RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 OR2T2Q6IF00 324 aa-0.56□□□□□ -2.5
CLK1-209ENST00000472679 TAC4Q86UU9 113 aa-0.56□□□□□ -2.5
CLK1-209ENST00000472679 WFDC13Q8IUB5 93 aa-0.56□□□□□ -2.5
CLK1-209ENST00000472679 OR8I2Q8N0Y5 310 aa-0.56□□□□□ -2.5
CLK1-209ENST00000472679 MYOZ3Q8TDC0 251 aa-0.56□□□□□ -2.5
CLK1-209ENST00000472679 VPS25Q9BRG1 176 aa-0.56□□□□□ -2.5
CLK1-209ENST00000472679 MYH6P13533 1939 aa-0.57□□□□□ -2.5
CLK1-209ENST00000472679 TCRBV3S1A0A5B6 114 aa-0.57□□□□□ -2.5
CLK1-209ENST00000472679 ATP6V1G2-DDX39BF2Z307 99 aa-0.57□□□□□ -2.5
CLK1-209ENST00000472679 SPINK4O60575 86 aa-0.57□□□□□ -2.5
CLK1-209ENST00000472679 MT-ATP8P03928 68 aa-0.57□□□□□ -2.5
CLK1-209ENST00000472679 PAEPP09466 180 aa-0.57□□□□□ -2.5
CLK1-209ENST00000472679 NEFHP12036 1026 aa-0.57□□□□□ -2.5
CLK1-209ENST00000472679 CCL8P80075 99 aa-0.57□□□□□ -2.5
CLK1-209ENST00000472679 C9orf116Q5BN46 136 aaPredicted RBP-0.57□□□□□ -2.5
CLK1-209ENST00000472679 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.57□□□□□ -2.5
CLK1-209ENST00000472679 TP53AIP1Q9HCN2 124 aa-0.57□□□□□ -2.5
CLK1-209ENST00000472679 MYH9P35579 1960 aaKnown RBP-0.57□□□□□ -2.5
CLK1-209ENST00000472679 TRAV1-2A0A0B4J238 106 aa-0.58□□□□□ -2.5
CLK1-209ENST00000472679 TNP1P09430 55 aa-0.58□□□□□ -2.5
CLK1-209ENST00000472679 SLC25A6P12236 298 aa-0.58□□□□□ -2.5
CLK1-209ENST00000472679 PSMG3Q9BT73 122 aaPredicted RBP-0.58□□□□□ -2.5
CLK1-209ENST00000472679 CALML5Q9NZT1 146 aa-0.58□□□□□ -2.5
CLK1-209ENST00000472679 ANKRD36A6QL64 1941 aa-0.59□□□□□ -2.5
CLK1-209ENST00000472679 MYH4Q9Y623 1939 aa-0.59□□□□□ -2.5
CLK1-209ENST00000472679 BCE1O60756 84 aa-0.59□□□□□ -2.5
CLK1-209ENST00000472679 NMBP08949 121 aa-0.59□□□□□ -2.5
CLK1-209ENST00000472679 RPS28P62857 69 aaKnown RBP-0.59□□□□□ -2.5
CLK1-209ENST00000472679 Q0VG73 95 aa-0.59□□□□□ -2.5
CLK1-209ENST00000472679 C5orf38Q86SI9 138 aa-0.59□□□□□ -2.5
CLK1-209ENST00000472679 SNX29P2Q8IUI4 249 aa-0.59□□□□□ -2.5
CLK1-209ENST00000472679 CNFNQ9BYD5 112 aa-0.59□□□□□ -2.5
CLK1-209ENST00000472679 BANF2Q9H503 90 aa-0.59□□□□□ -2.5
CLK1-209ENST00000472679 LINC00472Q9H8W2 130 aa-0.59□□□□□ -2.5
CLK1-209ENST00000472679 H0YGG7 62 aa-0.6□□□□□ -2.51
CLK1-209ENST00000472679 CFDP00746 253 aaPredicted RBP-0.6□□□□□ -2.51
CLK1-209ENST00000472679 TMEM244Q5VVB8 128 aa-0.6□□□□□ -2.51
CLK1-209ENST00000472679 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.6□□□□□ -2.51
CLK1-209ENST00000472679 C20orf197Q8N268 126 aa-0.6□□□□□ -2.51
CLK1-209ENST00000472679 IFI27L1Q96BM0 104 aa-0.6□□□□□ -2.51
CLK1-209ENST00000472679 RHPN1-AS1Q9BWJ2 59 aa-0.6□□□□□ -2.51
CLK1-209ENST00000472679 M0R1W7 72 aa-0.61□□□□□ -2.51
CLK1-209ENST00000472679 MMGT1Q8N4V1 131 aa-0.61□□□□□ -2.51
CLK1-209ENST00000472679 SPRR4Q96PI1 79 aa-0.61□□□□□ -2.51
CLK1-209ENST00000472679 PRO0255Q9UI72 69 aa-0.61□□□□□ -2.51
CLK1-209ENST00000472679 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.61□□□□□ -2.51
CLK1-209ENST00000472679 HILPDAQ9Y5L2 63 aa-0.61□□□□□ -2.51
CLK1-209ENST00000472679 PPLO60437 1756 aa-0.61□□□□□ -2.51
CLK1-209ENST00000472679 TRAV36DV7A0A075B6V5 113 aa-0.62□□□□□ -2.51
CLK1-209ENST00000472679 MMP24-AS1A0A0U1RRL7 71 aa-0.62□□□□□ -2.51
CLK1-209ENST00000472679 RBAKDNA6NC62 111 aa-0.62□□□□□ -2.51
CLK1-209ENST00000472679 NDUFA2O43678 99 aa-0.62□□□□□ -2.51
CLK1-209ENST00000472679 HLA-DRB4P13762 266 aa-0.62□□□□□ -2.51
CLK1-209ENST00000472679 S100A5P33763 92 aa-0.62□□□□□ -2.51
CLK1-209ENST00000472679 TPPP2P59282 170 aa-0.62□□□□□ -2.51
CLK1-209ENST00000472679 DEFB131AP59861 70 aa-0.62□□□□□ -2.51
CLK1-209ENST00000472679 OR8B8Q15620 311 aa-0.62□□□□□ -2.51
CLK1-209ENST00000472679 MINOS1Q5TGZ0 78 aa-0.62□□□□□ -2.51
CLK1-209ENST00000472679 ENHOQ6UWT2 76 aa-0.62□□□□□ -2.51
CLK1-209ENST00000472679 CYP2G1PQ6ZSU1 146 aa-0.62□□□□□ -2.51
CLK1-209ENST00000472679 SMIM11BQ8TCY0 68 aa-0.62□□□□□ -2.51
CLK1-209ENST00000472679 SKA2Q8WVK7 121 aaPredicted RBP-0.62□□□□□ -2.51
CLK1-209ENST00000472679 AMELXQ99217 191 aa-0.62□□□□□ -2.51
CLK1-209ENST00000472679 SDF2Q99470 211 aa-0.62□□□□□ -2.51
CLK1-209ENST00000472679 NOP10Q9NPE3 64 aaKnown RBP-0.62□□□□□ -2.51
CLK1-209ENST00000472679 TMEM242Q9NWH2 141 aa-0.62□□□□□ -2.51
CLK1-209ENST00000472679 NOP16Q9Y3C1 178 aaKnown RBP-0.62□□□□□ -2.51
CLK1-209ENST00000472679 HLA-DRB4X5D2U9 266 aa-0.62□□□□□ -2.51
CLK1-209ENST00000472679 G3V318 75 aa-0.63□□□□□ -2.51
CLK1-209ENST00000472679 B2MP61769 119 aa-0.63□□□□□ -2.51
CLK1-209ENST00000472679 C9orf153Q5TBE3 101 aa-0.63□□□□□ -2.51
CLK1-209ENST00000472679 SMIM15Q7Z3B0 74 aa-0.63□□□□□ -2.51
CLK1-209ENST00000472679 WFDC6Q9BQY6 131 aa-0.63□□□□□ -2.51
CLK1-209ENST00000472679 KTN1Q86UP2 1357 aaKnown RBP-0.64□□□□□ -2.51
CLK1-209ENST00000472679 I3L2K1 104 aa-0.64□□□□□ -2.51
CLK1-209ENST00000472679 SMIM24O75264 130 aa-0.64□□□□□ -2.51
CLK1-209ENST00000472679 COX4I1P13073 169 aa-0.64□□□□□ -2.51
CLK1-209ENST00000472679 CCL3L1P16619 93 aa-0.64□□□□□ -2.51
CLK1-209ENST00000472679 SPRR1AP35321 89 aa-0.64□□□□□ -2.51
CLK1-209ENST00000472679 NPC2P61916 151 aa-0.64□□□□□ -2.51
CLK1-209ENST00000472679 PP6455Q8WZ26 134 aa-0.64□□□□□ -2.51
CLK1-209ENST00000472679 USMG5Q96IX5 58 aa-0.64□□□□□ -2.51
CLK1-209ENST00000472679 KAAG1Q9UBP8 84 aa-0.64□□□□□ -2.51
CLK1-209ENST00000472679 A0A087WWC5 75 aa-0.65□□□□□ -2.51
CLK1-209ENST00000472679 OOSP1A8MZH6 123 aa-0.65□□□□□ -2.51
CLK1-209ENST00000472679 TSTD3H0UI37 97 aa-0.65□□□□□ -2.51
CLK1-209ENST00000472679 H3BUA1 57 aa-0.65□□□□□ -2.51
CLK1-209ENST00000472679 NDUFC1O43677 76 aa-0.65□□□□□ -2.51
CLK1-209ENST00000472679 C3orf79P0CE67 100 aa-0.65□□□□□ -2.51
CLK1-209ENST00000472679 Q8IZM0 81 aa-0.65□□□□□ -2.51
CLK1-209ENST00000472679 C4orf33Q8N1A6 199 aa-0.65□□□□□ -2.51
CLK1-209ENST00000472679 SELENOSQ9BQE4 189 aa-0.65□□□□□ -2.51
CLK1-209ENST00000472679 IGLV5-48A0A075B6I7 105 aa-0.66□□□□□ -2.52
CLK1-209ENST00000472679 A0A1B0GX51 115 aa-0.66□□□□□ -2.52
CLK1-209ENST00000472679 TMEM262E9PQX1 116 aa-0.66□□□□□ -2.52
CLK1-209ENST00000472679 GYPAP02724 150 aa-0.66□□□□□ -2.52
CLK1-209ENST00000472679 RBP4P02753 201 aa-0.66□□□□□ -2.52
CLK1-209ENST00000472679 ACYP2P14621 99 aa-0.66□□□□□ -2.52
CLK1-209ENST00000472679 RPS27P42677 84 aaKnown RBP-0.66□□□□□ -2.52
CLK1-209ENST00000472679 CLLU1Q5K131 121 aa-0.66□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms