RNA–Protein interactions for RNA: ENST00000472170.1

TSPAN1-205, Transcript of tetraspanin 1, humanhuman

TSL 3

Gene TSPAN1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-205ENST00000472170 TRBV20-1A0A075B6N2 111 aa5.15□□□□□ -1.59
TSPAN1-205ENST00000472170 TRAV12-1A0A0B4J245 112 aa5.15□□□□□ -1.59
TSPAN1-205ENST00000472170 CCDC179H3BU77 68 aa5.15□□□□□ -1.59
TSPAN1-205ENST00000472170 OR13C6PQ8NH95 151 aa5.15□□□□□ -1.59
TSPAN1-205ENST00000472170 PPDPFQ9H3Y8 114 aa5.15□□□□□ -1.59
TSPAN1-205ENST00000472170 SNCGO76070 127 aa5.14□□□□□ -1.59
TSPAN1-205ENST00000472170 ZNF22P17026 224 aaPredicted RBP5.14□□□□□ -1.59
TSPAN1-205ENST00000472170 RPL28P46779 137 aaKnown RBP5.14□□□□□ -1.59
TSPAN1-205ENST00000472170 SMCPP49901 116 aaPredicted RBP5.14□□□□□ -1.59
TSPAN1-205ENST00000472170 NHP2Q9NX24 153 aaKnown RBP5.14□□□□□ -1.59
TSPAN1-205ENST00000472170 A0A096LNJ9 63 aa5.13□□□□□ -1.59
TSPAN1-205ENST00000472170 IGLV5-39A0A0G2JS06 123 aa5.13□□□□□ -1.59
TSPAN1-205ENST00000472170 ZNF861PO60384 105 aa5.13□□□□□ -1.59
TSPAN1-205ENST00000472170 LINC00158P58513 81 aa5.13□□□□□ -1.59
TSPAN1-205ENST00000472170 MEIG1Q5JSS6 88 aa5.13□□□□□ -1.59
TSPAN1-205ENST00000472170 IGLV1-50A0A075B6I6 118 aa5.12□□□□□ -1.59
TSPAN1-205ENST00000472170 C11orf86A6NJI1 115 aa5.12□□□□□ -1.59
TSPAN1-205ENST00000472170 H0Y9J4 135 aa5.12□□□□□ -1.59
TSPAN1-205ENST00000472170 RPL13AP40429 203 aaKnown RBP5.12□□□□□ -1.59
TSPAN1-205ENST00000472170 HERVK_113P61574 105 aa5.12□□□□□ -1.59
TSPAN1-205ENST00000472170 ZNF625Q96I27 306 aaPredicted RBP5.12□□□□□ -1.59
TSPAN1-205ENST00000472170 LINC00167Q96N53 147 aa5.12□□□□□ -1.59
TSPAN1-205ENST00000472170 FAM240AA0A1B0GVK7 77 aa5.11□□□□□ -1.59
TSPAN1-205ENST00000472170 RPL37AP8A6NKH3 93 aa5.11□□□□□ -1.59
TSPAN1-205ENST00000472170 K7ERJ3 54 aa5.11□□□□□ -1.59
TSPAN1-205ENST00000472170 MT1HL1P0DM35 61 aa5.11□□□□□ -1.59
TSPAN1-205ENST00000472170 NMUP48645 174 aa5.11□□□□□ -1.59
TSPAN1-205ENST00000472170 UBE2AP49459 152 aa5.11□□□□□ -1.59
TSPAN1-205ENST00000472170 PCP2Q8IVA1 136 aa5.11□□□□□ -1.59
TSPAN1-205ENST00000472170 IMUPQ9GZP8 106 aa5.11□□□□□ -1.59
TSPAN1-205ENST00000472170 TRBV7-7A0A0K0K1E9 115 aa5.1□□□□□ -1.59
TSPAN1-205ENST00000472170 MYMXA0A1B0GTQ4 84 aa5.1□□□□□ -1.59
TSPAN1-205ENST00000472170 TMEM223A0PJW6 202 aa5.1□□□□□ -1.59
TSPAN1-205ENST00000472170 BCE1O60756 84 aa5.1□□□□□ -1.59
TSPAN1-205ENST00000472170 PLNP26678 52 aa5.1□□□□□ -1.59
TSPAN1-205ENST00000472170 KRTAP10-8P60410 259 aa5.1□□□□□ -1.59
TSPAN1-205ENST00000472170 SND1-IT1Q9HBX3 110 aa5.1□□□□□ -1.59
TSPAN1-205ENST00000472170 IGLV5-37A0A075B6J1 123 aa5.09□□□□□ -1.59
TSPAN1-205ENST00000472170 KRTAP7-1Q8IUC3 87 aa5.09□□□□□ -1.59
TSPAN1-205ENST00000472170 PLEKHB2Q96CS7 222 aa5.09□□□□□ -1.59
TSPAN1-205ENST00000472170 UQCRQO14949 82 aa5.08□□□□□ -1.6
TSPAN1-205ENST00000472170 DPM2O94777 84 aa5.08□□□□□ -1.6
TSPAN1-205ENST00000472170 IGKCP01834 107 aa5.08□□□□□ -1.6
TSPAN1-205ENST00000472170 SCGB1C2P0DMR2 95 aa5.08□□□□□ -1.6
TSPAN1-205ENST00000472170 LGALS3P17931 250 aaKnown RBP5.08□□□□□ -1.6
TSPAN1-205ENST00000472170 IGKV2-28A0A075B6P5 120 aa5.07□□□□□ -1.6
TSPAN1-205ENST00000472170 A0A0U1RRA0 63 aa5.07□□□□□ -1.6
TSPAN1-205ENST00000472170 C9JAW5 83 aa5.07□□□□□ -1.6
TSPAN1-205ENST00000472170 IGKV2D-28P01615 120 aa5.07□□□□□ -1.6
TSPAN1-205ENST00000472170 CRYGAP11844 174 aa5.07□□□□□ -1.6
TSPAN1-205ENST00000472170 KRTAP11-1Q8IUC1 163 aa5.07□□□□□ -1.6
TSPAN1-205ENST00000472170 ANKRD29Q8N6D5 301 aa5.07□□□□□ -1.6
TSPAN1-205ENST00000472170 PRR26Q8N8Z3 221 aa5.07□□□□□ -1.6
TSPAN1-205ENST00000472170 NDUFA12Q9UI09 145 aa5.07□□□□□ -1.6
TSPAN1-205ENST00000472170 IGKV2D-26A0A0A0MRZ7 120 aa5.06□□□□□ -1.6
TSPAN1-205ENST00000472170 M0R378 163 aa5.06□□□□□ -1.6
TSPAN1-205ENST00000472170 LEPROTO15243 131 aa5.06□□□□□ -1.6
TSPAN1-205ENST00000472170 FAM19A1Q7Z5A9 133 aa5.06□□□□□ -1.6
TSPAN1-205ENST00000472170 C3orf22Q8N5N4 141 aa5.06□□□□□ -1.6
TSPAN1-205ENST00000472170 HIST1H4GQ99525 98 aa5.06□□□□□ -1.6
TSPAN1-205ENST00000472170 HMCN2Q8NDA2 5059 aa5.05□□□□□ -1.6
TSPAN1-205ENST00000472170 VPREB1P12018 145 aa5.05□□□□□ -1.6
TSPAN1-205ENST00000472170 J3QQQ9 107 aa5.04□□□□□ -1.6
TSPAN1-205ENST00000472170 MIR7-3HGQ8N6C7 128 aa5.04□□□□□ -1.6
TSPAN1-205ENST00000472170 LRP1Q07954 4544 aaKnown RBP5.04□□□□□ -1.6
TSPAN1-205ENST00000472170 SLC25A20O43772 301 aa5.03□□□□□ -1.6
TSPAN1-205ENST00000472170 ACYP1P07311 99 aa5.03□□□□□ -1.6
TSPAN1-205ENST00000472170 PSMB2P49721 201 aa5.03□□□□□ -1.6
TSPAN1-205ENST00000472170 TMEM258P61165 79 aa5.03□□□□□ -1.6
TSPAN1-205ENST00000472170 C9orf153Q5TBE3 101 aa5.03□□□□□ -1.6
TSPAN1-205ENST00000472170 TYMSOSQ8TAI1 123 aa5.03□□□□□ -1.6
TSPAN1-205ENST00000472170 H3BT86 120 aa5.02□□□□□ -1.61
TSPAN1-205ENST00000472170 TCL1BO95988 128 aa5.02□□□□□ -1.61
TSPAN1-205ENST00000472170 S100A7L2Q5SY68 101 aa5.02□□□□□ -1.61
TSPAN1-205ENST00000472170 ZNF706Q9Y5V0 76 aaPredicted RBP5.02□□□□□ -1.61
TSPAN1-205ENST00000472170 ETDCA0A1B0GVM5 59 aa5.01□□□□□ -1.61
TSPAN1-205ENST00000472170 PRYO14603 147 aa5.01□□□□□ -1.61
TSPAN1-205ENST00000472170 KRTAP1-4P0C5Y4 121 aa5.01□□□□□ -1.61
TSPAN1-205ENST00000472170 FAM229BQ4G0N7 80 aa5.01□□□□□ -1.61
TSPAN1-205ENST00000472170 HIGD2AQ9BW72 106 aa5.01□□□□□ -1.61
TSPAN1-205ENST00000472170 COX7CP15954 63 aa5□□□□□ -1.61
TSPAN1-205ENST00000472170 PRLHP81277 87 aa5□□□□□ -1.61
TSPAN1-205ENST00000472170 PRO0628Q9UI54 55 aa5□□□□□ -1.61
TSPAN1-205ENST00000472170 FAT3Q8TDW7 4589 aa5□□□□□ -1.61
TSPAN1-205ENST00000472170 LOC107984156A0A0G2JMH3 177 aa4.99□□□□□ -1.61
TSPAN1-205ENST00000472170 TRBV10-2A0A0K0K1G8 114 aa4.99□□□□□ -1.61
TSPAN1-205ENST00000472170 NCR3O14931 201 aa4.99□□□□□ -1.61
TSPAN1-205ENST00000472170 ATXN8Q156A1 80 aa4.99□□□□□ -1.61
TSPAN1-205ENST00000472170 ARL17AQ8IVW1 177 aa4.99□□□□□ -1.61
TSPAN1-205ENST00000472170 COPS9Q8WXC6 57 aa4.99□□□□□ -1.61
TSPAN1-205ENST00000472170 PKHD1L1Q86WI1 4243 aa4.99□□□□□ -1.61
TSPAN1-205ENST00000472170 A0A0B4J2C4 111 aa4.98□□□□□ -1.61
TSPAN1-205ENST00000472170 ATOX1O00244 68 aa4.98□□□□□ -1.61
TSPAN1-205ENST00000472170 NDUFC2O95298 119 aa4.98□□□□□ -1.61
TSPAN1-205ENST00000472170 PRR4Q16378 134 aa4.98□□□□□ -1.61
TSPAN1-205ENST00000472170 GAGE2AQ6NT46 116 aa4.98□□□□□ -1.61
TSPAN1-205ENST00000472170 LINC00337Q8N6G1 96 aa4.98□□□□□ -1.61
TSPAN1-205ENST00000472170 TTTY13Q9BZ97 58 aa4.98□□□□□ -1.61
TSPAN1-205ENST00000472170 KCNQ1DNQ9H478 68 aa4.98□□□□□ -1.61
TSPAN1-205ENST00000472170 HIST1H4AP62805 103 aaKnown RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms