PREX1Q8TCU6 1659 aa-0.45□□□□□ -2.48
RAB5A-207ENST00000473608 RABAC1Q9UI14 185 aa-0.45□□□□□ -2.48
RAB5A-207ENST00000473608 NIPBLQ6KC79 2804 aaeCLIP-0.46□□□□□ -2.48
RAB5A-207ENST00000473608 LRRC9Q6ZRR7 1453 aa-0.46□□□□□ -2.48
RAB5A-207ENST00000473608 RGPD8O14715 1765 aaPredicted RBP-0.46□□□□□ -2.48
RAB5A-207ENST00000473608 RGPD5Q99666 1765 aa-0.46□□□□□ -2.48
RAB5A-207ENST00000473608 HERC2O95714 4834 aa-0.46□□□□□ -2.48
RAB5A-207ENST00000473608 KRTAP6-2Q3LI66 62 aa-0.46□□□□□ -2.48
RAB5A-207ENST00000473608 SONP18583 2426 aaKnown RBP-0.46□□□□□ -2.48
RAB5A-207ENST00000473608 PTPN23Q9H3S7 1636 aa-0.46□□□□□ -2.48
RAB5A-207ENST00000473608 HTTP42858 3142 aa-0.47□□□□□ -2.48
RAB5A-207ENST00000473608 DSPP15924 2871 aaKnown RBP-0.47□□□□□ -2.48
RAB5A-207ENST00000473608 FAT1Q14517 4588 aa-0.47□□□□□ -2.48
RAB5A-207ENST00000473608 CEBPZOSA8MTT3 80 aa-0.47□□□□□ -2.48
RAB5A-207ENST00000473608 GNG2P59768 71 aa-0.47□□□□□ -2.48
RAB5A-207ENST00000473608 COX6B2Q6YFQ2 88 aa-0.47□□□□□ -2.48
RAB5A-207ENST00000473608 ACACAQ13085 2346 aa-0.47□□□□□ -2.48
RAB5A-207ENST00000473608 RYR1P21817 5038 aa-0.47□□□□□ -2.48
RAB5A-207ENST00000473608 SUPT6HQ7KZ85 1726 aaKnown RBP-0.47□□□□□ -2.49
RAB5A-207ENST00000473608 NBPF19A0A087WUL8 3843 aa-0.48□□□□□ -2.49
RAB5A-207ENST00000473608 ADAMTS12P58397 1594 aa-0.48□□□□□ -2.49
RAB5A-207ENST00000473608 USP32Q8NFA0 1604 aa-0.48□□□□□ -2.49
RAB5A-207ENST00000473608 RPL38P63173 70 aaKnown RBP-0.48□□□□□ -2.49
RAB5A-207ENST00000473608 LYSTQ99698 3801 aa-0.48□□□□□ -2.49
RAB5A-207ENST00000473608 PPLO60437 1756 aa-0.48□□□□□ -2.49
RAB5A-207ENST00000473608 DNAH6Q9C0G6 4158 aa-0.49□□□□□ -2.49
RAB5A-207ENST00000473608 KIF14Q15058 1648 aa-0.49□□□□□ -2.49
RAB5A-207ENST00000473608 NDUFA3O95167 84 aa-0.49□□□□□ -2.49
RAB5A-207ENST00000473608 ACYP1P07311 99 aa-0.49□□□□□ -2.49
RAB5A-207ENST00000473608 TEX15Q9BXT5 2789 aa-0.49□□□□□ -2.49
RAB5A-207ENST00000473608 CICQ96RK0 1608 aaPredicted RBP-0.49□□□□□ -2.49
RAB5A-207ENST00000473608 DNAH9Q9NYC9 4486 aa-0.5□□□□□ -2.49
RAB5A-207ENST00000473608 PKD1L2Q7Z442 2459 aa-0.5□□□□□ -2.49
RAB5A-207ENST00000473608 SPRR2EP22531 72 aa-0.5□□□□□ -2.49
RAB5A-207ENST00000473608 WFDC9Q8NEX5 89 aa-0.5□□□□□ -2.49
RAB5A-207ENST00000473608 TIAM2Q8IVF5 1701 aa-0.5□□□□□ -2.49
RAB5A-207ENST00000473608 USH2AO75445 5202 aa-0.5□□□□□ -2.49
RAB5A-207ENST00000473608 CEP290O15078 2479 aa-0.5□□□□□ -2.49
RAB5A-207ENST00000473608 LAMA2P24043 3122 aaKnown RBP-0.51□□□□□ -2.49
RAB5A-207ENST00000473608 AKAP9Q99996 3911 aa-0.51□□□□□ -2.49
RAB5A-207ENST00000473608 H0YGG7 62 aa-0.51□□□□□ -2.49
RAB5A-207ENST00000473608 POLR1AO95602 1720 aaPredicted RBP-0.51□□□□□ -2.49
RAB5A-207ENST00000473608 ZNF831Q5JPB2 1677 aa-0.51□□□□□ -2.49
RAB5A-207ENST00000473608 ANKRD11Q6UB99 2663 aaPredicted RBP-0.51□□□□□ -2.49
RAB5A-207ENST00000473608 HYDINQ4G0P3 5121 aa-0.52□□□□□ -2.49
RAB5A-207ENST00000473608 SMARCA2P51531 1590 aa-0.52□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 154.6 ms