RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 RPS10P5Q9NQ39 176 aa10.44□□□□□ -0.74
CCDC78-208ENST00000471861 ZNF73O43830 326 aaPredicted RBP10.43□□□□□ -0.74
CCDC78-208ENST00000471861 RHEBQ15382 184 aa10.43□□□□□ -0.74
CCDC78-208ENST00000471861 S100A7L2Q5SY68 101 aa10.42□□□□□ -0.74
CCDC78-208ENST00000471861 C5orf52A6NGY3 159 aa10.41□□□□□ -0.74
CCDC78-208ENST00000471861 IFI27L1Q96BM0 104 aa10.41□□□□□ -0.74
CCDC78-208ENST00000471861 FCGBPQ9Y6R7 5405 aaPredicted RBP10.4□□□□□ -0.74
CCDC78-208ENST00000471861 NDUFC2O95298 119 aa10.4□□□□□ -0.74
CCDC78-208ENST00000471861 EIF4EBP3O60516 100 aaPredicted RBP10.39□□□□□ -0.75
CCDC78-208ENST00000471861 TRAPPC1Q9Y5R8 145 aa10.39□□□□□ -0.75
CCDC78-208ENST00000471861 SOSTDC1Q6X4U4 206 aa10.38□□□□□ -0.75
CCDC78-208ENST00000471861 H7C2G1 150 aa10.37□□□□□ -0.75
CCDC78-208ENST00000471861 APOC3P02656 99 aa10.37□□□□□ -0.75
CCDC78-208ENST00000471861 C1orf195Q5TG92 126 aa10.37□□□□□ -0.75
CCDC78-208ENST00000471861 NDUFA5Q16718 116 aa10.36□□□□□ -0.75
CCDC78-208ENST00000471861 MIEN1Q9BRT3 115 aa10.36□□□□□ -0.75
CCDC78-208ENST00000471861 SNAPINO95295 136 aa10.35□□□□□ -0.75
CCDC78-208ENST00000471861 CD164Q04900 197 aa10.35□□□□□ -0.75
CCDC78-208ENST00000471861 Q5XG85 94 aa10.34□□□□□ -0.75
CCDC78-208ENST00000471861 SLC25A34Q6PIV7 304 aa10.34□□□□□ -0.75
CCDC78-208ENST00000471861 SVBPQ8N300 66 aa10.34□□□□□ -0.75
CCDC78-208ENST00000471861 KRTAP9-8Q9BYQ0 159 aa10.34□□□□□ -0.75
CCDC78-208ENST00000471861 LEPROTO15243 131 aa10.33□□□□□ -0.76
CCDC78-208ENST00000471861 LAMTOR3Q9UHA4 124 aa10.33□□□□□ -0.76
CCDC78-208ENST00000471861 NPC2P61916 151 aa10.32□□□□□ -0.76
CCDC78-208ENST00000471861 Q1RN00 199 aa10.31□□□□□ -0.76
CCDC78-208ENST00000471861 J3QQQ9 107 aa10.29□□□□□ -0.76
CCDC78-208ENST00000471861 CHCHD1Q96BP2 118 aaKnown RBP10.29□□□□□ -0.76
CCDC78-208ENST00000471861 A0A0G2JQZ4 141 aa10.28□□□□□ -0.76
CCDC78-208ENST00000471861 CFC1P0CG37 223 aa10.28□□□□□ -0.76
CCDC78-208ENST00000471861 ADAMTSL4-AS1Q5T5F5 129 aa10.28□□□□□ -0.76
CCDC78-208ENST00000471861 PRO1933Q9H354 126 aa10.28□□□□□ -0.76
CCDC78-208ENST00000471861 DHRS4-AS1Q9P1J3 65 aa10.28□□□□□ -0.76
CCDC78-208ENST00000471861 H0Y8G0 127 aa10.27□□□□□ -0.77
CCDC78-208ENST00000471861 HINT1P49773 126 aaPredicted RBP10.27□□□□□ -0.77
CCDC78-208ENST00000471861 Q6Q795 121 aa10.27□□□□□ -0.77
CCDC78-208ENST00000471861 SMIM29Q86T20 159 aa10.27□□□□□ -0.77
CCDC78-208ENST00000471861 NMUP48645 174 aa10.25□□□□□ -0.77
CCDC78-208ENST00000471861 YPEL4Q96NS1 127 aa10.25□□□□□ -0.77
CCDC78-208ENST00000471861 SLC7A5P1Q8MH63 180 aa10.23□□□□□ -0.77
CCDC78-208ENST00000471861 ELOF1P60002 83 aaKnown RBP10.22□□□□□ -0.77
CCDC78-208ENST00000471861 DEFB105AQ8NG35 78 aa10.22□□□□□ -0.77
CCDC78-208ENST00000471861 A0A0J9YXY3 114 aa10.21□□□□□ -0.77
CCDC78-208ENST00000471861 LGALS3P17931 250 aaKnown RBP10.21□□□□□ -0.77
CCDC78-208ENST00000471861 KRTAP19-1Q8IUB9 90 aa10.21□□□□□ -0.77
CCDC78-208ENST00000471861 CBY1Q9Y3M2 126 aa10.21□□□□□ -0.77
CCDC78-208ENST00000471861 AKR1D1P51857 326 aa10.2□□□□□ -0.78
CCDC78-208ENST00000471861 TAL2Q16559 108 aa10.2□□□□□ -0.78
CCDC78-208ENST00000471861 TEX49A0A1B0GTD5 131 aa10.19□□□□□ -0.78
CCDC78-208ENST00000471861 PLNP26678 52 aa10.19□□□□□ -0.78
CCDC78-208ENST00000471861 OR13C6PQ8NH95 151 aa10.19□□□□□ -0.78
CCDC78-208ENST00000471861 COX7BP24311 80 aa10.18□□□□□ -0.78
CCDC78-208ENST00000471861 SPANXCQ9NY87 97 aa10.18□□□□□ -0.78
CCDC78-208ENST00000471861 HSBP1O75506 76 aa10.17□□□□□ -0.78
CCDC78-208ENST00000471861 HERVK_113P61574 105 aa10.17□□□□□ -0.78
CCDC78-208ENST00000471861 C6orf99Q4VX62 202 aa10.17□□□□□ -0.78
CCDC78-208ENST00000471861 LITAFQ99732 161 aa10.17□□□□□ -0.78
CCDC78-208ENST00000471861 PMCHL2Q9BQD1 86 aa10.17□□□□□ -0.78
CCDC78-208ENST00000471861 SYNE2Q8WXH0 6885 aaKnown RBP10.16□□□□□ -0.78
CCDC78-208ENST00000471861 MACF1Q9UPN3 7388 aaKnown RBP10.16□□□□□ -0.78
CCDC78-208ENST00000471861 LCE2BO14633 110 aa10.15□□□□□ -0.78
CCDC78-208ENST00000471861 LINC00308Q8TCZ7 52 aa10.15□□□□□ -0.78
CCDC78-208ENST00000471861 DPM2O94777 84 aa10.14□□□□□ -0.79
CCDC78-208ENST00000471861 LINC00310P59036 64 aa10.13□□□□□ -0.79
CCDC78-208ENST00000471861 SPANXDQ9BXN6 97 aa10.13□□□□□ -0.79
CCDC78-208ENST00000471861 IGLV5-48A0A075B6I7 105 aa10.12□□□□□ -0.79
CCDC78-208ENST00000471861 LEPROTL1O95214 131 aa10.12□□□□□ -0.79
CCDC78-208ENST00000471861 MT2AP02795 61 aa10.12□□□□□ -0.79
CCDC78-208ENST00000471861 IGKCP01834 107 aa10.11□□□□□ -0.79
CCDC78-208ENST00000471861 Q75L30 129 aa10.11□□□□□ -0.79
CCDC78-208ENST00000471861 ATP11AUNQ6ZP68 121 aa10.09□□□□□ -0.79
CCDC78-208ENST00000471861 TCL1BO95988 128 aa10.08□□□□□ -0.8
CCDC78-208ENST00000471861 TRGC2P03986 189 aa10.08□□□□□ -0.8
CCDC78-208ENST00000471861 E9PLD3 99 aa10.07□□□□□ -0.8
CCDC78-208ENST00000471861 OBSCN-AS1Q96MR7 158 aa10.07□□□□□ -0.8
CCDC78-208ENST00000471861 SERF1AO75920 110 aa10.06□□□□□ -0.8
CCDC78-208ENST00000471861 MT1FP04733 61 aa10.06□□□□□ -0.8
CCDC78-208ENST00000471861 COLCA2A8K830 154 aa10.05□□□□□ -0.8
CCDC78-208ENST00000471861 TRBV7-6A0A0J9YX20 115 aa10.04□□□□□ -0.8
CCDC78-208ENST00000471861 C20orf202A1L168 122 aa10.04□□□□□ -0.8
CCDC78-208ENST00000471861 PCP2Q8IVA1 136 aa10.04□□□□□ -0.8
CCDC78-208ENST00000471861 TIMM17BO60830 172 aa10.03□□□□□ -0.8
CCDC78-208ENST00000471861 FABP4P15090 132 aa10.03□□□□□ -0.8
CCDC78-208ENST00000471861 KRTAP9-3Q9BYQ3 159 aa10.03□□□□□ -0.8
CCDC78-208ENST00000471861 HSPB8Q9UJY1 196 aa10.02□□□□□ -0.81
CCDC78-208ENST00000471861 A0A1B0GWB2 263 aa10□□□□□ -0.81
CCDC78-208ENST00000471861 LINC00518Q8N0U6 118 aa10□□□□□ -0.81
CCDC78-208ENST00000471861 TTTY13Q9BZ97 58 aa9.96□□□□□ -0.82
CCDC78-208ENST00000471861 TRBV7-7A0A0K0K1E9 115 aa9.94□□□□□ -0.82
CCDC78-208ENST00000471861 ZNF815PA8K554 130 aa9.93□□□□□ -0.82
CCDC78-208ENST00000471861 Q96NJ1 140 aa9.92□□□□□ -0.82
CCDC78-208ENST00000471861 C20orf166-AS1Q96NR2 134 aa9.91□□□□□ -0.82
CCDC78-208ENST00000471861 KRTAP10-10P60014 251 aa9.9□□□□□ -0.82
CCDC78-208ENST00000471861 IGFL1Q6UW32 110 aa9.9□□□□□ -0.82
CCDC78-208ENST00000471861 TRBV20-1A0A075B6N2 111 aa9.89□□□□□ -0.83
CCDC78-208ENST00000471861 F8WEM9 126 aa9.89□□□□□ -0.83
CCDC78-208ENST00000471861 HIST1H2BKO60814 126 aa9.89□□□□□ -0.83
CCDC78-208ENST00000471861 HIST1H2BJP06899 126 aa9.89□□□□□ -0.83
CCDC78-208ENST00000471861 HIST1H2BOP23527 126 aa9.89□□□□□ -0.83
CCDC78-208ENST00000471861 HIST1H2BBP33778 126 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms