RNA–Protein interactions for RNA: ENST00000468993.1

SMG5-202, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 345 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-202ENST00000468993 ATP5EP56381 51 aaPredicted RBP2.39□□□□□ -2.03
SMG5-202ENST00000468993 RBM3P98179 157 aaKnown RBP2.39□□□□□ -2.03
SMG5-202ENST00000468993 IQCJQ1A5X6 159 aa2.39□□□□□ -2.03
SMG5-202ENST00000468993 HEPN1Q6WQI6 88 aa2.39□□□□□ -2.03
SMG5-202ENST00000468993 UBE2L5PA0A1B0GUS4 154 aa2.38□□□□□ -2.03
SMG5-202ENST00000468993 JMJD7-PLA2G4BH0Y9G9 81 aa2.38□□□□□ -2.03
SMG5-202ENST00000468993 INE1O15225 51 aa2.38□□□□□ -2.03
SMG5-202ENST00000468993 SSSCA1O60232 199 aa2.38□□□□□ -2.03
SMG5-202ENST00000468993 PPYP01298 95 aa2.38□□□□□ -2.03
SMG5-202ENST00000468993 SMR3BP02814 79 aaPredicted RBP2.38□□□□□ -2.03
SMG5-202ENST00000468993 TFF1P04155 84 aa2.38□□□□□ -2.03
SMG5-202ENST00000468993 UBE2L3P68036 154 aaKnown RBP2.38□□□□□ -2.03
SMG5-202ENST00000468993 KRTAP13-3Q3SY46 172 aa2.38□□□□□ -2.03
SMG5-202ENST00000468993 PRO0461Q9UI25 63 aa2.38□□□□□ -2.03
SMG5-202ENST00000468993 LRP1Q07954 4544 aaKnown RBP2.38□□□□□ -2.03
SMG5-202ENST00000468993 DEFB131BA0A096LNP1 70 aa2.37□□□□□ -2.03
SMG5-202ENST00000468993 CPSF4LA6NMK7 179 aaKnown RBP2.37□□□□□ -2.03
SMG5-202ENST00000468993 J3QRE1 110 aa2.37□□□□□ -2.03
SMG5-202ENST00000468993 MRPS14O60783 128 aaKnown RBP2.37□□□□□ -2.03
SMG5-202ENST00000468993 IGKV4-1P06312 121 aa2.37□□□□□ -2.03
SMG5-202ENST00000468993 PDE6GP18545 87 aa2.37□□□□□ -2.03
SMG5-202ENST00000468993 ODF3Q96PU9 254 aa2.37□□□□□ -2.03
SMG5-202ENST00000468993 LIMD2Q9BT23 127 aa2.37□□□□□ -2.03
SMG5-202ENST00000468993 WFDC10AQ9H1F0 79 aa2.37□□□□□ -2.03
SMG5-202ENST00000468993 TMEM14CQ9P0S9 112 aa2.37□□□□□ -2.03
SMG5-202ENST00000468993 AP4S1Q9Y587 144 aa2.37□□□□□ -2.03
SMG5-202ENST00000468993 V9GYS6 101 aa2.37□□□□□ -2.03
SMG5-202ENST00000468993 IGKV3-7A0A075B6H7 116 aa2.36□□□□□ -2.03
SMG5-202ENST00000468993 TRBV10-3A0A0K0K1G6 114 aa2.36□□□□□ -2.03
SMG5-202ENST00000468993 G3V318 75 aa2.36□□□□□ -2.03
SMG5-202ENST00000468993 DEFB114Q30KQ6 69 aa2.36□□□□□ -2.03
SMG5-202ENST00000468993 IFI27L1Q96BM0 104 aa2.36□□□□□ -2.03
SMG5-202ENST00000468993 Q9H521 79 aa2.36□□□□□ -2.03
SMG5-202ENST00000468993 MED9Q9NWA0 146 aa2.36□□□□□ -2.03
SMG5-202ENST00000468993 MRPL35Q9NZE8 188 aaKnown RBP2.36□□□□□ -2.03
SMG5-202ENST00000468993 FAT3Q8TDW7 4589 aa2.35□□□□□ -2.03
SMG5-202ENST00000468993 TRGV2A0A075B6R0 118 aa2.35□□□□□ -2.03
SMG5-202ENST00000468993 NBDYA0A0U1RRE5 68 aa2.35□□□□□ -2.03
SMG5-202ENST00000468993 IGLV3-1P01715 115 aa2.35□□□□□ -2.03
SMG5-202ENST00000468993 PLGLAQ15195 96 aa2.35□□□□□ -2.03
SMG5-202ENST00000468993 SPTSSBQ8NFR3 76 aa2.35□□□□□ -2.03
SMG5-202ENST00000468993 USMG5Q96IX5 58 aa2.35□□□□□ -2.03
SMG5-202ENST00000468993 NEBP20929 6669 aa2.35□□□□□ -2.03
SMG5-202ENST00000468993 LOC110117498A0A087WWA1 95 aa2.34□□□□□ -2.03
SMG5-202ENST00000468993 TRAV12-3A0A0B4J271 114 aa2.34□□□□□ -2.03
SMG5-202ENST00000468993 RBAKDNA6NC62 111 aa2.34□□□□□ -2.03
SMG5-202ENST00000468993 H3BUA1 57 aa2.34□□□□□ -2.03
SMG5-202ENST00000468993 CYB5AP00167 134 aa2.34□□□□□ -2.03
SMG5-202ENST00000468993 CCKP06307 115 aa2.34□□□□□ -2.03
SMG5-202ENST00000468993 KRTAP10-8P60410 259 aa2.34□□□□□ -2.03
SMG5-202ENST00000468993 Q8N6K4 173 aa2.34□□□□□ -2.03
SMG5-202ENST00000468993 SNURFQ9Y675 71 aa2.34□□□□□ -2.03
SMG5-202ENST00000468993 GPR98Q8WXG9 6306 aa2.33□□□□□ -2.04
SMG5-202ENST00000468993 TNXBP22105 4242 aa2.33□□□□□ -2.04
SMG5-202ENST00000468993 TRAV13-2A0A0B4J235 113 aa2.33□□□□□ -2.04
SMG5-202ENST00000468993 DEFB4AO15263 64 aa2.33□□□□□ -2.04
SMG5-202ENST00000468993 DNAL4O96015 105 aa2.33□□□□□ -2.04
SMG5-202ENST00000468993 CCL18P55774 89 aa2.33□□□□□ -2.04
SMG5-202ENST00000468993 HIGD1CA8MV81 97 aa2.32□□□□□ -2.04
SMG5-202ENST00000468993 HCG22E2RYF7 251 aa2.32□□□□□ -2.04
SMG5-202ENST00000468993 SNCAP37840 140 aa2.32□□□□□ -2.04
SMG5-202ENST00000468993 KRTAP10-1P60331 282 aa2.32□□□□□ -2.04
SMG5-202ENST00000468993 KRTAP13-4Q3LI77 160 aa2.32□□□□□ -2.04
SMG5-202ENST00000468993 C9orf62Q8N4C0 152 aa2.32□□□□□ -2.04
SMG5-202ENST00000468993 CYP4F30PQ9H0H9 118 aa2.32□□□□□ -2.04
SMG5-202ENST00000468993 SIX6O95475 246 aa2.31□□□□□ -2.04
SMG5-202ENST00000468993 MT-ATP8P03928 68 aa2.31□□□□□ -2.04
SMG5-202ENST00000468993 SPART-AS1P0CW21 52 aa2.31□□□□□ -2.04
SMG5-202ENST00000468993 ZNF818PQ6ZRF7 136 aa2.31□□□□□ -2.04
SMG5-202ENST00000468993 TRAV23DV6A0A075B6W5 121 aa2.3□□□□□ -2.04
SMG5-202ENST00000468993 SPATA45Q537H7 98 aa2.3□□□□□ -2.04
SMG5-202ENST00000468993 LEAP2Q969E1 77 aa2.3□□□□□ -2.04
SMG5-202ENST00000468993 ZNF625Q96I27 306 aaPredicted RBP2.3□□□□□ -2.04
SMG5-202ENST00000468993 VAMP8Q9BV40 100 aa2.3□□□□□ -2.04
SMG5-202ENST00000468993 SYNE2Q8WXH0 6885 aaKnown RBP2.3□□□□□ -2.04
SMG5-202ENST00000468993 TEX49A0A1B0GTD5 131 aa2.29□□□□□ -2.04
SMG5-202ENST00000468993 FAM223BA6NKX1 122 aa2.29□□□□□ -2.04
SMG5-202ENST00000468993 FAM223AQ8IWN6 122 aa2.29□□□□□ -2.04
SMG5-202ENST00000468993 AMELYQ99218 206 aa2.29□□□□□ -2.04
SMG5-202ENST00000468993 TMEM14BQ9NUH8 114 aa2.29□□□□□ -2.04
SMG5-202ENST00000468993 SCP2D1Q9UJQ7 156 aa2.29□□□□□ -2.04
SMG5-202ENST00000468993 NDUFA3O95167 84 aa2.28□□□□□ -2.04
SMG5-202ENST00000468993 HTN3P15516 51 aa2.28□□□□□ -2.04
SMG5-202ENST00000468993 UBE2D1P51668 147 aa2.28□□□□□ -2.04
SMG5-202ENST00000468993 FXYD3Q14802 87 aa2.28□□□□□ -2.04
SMG5-202ENST00000468993 GDF5OSQ5U4N7 250 aa2.28□□□□□ -2.04
SMG5-202ENST00000468993 CYP2G1PQ6ZSU1 146 aa2.28□□□□□ -2.04
SMG5-202ENST00000468993 FAM103A1Q9BTL3 118 aaKnown RBP2.28□□□□□ -2.04
SMG5-202ENST00000468993 RPS27P42677 84 aaKnown RBP2.27□□□□□ -2.05
SMG5-202ENST00000468993 ZNF137PP52743 207 aa2.27□□□□□ -2.05
SMG5-202ENST00000468993 Q0VG73 95 aa2.27□□□□□ -2.05
SMG5-202ENST00000468993 UNQ6190/PRO20217Q6UXQ8 127 aa2.27□□□□□ -2.05
SMG5-202ENST00000468993 CYSTM1Q9H1C7 97 aa2.27□□□□□ -2.05
SMG5-202ENST00000468993 LINC00474Q9P2X8 69 aa2.27□□□□□ -2.05
SMG5-202ENST00000468993 GNGT2O14610 69 aa2.26□□□□□ -2.05
SMG5-202ENST00000468993 IGLC1P0CG04 106 aa2.26□□□□□ -2.05
SMG5-202ENST00000468993 KRTDAPP60985 99 aa2.26□□□□□ -2.05
SMG5-202ENST00000468993 RPL37AP61513 92 aaKnown RBP2.26□□□□□ -2.05
SMG5-202ENST00000468993 TRBV7-1A0A0A6YYK4 115 aa2.25□□□□□ -2.05
SMG5-202ENST00000468993 LOC101927531A0A1B0GV80 90 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms