RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 QSER1Q2KHR3 1735 aa-3.05□□□□□ -2.9
PRPF40A-207ENST00000471701 hADV29S1A0JD25 119 aa-3.06□□□□□ -2.9
PRPF40A-207ENST00000471701 CACFD1Q9UGQ2 172 aa-3.06□□□□□ -2.9
PRPF40A-207ENST00000471701 C5orf42Q9H799 3197 aa-3.07□□□□□ -2.9
PRPF40A-207ENST00000471701 NRKQ7Z2Y5 1582 aa-3.07□□□□□ -2.9
PRPF40A-207ENST00000471701 ROCK2O75116 1388 aaKnown RBP-3.07□□□□□ -2.9
PRPF40A-207ENST00000471701 KRTDAPP60985 99 aa-3.07□□□□□ -2.9
PRPF40A-207ENST00000471701 COL12A1Q99715 3063 aa-3.07□□□□□ -2.9
PRPF40A-207ENST00000471701 SCN11AQ9UI33 1791 aa-3.07□□□□□ -2.9
PRPF40A-207ENST00000471701 TRBV25-1A0A075B6N4 114 aa-3.08□□□□□ -2.9
PRPF40A-207ENST00000471701 H0YAA0 97 aa-3.08□□□□□ -2.9
PRPF40A-207ENST00000471701 ABCC5O15440 1437 aa-3.09□□□□□ -2.9
PRPF40A-207ENST00000471701 NALCNQ8IZF0 1738 aa-3.09□□□□□ -2.9
PRPF40A-207ENST00000471701 DEFB110Q30KQ9 67 aa-3.09□□□□□ -2.9
PRPF40A-207ENST00000471701 AP4S1Q9Y587 144 aa-3.09□□□□□ -2.9
PRPF40A-207ENST00000471701 IER3IP1Q9Y5U9 82 aa-3.09□□□□□ -2.9
PRPF40A-207ENST00000471701 PMCHL1Q16048 86 aa-3.1□□□□□ -2.91
PRPF40A-207ENST00000471701 MAGI2Q86UL8 1455 aa-3.1□□□□□ -2.91
PRPF40A-207ENST00000471701 CEP290O15078 2479 aa-3.11□□□□□ -2.91
PRPF40A-207ENST00000471701 H3BQ15 152 aa-3.11□□□□□ -2.91
PRPF40A-207ENST00000471701 IGLC2P0DOY2 106 aa-3.11□□□□□ -2.91
PRPF40A-207ENST00000471701 IGLC3P0DOY3 106 aa-3.11□□□□□ -2.91
PRPF40A-207ENST00000471701 TSC22D3Q99576 134 aa-3.11□□□□□ -2.91
PRPF40A-207ENST00000471701 ABCA3Q99758 1704 aa-3.12□□□□□ -2.91
PRPF40A-207ENST00000471701 DEFB1P60022 68 aa-3.12□□□□□ -2.91
PRPF40A-207ENST00000471701 COX6B2Q6YFQ2 88 aa-3.12□□□□□ -2.91
PRPF40A-207ENST00000471701 FAM135AQ9P2D6 1515 aa-3.13□□□□□ -2.91
PRPF40A-207ENST00000471701 KRTAP19-5Q3LI72 72 aa-3.13□□□□□ -2.91
PRPF40A-207ENST00000471701 RGPD8O14715 1765 aaPredicted RBP-3.14□□□□□ -2.91
PRPF40A-207ENST00000471701 RGPD5Q99666 1765 aa-3.14□□□□□ -2.91
PRPF40A-207ENST00000471701 H7BZZ5 65 aa-3.14□□□□□ -2.91
PRPF40A-207ENST00000471701 UBR3Q6ZT12 1888 aa-3.14□□□□□ -2.91
PRPF40A-207ENST00000471701 TNRC6CQ9HCJ0 1690 aaKnown RBP-3.14□□□□□ -2.91
PRPF40A-207ENST00000471701 MLH3Q9UHC1 1453 aa-3.15□□□□□ -2.91
PRPF40A-207ENST00000471701 PKD1L3Q7Z443 1732 aa-3.15□□□□□ -2.91
PRPF40A-207ENST00000471701 K7EP34 96 aa-3.15□□□□□ -2.91
PRPF40A-207ENST00000471701 FAM107BQ9H098 131 aa-3.15□□□□□ -2.91
PRPF40A-207ENST00000471701 CRYBG1Q9Y4K1 1723 aa-3.16□□□□□ -2.92
PRPF40A-207ENST00000471701 COX7BP24311 80 aa-3.17□□□□□ -2.92
PRPF40A-207ENST00000471701 PPP3R1P63098 170 aa-3.17□□□□□ -2.92
PRPF40A-207ENST00000471701 UQCRHP07919 91 aa-3.18□□□□□ -2.92
PRPF40A-207ENST00000471701 GNG4P50150 75 aa-3.18□□□□□ -2.92
PRPF40A-207ENST00000471701 PZPP20742 1482 aa-3.19□□□□□ -2.92
PRPF40A-207ENST00000471701 NRXN1Q9ULB1 1477 aa-3.19□□□□□ -2.92
PRPF40A-207ENST00000471701 TMEM218A2RU14 115 aa-3.19□□□□□ -2.92
PRPF40A-207ENST00000471701 UNC13AQ9UPW8 1703 aa-3.19□□□□□ -2.92
PRPF40A-207ENST00000471701 ABCC2Q92887 1545 aa-3.19□□□□□ -2.92
PRPF40A-207ENST00000471701 LRRC9Q6ZRR7 1453 aa-3.2□□□□□ -2.92
PRPF40A-207ENST00000471701 PRLHP81277 87 aa-3.2□□□□□ -2.92
PRPF40A-207ENST00000471701 TRGV9Q99603 122 aa-3.2□□□□□ -2.92
PRPF40A-207ENST00000471701 PLXNC1O60486 1568 aa-3.21□□□□□ -2.92
PRPF40A-207ENST00000471701 NDUFC1O43677 76 aa-3.21□□□□□ -2.92
PRPF40A-207ENST00000471701 RAPGEF2Q9Y4G8 1499 aa-3.22□□□□□ -2.92
PRPF40A-207ENST00000471701 DYNC2H1Q8NCM8 4307 aaKnown RBP-3.22□□□□□ -2.92
PRPF40A-207ENST00000471701 CHD7Q9P2D1 2997 aa-3.22□□□□□ -2.93
PRPF40A-207ENST00000471701 SRCAPQ6ZRS2 3230 aa-3.23□□□□□ -2.93
PRPF40A-207ENST00000471701 USP32Q8NFA0 1604 aa-3.23□□□□□ -2.93
PRPF40A-207ENST00000471701 D6R8Y8 96 aa-3.25□□□□□ -2.93
PRPF40A-207ENST00000471701 MPC2O95563 127 aa-3.25□□□□□ -2.93
PRPF40A-207ENST00000471701 MUSTN1Q8IVN3 82 aa-3.25□□□□□ -2.93
PRPF40A-207ENST00000471701 LRRC7Q96NW7 1537 aa-3.25□□□□□ -2.93
PRPF40A-207ENST00000471701 GNGT2O14610 69 aa-3.26□□□□□ -2.93
PRPF40A-207ENST00000471701 UBE2D4Q9Y2X8 147 aa-3.26□□□□□ -2.93
PRPF40A-207ENST00000471701 PRDM15P57071 1507 aaPredicted RBP-3.26□□□□□ -2.93
PRPF40A-207ENST00000471701 RGPD3A6NKT7 1758 aaPredicted RBP-3.26□□□□□ -2.93
PRPF40A-207ENST00000471701 RGPD4Q7Z3J3 1758 aa-3.26□□□□□ -2.93
PRPF40A-207ENST00000471701 CORTO00230 105 aa-3.27□□□□□ -2.93
PRPF40A-207ENST00000471701 LEPROTL1O95214 131 aa-3.27□□□□□ -2.93
PRPF40A-207ENST00000471701 S100A1P23297 94 aa-3.27□□□□□ -2.93
PRPF40A-207ENST00000471701 RPL38P63173 70 aaKnown RBP-3.27□□□□□ -2.93
PRPF40A-207ENST00000471701 TLN2Q9Y4G6 2542 aa-3.27□□□□□ -2.93
PRPF40A-207ENST00000471701 SPENQ96T58 3664 aaKnown RBP-3.28□□□□□ -2.93
PRPF40A-207ENST00000471701 MT1XP80297 61 aa-3.28□□□□□ -2.93
PRPF40A-207ENST00000471701 ETDBQ3ZM63 59 aa-3.28□□□□□ -2.93
PRPF40A-207ENST00000471701 PRO3102Q9H379 93 aa-3.28□□□□□ -2.93
PRPF40A-207ENST00000471701 RGPD1P0DJD0 1748 aa-3.28□□□□□ -2.93
PRPF40A-207ENST00000471701 TIAM2Q8IVF5 1701 aa-3.28□□□□□ -2.93
PRPF40A-207ENST00000471701 SPTBN5Q9NRC6 3674 aaKnown RBP-3.28□□□□□ -2.93
PRPF40A-207ENST00000471701 BPTFQ12830 3046 aa-3.28□□□□□ -2.94
PRPF40A-207ENST00000471701 LINC00158P58513 81 aa-3.29□□□□□ -2.94
PRPF40A-207ENST00000471701 CSMD1Q96PZ7 3565 aa-3.3□□□□□ -2.94
PRPF40A-207ENST00000471701 ITPR1Q14643 2758 aa-3.31□□□□□ -2.94
PRPF40A-207ENST00000471701 F8WEM9 126 aa-3.31□□□□□ -2.94
PRPF40A-207ENST00000471701 HMGN3Q15651 99 aa-3.31□□□□□ -2.94
PRPF40A-207ENST00000471701 RPL13AP3Q6NVV1 102 aa-3.31□□□□□ -2.94
PRPF40A-207ENST00000471701 EIF4G3O43432 1585 aaKnown RBP-3.32□□□□□ -2.94
PRPF40A-207ENST00000471701 DLEU1O43261 78 aa-3.32□□□□□ -2.94
PRPF40A-207ENST00000471701 C3orf79P0CE67 100 aa-3.32□□□□□ -2.94
PRPF40A-207ENST00000471701 S100A12P80511 92 aa-3.32□□□□□ -2.94
PRPF40A-207ENST00000471701 ALKAL2Q6UX46 152 aa-3.32□□□□□ -2.94
PRPF40A-207ENST00000471701 A0A1B0GV90 55 aa-3.33□□□□□ -2.94
PRPF40A-207ENST00000471701 CELSR3Q9NYQ7 3312 aa-3.34□□□□□ -2.94
PRPF40A-207ENST00000471701 PMCHL2Q9BQD1 86 aa-3.34□□□□□ -2.94
PRPF40A-207ENST00000471701 SUPT6HQ7KZ85 1726 aaKnown RBP-3.34□□□□□ -2.94
PRPF40A-207ENST00000471701 DNAH17Q9UFH2 4485 aa-3.34□□□□□ -2.94
PRPF40A-207ENST00000471701 CEP295Q9C0D2 2601 aa-3.35□□□□□ -2.95
PRPF40A-207ENST00000471701 WIZO95785 1651 aa-3.35□□□□□ -2.95
PRPF40A-207ENST00000471701 GTF2H5Q6ZYL4 71 aa-3.35□□□□□ -2.95
PRPF40A-207ENST00000471701 NESP48681 1621 aa-3.35□□□□□ -2.95
PRPF40A-207ENST00000471701 ANKRD36BQ8N2N9 1353 aa-3.36□□□□□ -2.95
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms