RNA–Protein interactions for RNA: ENST00000469534.1

ITGA6-208, Transcript of integrin subunit alpha 6, humanhuman

TSL 2

Gene ITGA6, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-208ENST00000469534 M0QXV9 152 aa3.3□□□□□ -1.88
ITGA6-208ENST00000469534 TAX1BP3O14907 124 aa3.3□□□□□ -1.88
ITGA6-208ENST00000469534 TSPAN13O95857 204 aa3.3□□□□□ -1.88
ITGA6-208ENST00000469534 LINC00336Q6ZUF6 198 aa3.3□□□□□ -1.88
ITGA6-208ENST00000469534 KRTAP11-1Q8IUC1 163 aa3.3□□□□□ -1.88
ITGA6-208ENST00000469534 SPACA4Q8TDM5 124 aa3.3□□□□□ -1.88
ITGA6-208ENST00000469534 LINC00167Q96N53 147 aa3.3□□□□□ -1.88
ITGA6-208ENST00000469534 C22orf24Q9Y442 160 aa3.3□□□□□ -1.88
ITGA6-208ENST00000469534 DNAH11Q96DT5 4516 aa3.3□□□□□ -1.88
ITGA6-208ENST00000469534 A0A0B4J2C4 111 aa3.29□□□□□ -1.88
ITGA6-208ENST00000469534 A0A1B0GV90 55 aa3.29□□□□□ -1.88
ITGA6-208ENST00000469534 M0R378 163 aa3.29□□□□□ -1.88
ITGA6-208ENST00000469534 PSMB2P49721 201 aa3.29□□□□□ -1.88
ITGA6-208ENST00000469534 UBE2BP63146 152 aa3.29□□□□□ -1.88
ITGA6-208ENST00000469534 COL5A1-AS1Q5SY13 56 aa3.29□□□□□ -1.88
ITGA6-208ENST00000469534 Q8N9P0 234 aaPredicted RBP3.29□□□□□ -1.88
ITGA6-208ENST00000469534 SMIM11BQ8TCY0 68 aa3.29□□□□□ -1.88
ITGA6-208ENST00000469534 COPS9Q8WXC6 57 aa3.29□□□□□ -1.88
ITGA6-208ENST00000469534 PRO1854Q9UHT4 67 aa3.29□□□□□ -1.88
ITGA6-208ENST00000469534 KMT2CQ8NEZ4 4911 aaKnown RBP3.29□□□□□ -1.88
ITGA6-208ENST00000469534 LOC107984156A0A0G2JMH3 177 aa3.28□□□□□ -1.88
ITGA6-208ENST00000469534 A0A1B0GWB2 263 aa3.28□□□□□ -1.88
ITGA6-208ENST00000469534 TRIAP1O43715 76 aa3.28□□□□□ -1.88
ITGA6-208ENST00000469534 NDUFC2O95298 119 aa3.28□□□□□ -1.88
ITGA6-208ENST00000469534 SCXQ7RTU7 201 aa3.28□□□□□ -1.88
ITGA6-208ENST00000469534 MRPL55Q7Z7F7 128 aaKnown RBP3.28□□□□□ -1.88
ITGA6-208ENST00000469534 ARL17AQ8IVW1 177 aa3.28□□□□□ -1.88
ITGA6-208ENST00000469534 CLEC2BQ92478 149 aa3.28□□□□□ -1.88
ITGA6-208ENST00000469534 FAT2Q9NYQ8 4349 aa3.28□□□□□ -1.88
ITGA6-208ENST00000469534 DNAH5Q8TE73 4624 aa3.28□□□□□ -1.89
ITGA6-208ENST00000469534 TRAV23DV6A0A075B6W5 121 aa3.27□□□□□ -1.89
ITGA6-208ENST00000469534 TRAV13-2A0A0B4J235 113 aa3.27□□□□□ -1.89
ITGA6-208ENST00000469534 SMR3BP02814 79 aaPredicted RBP3.27□□□□□ -1.89
ITGA6-208ENST00000469534 SCGB1C2P0DMR2 95 aa3.27□□□□□ -1.89
ITGA6-208ENST00000469534 C6orf99Q4VX62 202 aa3.27□□□□□ -1.89
ITGA6-208ENST00000469534 CIRBP-AS1Q8TBR5 109 aa3.27□□□□□ -1.89
ITGA6-208ENST00000469534 RYR3Q15413 4870 aa3.27□□□□□ -1.89
ITGA6-208ENST00000469534 PKD1P98161 4303 aa3.27□□□□□ -1.89
ITGA6-208ENST00000469534 IGLV5-37A0A075B6J1 123 aa3.26□□□□□ -1.89
ITGA6-208ENST00000469534 TRBV10-2A0A0K0K1G8 114 aa3.26□□□□□ -1.89
ITGA6-208ENST00000469534 IGLV6-57P01721 117 aa3.26□□□□□ -1.89
ITGA6-208ENST00000469534 VAMP3Q15836 100 aa3.26□□□□□ -1.89
ITGA6-208ENST00000469534 MTURNQ8N3F0 131 aa3.26□□□□□ -1.89
ITGA6-208ENST00000469534 TMEM126AQ9H061 195 aa3.26□□□□□ -1.89
ITGA6-208ENST00000469534 PKIGQ9Y2B9 76 aa3.26□□□□□ -1.89
ITGA6-208ENST00000469534 HECTD4Q9Y4D8 3996 aa3.26□□□□□ -1.89
ITGA6-208ENST00000469534 IGLV1-50A0A075B6I6 118 aa3.25□□□□□ -1.89
ITGA6-208ENST00000469534 A0A1W2PPM0 123 aa3.25□□□□□ -1.89
ITGA6-208ENST00000469534 PRLHP81277 87 aa3.25□□□□□ -1.89
ITGA6-208ENST00000469534 FAM19A1Q7Z5A9 133 aa3.25□□□□□ -1.89
ITGA6-208ENST00000469534 DIRC1Q969H9 104 aa3.25□□□□□ -1.89
ITGA6-208ENST00000469534 FAM218AQ96MZ4 157 aa3.25□□□□□ -1.89
ITGA6-208ENST00000469534 PLAC8Q9NZF1 115 aa3.25□□□□□ -1.89
ITGA6-208ENST00000469534 LINC00474Q9P2X8 69 aa3.25□□□□□ -1.89
ITGA6-208ENST00000469534 DNAH8Q96JB1 4490 aa3.24□□□□□ -1.89
ITGA6-208ENST00000469534 DYNC1H1Q14204 4646 aaKnown RBP3.24□□□□□ -1.89
ITGA6-208ENST00000469534 ETDCA0A1B0GVM5 59 aa3.24□□□□□ -1.89
ITGA6-208ENST00000469534 PRYO14603 147 aa3.24□□□□□ -1.89
ITGA6-208ENST00000469534 ZNF73O43830 326 aaPredicted RBP3.24□□□□□ -1.89
ITGA6-208ENST00000469534 TCL1BO95988 128 aa3.24□□□□□ -1.89
ITGA6-208ENST00000469534 COX7BP24311 80 aa3.24□□□□□ -1.89
ITGA6-208ENST00000469534 LBHQ53QV2 105 aaPredicted RBP3.24□□□□□ -1.89
ITGA6-208ENST00000469534 C1orf137Q5JT78 98 aa3.24□□□□□ -1.89
ITGA6-208ENST00000469534 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.24□□□□□ -1.89
ITGA6-208ENST00000469534 REG3GQ6UW15 175 aa3.24□□□□□ -1.89
ITGA6-208ENST00000469534 Q6ZSA8 131 aa3.24□□□□□ -1.89
ITGA6-208ENST00000469534 PPDPFQ9H3Y8 114 aa3.24□□□□□ -1.89
ITGA6-208ENST00000469534 SPCS1Q9Y6A9 102 aa3.24□□□□□ -1.89
ITGA6-208ENST00000469534 A0A1B0GV72 72 aa3.23□□□□□ -1.89
ITGA6-208ENST00000469534 FABP2P12104 132 aa3.23□□□□□ -1.89
ITGA6-208ENST00000469534 RPL28P46779 137 aaKnown RBP3.23□□□□□ -1.89
ITGA6-208ENST00000469534 XGP55808 180 aa3.23□□□□□ -1.89
ITGA6-208ENST00000469534 PSORS1C2Q9UIG4 136 aa3.23□□□□□ -1.89
ITGA6-208ENST00000469534 ERC2-IT1O76042 136 aa3.22□□□□□ -1.89
ITGA6-208ENST00000469534 COX6CP09669 75 aa3.22□□□□□ -1.89
ITGA6-208ENST00000469534 UBE2AP49459 152 aa3.22□□□□□ -1.89
ITGA6-208ENST00000469534 KRTAP10-7P60409 375 aaPredicted RBP3.22□□□□□ -1.89
ITGA6-208ENST00000469534 ST20-AS1Q8NBB2 130 aa3.22□□□□□ -1.89
ITGA6-208ENST00000469534 DEFB105AQ8NG35 78 aa3.22□□□□□ -1.89
ITGA6-208ENST00000469534 HIGD2AQ9BW72 106 aa3.22□□□□□ -1.89
ITGA6-208ENST00000469534 KCNQ1DNQ9H478 68 aa3.22□□□□□ -1.89
ITGA6-208ENST00000469534 EPM2AB3EWF7 344 aa3.21□□□□□ -1.9
ITGA6-208ENST00000469534 C9JAW5 83 aa3.21□□□□□ -1.9
ITGA6-208ENST00000469534 H3BMG7 143 aa3.21□□□□□ -1.9
ITGA6-208ENST00000469534 K7EP34 96 aa3.21□□□□□ -1.9
ITGA6-208ENST00000469534 ELOF1P60002 83 aaKnown RBP3.21□□□□□ -1.9
ITGA6-208ENST00000469534 LINC00575Q6W349 94 aa3.21□□□□□ -1.9
ITGA6-208ENST00000469534 SMCR5Q8TEV8 140 aa3.21□□□□□ -1.9
ITGA6-208ENST00000469534 Q9BRP9 147 aa3.21□□□□□ -1.9
ITGA6-208ENST00000469534 LRP1BQ9NZR2 4599 aa3.2□□□□□ -1.9
ITGA6-208ENST00000469534 KRTAP4-16G5E9R7 235 aaPredicted RBP3.2□□□□□ -1.9
ITGA6-208ENST00000469534 BCE1O60756 84 aa3.2□□□□□ -1.9
ITGA6-208ENST00000469534 SPRR1AP35321 89 aa3.2□□□□□ -1.9
ITGA6-208ENST00000469534 RPL37AP61513 92 aaKnown RBP3.2□□□□□ -1.9
ITGA6-208ENST00000469534 ATXN8Q156A1 80 aa3.2□□□□□ -1.9
ITGA6-208ENST00000469534 Q6ZRX8 168 aa3.2□□□□□ -1.9
ITGA6-208ENST00000469534 hADV29S1A0JD25 119 aa3.19□□□□□ -1.9
ITGA6-208ENST00000469534 H0YGX0 51 aa3.19□□□□□ -1.9
ITGA6-208ENST00000469534 LST1O00453 97 aa3.19□□□□□ -1.9
ITGA6-208ENST00000469534 SLC25A20O43772 301 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms