RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 UQCR11O14957 56 aa4.17□□□□□ -1.74
CCDC144A-212ENST00000470068 HCFC1P51610 2035 aa4.17□□□□□ -1.74
CCDC144A-212ENST00000470068 LITAFQ99732 161 aa4.16□□□□□ -1.74
CCDC144A-212ENST00000470068 KIAA1549Q9HCM3 1950 aa4.16□□□□□ -1.74
CCDC144A-212ENST00000470068 NBDYA0A0U1RRE5 68 aa4.16□□□□□ -1.74
CCDC144A-212ENST00000470068 C18orf65Q6ZTR6 163 aa4.16□□□□□ -1.74
CCDC144A-212ENST00000470068 LINC00528Q8N1L1 170 aa4.16□□□□□ -1.74
CCDC144A-212ENST00000470068 CNBPP62633 177 aaKnown RBP4.16□□□□□ -1.74
CCDC144A-212ENST00000470068 SPINK6Q6UWN8 80 aa4.16□□□□□ -1.74
CCDC144A-212ENST00000470068 Q8NAQ8 132 aa4.16□□□□□ -1.74
CCDC144A-212ENST00000470068 C7orf65Q6ZTY9 151 aa4.15□□□□□ -1.74
CCDC144A-212ENST00000470068 DSPP15924 2871 aaKnown RBP4.15□□□□□ -1.74
CCDC144A-212ENST00000470068 GAS8-AS1O95177 125 aa4.15□□□□□ -1.75
CCDC144A-212ENST00000470068 CIRBP-AS1Q8TBR5 109 aa4.15□□□□□ -1.75
CCDC144A-212ENST00000470068 IGLV1-50A0A075B6I6 118 aa4.15□□□□□ -1.75
CCDC144A-212ENST00000470068 M0R2T5 61 aa4.15□□□□□ -1.75
CCDC144A-212ENST00000470068 ASB16-AS1Q495Z4 193 aa4.15□□□□□ -1.75
CCDC144A-212ENST00000470068 C19orf73Q9NVV2 129 aa4.15□□□□□ -1.75
CCDC144A-212ENST00000470068 SMCPP49901 116 aaPredicted RBP4.14□□□□□ -1.75
CCDC144A-212ENST00000470068 PRR15Q8IV56 129 aa4.14□□□□□ -1.75
CCDC144A-212ENST00000470068 OBSCN-AS1Q96MR7 158 aa4.14□□□□□ -1.75
CCDC144A-212ENST00000470068 C15orf56Q8N910 161 aa4.14□□□□□ -1.75
CCDC144A-212ENST00000470068 PTPRBP23467 1997 aa4.13□□□□□ -1.75
CCDC144A-212ENST00000470068 H3BS24 57 aa4.13□□□□□ -1.75
CCDC144A-212ENST00000470068 SMIM29Q86T20 159 aa4.13□□□□□ -1.75
CCDC144A-212ENST00000470068 FAM229BQ4G0N7 80 aa4.13□□□□□ -1.75
CCDC144A-212ENST00000470068 GOLGB1Q14789 3259 aaKnown RBP4.12□□□□□ -1.75
CCDC144A-212ENST00000470068 ARHGAP32A7KAX9 2087 aa4.12□□□□□ -1.75
CCDC144A-212ENST00000470068 UTRNP46939 3433 aa4.12□□□□□ -1.75
CCDC144A-212ENST00000470068 NSD1Q96L73 2696 aaPredicted RBP4.12□□□□□ -1.75
CCDC144A-212ENST00000470068 IGLV5-48A0A075B6I7 105 aa4.11□□□□□ -1.75
CCDC144A-212ENST00000470068 KMT2BQ9UMN6 2715 aaPredicted RBP4.11□□□□□ -1.75
CCDC144A-212ENST00000470068 TNP2Q05952 138 aa4.11□□□□□ -1.75
CCDC144A-212ENST00000470068 A0A087WVE0 104 aa4.11□□□□□ -1.75
CCDC144A-212ENST00000470068 C9orf163Q8N9P6 203 aa4.11□□□□□ -1.75
CCDC144A-212ENST00000470068 CSNK1G2-AS1Q8NCQ2 148 aa4.11□□□□□ -1.75
CCDC144A-212ENST00000470068 A0A1B0GVX0 72 aa4.1□□□□□ -1.75
CCDC144A-212ENST00000470068 A0A096LNI7 61 aa4.1□□□□□ -1.75
CCDC144A-212ENST00000470068 ZNF575Q86XF7 245 aa4.1□□□□□ -1.75
CCDC144A-212ENST00000470068 RBM12B-AS1Q9P1G2 102 aa4.1□□□□□ -1.75
CCDC144A-212ENST00000470068 ZNF861PO60384 105 aa4.1□□□□□ -1.75
CCDC144A-212ENST00000470068 SOSTDC1Q6X4U4 206 aa4.1□□□□□ -1.75
CCDC144A-212ENST00000470068 SPINK1P00995 79 aa4.09□□□□□ -1.75
CCDC144A-212ENST00000470068 KTN1-AS1Q86SY8 53 aa4.09□□□□□ -1.75
CCDC144A-212ENST00000470068 C8orf17Q9NRJ1 99 aa4.09□□□□□ -1.75
CCDC144A-212ENST00000470068 RANBP2P49792 3224 aaKnown RBP4.09□□□□□ -1.75
CCDC144A-212ENST00000470068 PLXNB1O43157 2135 aa4.09□□□□□ -1.75
CCDC144A-212ENST00000470068 RTL8CO15255 209 aa4.09□□□□□ -1.76
CCDC144A-212ENST00000470068 TYMSOSQ8TAI1 123 aa4.09□□□□□ -1.76
CCDC144A-212ENST00000470068 KRTAP10-11P60412 298 aa4.08□□□□□ -1.76
CCDC144A-212ENST00000470068 MUC4Q99102 2169 aa4.08□□□□□ -1.76
CCDC144A-212ENST00000470068 Q9UF83 564 aa4.08□□□□□ -1.76
CCDC144A-212ENST00000470068 BPTFQ12830 3046 aa4.08□□□□□ -1.76
CCDC144A-212ENST00000470068 KRTAP1-3Q8IUG1 177 aa4.08□□□□□ -1.76
CCDC144A-212ENST00000470068 ST20-AS1Q8NBB2 130 aa4.08□□□□□ -1.76
CCDC144A-212ENST00000470068 KRTAP1-1Q07627 177 aa4.08□□□□□ -1.76
CCDC144A-212ENST00000470068 ASH1LQ9NR48 2969 aaKnown RBP4.08□□□□□ -1.76
CCDC144A-212ENST00000470068 Q1T7F1 81 aa4.07□□□□□ -1.76
CCDC144A-212ENST00000470068 LCA10Q71F78 164 aa4.07□□□□□ -1.76
CCDC144A-212ENST00000470068 PCNTO95613 3336 aa4.07□□□□□ -1.76
CCDC144A-212ENST00000470068 SPRR4Q96PI1 79 aa4.07□□□□□ -1.76
CCDC144A-212ENST00000470068 HIVEP1P15822 2718 aa4.07□□□□□ -1.76
CCDC144A-212ENST00000470068 PCOTHQ58A44 107 aa4.06□□□□□ -1.76
CCDC144A-212ENST00000470068 COA5Q86WW8 74 aa4.06□□□□□ -1.76
CCDC144A-212ENST00000470068 FAM218AQ96MZ4 157 aa4.06□□□□□ -1.76
CCDC144A-212ENST00000470068 TM2D3Q9BRN9 247 aa4.06□□□□□ -1.76
CCDC144A-212ENST00000470068 LINC00588Q9Y4M8 146 aa4.06□□□□□ -1.76
CCDC144A-212ENST00000470068 IGLV8-61A0A075B6I0 122 aa4.05□□□□□ -1.76
CCDC144A-212ENST00000470068 CDC42SE1Q9NRR8 79 aa4.05□□□□□ -1.76
CCDC144A-212ENST00000470068 SPRR1BP22528 89 aa4.05□□□□□ -1.76
CCDC144A-212ENST00000470068 CRYBG3Q68DQ2 2970 aa4.05□□□□□ -1.76
CCDC144A-212ENST00000470068 Q5VSD8 79 aa4.05□□□□□ -1.76
CCDC144A-212ENST00000470068 A0A087X002 238 aa4.05□□□□□ -1.76
CCDC144A-212ENST00000470068 PRLHP81277 87 aa4.05□□□□□ -1.76
CCDC144A-212ENST00000470068 Q5XG85 94 aa4.05□□□□□ -1.76
CCDC144A-212ENST00000470068 CRIPTQ9P021 101 aa4.04□□□□□ -1.76
CCDC144A-212ENST00000470068 A0A096LNT2 108 aa4.04□□□□□ -1.76
CCDC144A-212ENST00000470068 PRR3P79522 188 aaKnown RBP4.04□□□□□ -1.76
CCDC144A-212ENST00000470068 PSPHP1O15172 72 aa4.04□□□□□ -1.76
CCDC144A-212ENST00000470068 MIR22HGQ0VDD5 57 aa4.03□□□□□ -1.76
CCDC144A-212ENST00000470068 ITPR2Q14571 2701 aa4.03□□□□□ -1.76
CCDC144A-212ENST00000470068 IGKV2D-30A0A075B6S6 120 aa4.03□□□□□ -1.77
CCDC144A-212ENST00000470068 IGKV2-30P06310 120 aa4.03□□□□□ -1.77
CCDC144A-212ENST00000470068 LINC00304Q8N9R0 145 aa4.02□□□□□ -1.77
CCDC144A-212ENST00000470068 IGFL1Q6UW32 110 aa4.02□□□□□ -1.77
CCDC144A-212ENST00000470068 H7BZZ5 65 aa4.02□□□□□ -1.77
CCDC144A-212ENST00000470068 KALRNO60229 2985 aa4.02□□□□□ -1.77
CCDC144A-212ENST00000470068 MAP1AP78559 2803 aaPredicted RBP4.02□□□□□ -1.77
CCDC144A-212ENST00000470068 PSORS1C2Q9UIG4 136 aa4.01□□□□□ -1.77
CCDC144A-212ENST00000470068 IGLV7-46A0A075B6I9 117 aa4.01□□□□□ -1.77
CCDC144A-212ENST00000470068 EIF4EBP3O60516 100 aaPredicted RBP4.01□□□□□ -1.77
CCDC144A-212ENST00000470068 K7EQZ3 153 aa4□□□□□ -1.77
CCDC144A-212ENST00000470068 IGLV7-43P04211 117 aa4□□□□□ -1.77
CCDC144A-212ENST00000470068 Q8N377 158 aa4□□□□□ -1.77
CCDC144A-212ENST00000470068 DSCAML1Q8TD84 2053 aa4□□□□□ -1.77
CCDC144A-212ENST00000470068 PRRC2CQ9Y520 2896 aaKnown RBP4□□□□□ -1.77
CCDC144A-212ENST00000470068 DNAH12Q6ZR08 3092 aa3.99□□□□□ -1.77
CCDC144A-212ENST00000470068 Q75L30 129 aa3.99□□□□□ -1.77
CCDC144A-212ENST00000470068 COL27A1Q8IZC6 1860 aaPredicted RBP3.98□□□□□ -1.77
CCDC144A-212ENST00000470068 A0A087WTM6 91 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms