RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 ETDCA0A1B0GVM5 59 aa5.01□□□□□ -1.61
VCL-204ENST00000472585 C9orf92A6NGG3 77 aa5.01□□□□□ -1.61
VCL-204ENST00000472585 APOC3P02656 99 aa5.01□□□□□ -1.61
VCL-204ENST00000472585 MIR7-3HGQ8N6C7 128 aa5.01□□□□□ -1.61
VCL-204ENST00000472585 TMEM223A0PJW6 202 aa5□□□□□ -1.61
VCL-204ENST00000472585 SVBPQ8N300 66 aa5□□□□□ -1.61
VCL-204ENST00000472585 TRAV9-1A0A075B6T8 112 aa4.99□□□□□ -1.61
VCL-204ENST00000472585 FABP9Q0Z7S8 132 aa4.99□□□□□ -1.61
VCL-204ENST00000472585 ST20-AS1Q8NBB2 130 aa4.99□□□□□ -1.61
VCL-204ENST00000472585 SMCO4Q9NRQ5 59 aa4.99□□□□□ -1.61
VCL-204ENST00000472585 SSPOA2VEC9 5147 aa4.98□□□□□ -1.61
VCL-204ENST00000472585 SNAPINO95295 136 aa4.98□□□□□ -1.61
VCL-204ENST00000472585 LINC00614P0C842 121 aa4.98□□□□□ -1.61
VCL-204ENST00000472585 SFTA2Q6UW10 78 aa4.98□□□□□ -1.61
VCL-204ENST00000472585 C18orf32Q8TCD1 76 aa4.98□□□□□ -1.61
VCL-204ENST00000472585 HBDP02042 147 aa4.97□□□□□ -1.61
VCL-204ENST00000472585 Q6ZRX8 168 aa4.97□□□□□ -1.61
VCL-204ENST00000472585 CHTOPQ9Y3Y2 248 aaKnown RBP4.97□□□□□ -1.61
VCL-204ENST00000472585 LOC107984156A0A0G2JMH3 177 aa4.96□□□□□ -1.62
VCL-204ENST00000472585 CFC1P0CG37 223 aa4.96□□□□□ -1.62
VCL-204ENST00000472585 DDTP30046 118 aa4.96□□□□□ -1.62
VCL-204ENST00000472585 RHEBQ15382 184 aa4.96□□□□□ -1.62
VCL-204ENST00000472585 MEIG1Q5JSS6 88 aa4.96□□□□□ -1.62
VCL-204ENST00000472585 ARL17AQ8IVW1 177 aa4.96□□□□□ -1.62
VCL-204ENST00000472585 USH2AO75445 5202 aa4.96□□□□□ -1.62
VCL-204ENST00000472585 FCGBPQ9Y6R7 5405 aaPredicted RBP4.95□□□□□ -1.62
VCL-204ENST00000472585 TSPEAR-AS2P59090 65 aa4.95□□□□□ -1.62
VCL-204ENST00000472585 C9orf153Q5TBE3 101 aa4.95□□□□□ -1.62
VCL-204ENST00000472585 HRCT1Q6UXD1 115 aa4.95□□□□□ -1.62
VCL-204ENST00000472585 IGLV6-57P01721 117 aa4.94□□□□□ -1.62
VCL-204ENST00000472585 RPS10P5Q9NQ39 176 aa4.94□□□□□ -1.62
VCL-204ENST00000472585 TRBV10-2A0A0K0K1G8 114 aa4.93□□□□□ -1.62
VCL-204ENST00000472585 YPEL4Q96NS1 127 aa4.93□□□□□ -1.62
VCL-204ENST00000472585 TRAV12-1A0A0B4J245 112 aa4.92□□□□□ -1.62
VCL-204ENST00000472585 COLCA2A8K830 154 aa4.92□□□□□ -1.62
VCL-204ENST00000472585 S100PP25815 95 aa4.92□□□□□ -1.62
VCL-204ENST00000472585 HERV-K104P63124 156 aa4.92□□□□□ -1.62
VCL-204ENST00000472585 COX19Q49B96 90 aa4.92□□□□□ -1.62
VCL-204ENST00000472585 SOSTDC1Q6X4U4 206 aa4.92□□□□□ -1.62
VCL-204ENST00000472585 SPRR1BP22528 89 aa4.91□□□□□ -1.62
VCL-204ENST00000472585 LIMD2Q9BT23 127 aa4.91□□□□□ -1.62
VCL-204ENST00000472585 TRAPPC1Q9Y5R8 145 aa4.91□□□□□ -1.62
VCL-204ENST00000472585 S100A12P80511 92 aa4.9□□□□□ -1.63
VCL-204ENST00000472585 Q6Q795 121 aa4.9□□□□□ -1.63
VCL-204ENST00000472585 IFI27L1Q96BM0 104 aa4.9□□□□□ -1.63
VCL-204ENST00000472585 TRAV23DV6A0A075B6W5 121 aa4.89□□□□□ -1.63
VCL-204ENST00000472585 A0A0G2JQZ4 141 aa4.89□□□□□ -1.63
VCL-204ENST00000472585 MYMXA0A1B0GTQ4 84 aa4.89□□□□□ -1.63
VCL-204ENST00000472585 ZNF73O43830 326 aaPredicted RBP4.89□□□□□ -1.63
VCL-204ENST00000472585 RPL37P61927 97 aaKnown RBP4.89□□□□□ -1.63
VCL-204ENST00000472585 ADAMTSL4-AS1Q5T5F5 129 aa4.89□□□□□ -1.63
VCL-204ENST00000472585 C1orf195Q5TG92 126 aa4.89□□□□□ -1.63
VCL-204ENST00000472585 KRTAP9-8Q9BYQ0 159 aa4.89□□□□□ -1.63
VCL-204ENST00000472585 SPANXB1Q9NS25 103 aaPredicted RBP4.89□□□□□ -1.63
VCL-204ENST00000472585 LINC00587B1AMM8 73 aa4.88□□□□□ -1.63
VCL-204ENST00000472585 H7C2G1 150 aa4.88□□□□□ -1.63
VCL-204ENST00000472585 SYNE2Q8WXH0 6885 aaKnown RBP4.88□□□□□ -1.63
VCL-204ENST00000472585 MACF1Q9UPN3 7388 aaKnown RBP4.87□□□□□ -1.63
VCL-204ENST00000472585 LEPROTO15243 131 aa4.87□□□□□ -1.63
VCL-204ENST00000472585 TRIAP1O43715 76 aa4.87□□□□□ -1.63
VCL-204ENST00000472585 NDUFC2O95298 119 aa4.87□□□□□ -1.63
VCL-204ENST00000472585 NPC2P61916 151 aa4.87□□□□□ -1.63
VCL-204ENST00000472585 JOSD1Q15040 202 aaPredicted RBP4.87□□□□□ -1.63
VCL-204ENST00000472585 S100A7L2Q5SY68 101 aa4.87□□□□□ -1.63
VCL-204ENST00000472585 MAP1LC3CQ9BXW4 147 aa4.87□□□□□ -1.63
VCL-204ENST00000472585 C5orf52A6NGY3 159 aa4.86□□□□□ -1.63
VCL-204ENST00000472585 J3QQQ9 107 aa4.85□□□□□ -1.63
VCL-204ENST00000472585 Q5XG85 94 aa4.85□□□□□ -1.63
VCL-204ENST00000472585 SMIM29Q86T20 159 aa4.85□□□□□ -1.63
VCL-204ENST00000472585 LINC00518Q8N0U6 118 aa4.85□□□□□ -1.63
VCL-204ENST00000472585 CD164Q04900 197 aa4.84□□□□□ -1.63
VCL-204ENST00000472585 Q1RN00 199 aa4.84□□□□□ -1.63
VCL-204ENST00000472585 CHCHD1Q96BP2 118 aaKnown RBP4.84□□□□□ -1.63
VCL-204ENST00000472585 LINC00846Q9NV44 126 aa4.84□□□□□ -1.63
VCL-204ENST00000472585 H0Y8G0 127 aa4.83□□□□□ -1.64
VCL-204ENST00000472585 LAMTOR3Q9UHA4 124 aa4.83□□□□□ -1.64
VCL-204ENST00000472585 A0A0J9YXY3 114 aa4.82□□□□□ -1.64
VCL-204ENST00000472585 DEFB105AQ8NG35 78 aa4.82□□□□□ -1.64
VCL-204ENST00000472585 LITAFQ99732 161 aa4.82□□□□□ -1.64
VCL-204ENST00000472585 PMCHL2Q9BQD1 86 aa4.82□□□□□ -1.64
VCL-204ENST00000472585 TRGC2P03986 189 aa4.81□□□□□ -1.64
VCL-204ENST00000472585 SNRPEP62304 92 aaKnown RBP4.81□□□□□ -1.64
VCL-204ENST00000472585 MIEN1Q9BRT3 115 aa4.81□□□□□ -1.64
VCL-204ENST00000472585 PRO1933Q9H354 126 aa4.81□□□□□ -1.64
VCL-204ENST00000472585 SMIM6P0DI80 62 aa4.8□□□□□ -1.64
VCL-204ENST00000472585 NMUP48645 174 aa4.8□□□□□ -1.64
VCL-204ENST00000472585 ELOF1P60002 83 aaKnown RBP4.8□□□□□ -1.64
VCL-204ENST00000472585 DHRS4-AS1Q9P1J3 65 aa4.8□□□□□ -1.64
VCL-204ENST00000472585 HIST1H2BKO60814 126 aa4.79□□□□□ -1.64
VCL-204ENST00000472585 S100A6P06703 90 aa4.79□□□□□ -1.64
VCL-204ENST00000472585 HIST1H2BJP06899 126 aa4.79□□□□□ -1.64
VCL-204ENST00000472585 HIST1H2BOP23527 126 aa4.79□□□□□ -1.64
VCL-204ENST00000472585 HIST1H2BBP33778 126 aa4.79□□□□□ -1.64
VCL-204ENST00000472585 HIST1H2BDP58876 126 aa4.79□□□□□ -1.64
VCL-204ENST00000472585 HIST1H2BCP62807 126 aa4.79□□□□□ -1.64
VCL-204ENST00000472585 HIST2H2BEQ16778 126 aa4.79□□□□□ -1.64
VCL-204ENST00000472585 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.79□□□□□ -1.64
VCL-204ENST00000472585 SLC25A34Q6PIV7 304 aa4.79□□□□□ -1.64
VCL-204ENST00000472585 LINC00308Q8TCZ7 52 aa4.79□□□□□ -1.64
VCL-204ENST00000472585 HIST1H2BHQ93079 126 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms