RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 CREBBPQ92793 2442 aa3.26□□□□□ -1.89
SF3B1-207ENST00000468925 LRBAP50851 2863 aa3.26□□□□□ -1.89
SF3B1-207ENST00000468925 ATMQ13315 3056 aa3.25□□□□□ -1.89
SF3B1-207ENST00000468925 UTP20O75691 2785 aaKnown RBP3.25□□□□□ -1.89
SF3B1-207ENST00000468925 PTPRQQ9UMZ3 2332 aa3.25□□□□□ -1.89
SF3B1-207ENST00000468925 LRRK2Q5S007 2527 aa3.25□□□□□ -1.89
SF3B1-207ENST00000468925 IGLV5-52A0A0A0MRZ9 124 aa3.25□□□□□ -1.89
SF3B1-207ENST00000468925 A0A0J9YWU9 116 aa3.25□□□□□ -1.89
SF3B1-207ENST00000468925 INAFM1C9JVW0 142 aa3.25□□□□□ -1.89
SF3B1-207ENST00000468925 WFDC10AQ9H1F0 79 aa3.25□□□□□ -1.89
SF3B1-207ENST00000468925 LINC01558Q9Y6Z2 57 aa3.25□□□□□ -1.89
SF3B1-207ENST00000468925 APC2O95996 2303 aa3.25□□□□□ -1.89
SF3B1-207ENST00000468925 IGLV5-48A0A075B6I7 105 aa3.24□□□□□ -1.89
SF3B1-207ENST00000468925 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.24□□□□□ -1.89
SF3B1-207ENST00000468925 TRGV1A0A0A0MS02 117 aa3.24□□□□□ -1.89
SF3B1-207ENST00000468925 A6NDX4 124 aa3.24□□□□□ -1.89
SF3B1-207ENST00000468925 C3orf84H3BNL1 204 aa3.24□□□□□ -1.89
SF3B1-207ENST00000468925 IGKV3-20P01619 116 aa3.24□□□□□ -1.89
SF3B1-207ENST00000468925 IGKV2-30P06310 120 aa3.24□□□□□ -1.89
SF3B1-207ENST00000468925 PRB3Q04118 309 aaPredicted RBP3.24□□□□□ -1.89
SF3B1-207ENST00000468925 SMIM29Q86T20 159 aa3.24□□□□□ -1.89
SF3B1-207ENST00000468925 C16orf74Q96GX8 76 aa3.24□□□□□ -1.89
SF3B1-207ENST00000468925 PRR15LQ9BU68 103 aa3.24□□□□□ -1.89
SF3B1-207ENST00000468925 ACACAQ13085 2346 aa3.24□□□□□ -1.89
SF3B1-207ENST00000468925 IGLV4-60A0A075B6I1 120 aa3.23□□□□□ -1.89
SF3B1-207ENST00000468925 A0A1W2PNU3 283 aaPredicted RBP3.23□□□□□ -1.89
SF3B1-207ENST00000468925 HTN1P15515 57 aa3.23□□□□□ -1.89
SF3B1-207ENST00000468925 DEFB131AP59861 70 aa3.23□□□□□ -1.89
SF3B1-207ENST00000468925 LINC01554Q52M75 96 aa3.23□□□□□ -1.89
SF3B1-207ENST00000468925 C10orf25Q5T742 122 aa3.23□□□□□ -1.89
SF3B1-207ENST00000468925 C11orf71Q6IPW1 123 aa3.23□□□□□ -1.89
SF3B1-207ENST00000468925 LINC01006Q8NI28 216 aa3.23□□□□□ -1.89
SF3B1-207ENST00000468925 ITPR2Q14571 2701 aa3.23□□□□□ -1.89
SF3B1-207ENST00000468925 DOPEY2Q9Y3R5 2298 aa3.23□□□□□ -1.89
SF3B1-207ENST00000468925 MGAQ8IWI9 3026 aa3.22□□□□□ -1.89
SF3B1-207ENST00000468925 NBPF19A0A087WUL8 3843 aa3.22□□□□□ -1.89
SF3B1-207ENST00000468925 TRGV4A0A0C4DH28 118 aa3.22□□□□□ -1.89
SF3B1-207ENST00000468925 LYNX1G3V0Z9 82 aa3.22□□□□□ -1.89
SF3B1-207ENST00000468925 LYNX1P0DP58 116 aa3.22□□□□□ -1.89
SF3B1-207ENST00000468925 CNBPP62633 177 aaKnown RBP3.22□□□□□ -1.89
SF3B1-207ENST00000468925 SCXQ7RTU7 201 aa3.22□□□□□ -1.89
SF3B1-207ENST00000468925 SPRR4Q96PI1 79 aa3.22□□□□□ -1.89
SF3B1-207ENST00000468925 DHRS4-AS1Q9P1J3 65 aa3.22□□□□□ -1.89
SF3B1-207ENST00000468925 CENPEQ02224 2701 aa3.22□□□□□ -1.89
SF3B1-207ENST00000468925 ZFHX3Q15911 3703 aa3.22□□□□□ -1.89
SF3B1-207ENST00000468925 TLN1Q9Y490 2541 aaKnown RBP3.22□□□□□ -1.89
SF3B1-207ENST00000468925 IGLV7-46A0A075B6I9 117 aa3.21□□□□□ -1.9
SF3B1-207ENST00000468925 IGLV5-37A0A075B6J1 123 aa3.21□□□□□ -1.9
SF3B1-207ENST00000468925 J3QKU1 62 aa3.21□□□□□ -1.9
SF3B1-207ENST00000468925 M0R2N4 97 aa3.21□□□□□ -1.9
SF3B1-207ENST00000468925 SPAG11BQ08648 103 aa3.21□□□□□ -1.9
SF3B1-207ENST00000468925 DEFB109BQ30KR1 87 aa3.21□□□□□ -1.9
SF3B1-207ENST00000468925 USP9YO00507 2555 aaPredicted RBP3.2□□□□□ -1.9
SF3B1-207ENST00000468925 CELSR1Q9NYQ6 3014 aa3.2□□□□□ -1.9
SF3B1-207ENST00000468925 LRCOL1A6NCL2 159 aa3.2□□□□□ -1.9
SF3B1-207ENST00000468925 H3BUX3 64 aa3.2□□□□□ -1.9
SF3B1-207ENST00000468925 KPRPQ5T749 579 aaPredicted RBP3.2□□□□□ -1.9
SF3B1-207ENST00000468925 Q8NBF4 154 aa3.2□□□□□ -1.9
SF3B1-207ENST00000468925 PLAC8Q9NZF1 115 aa3.2□□□□□ -1.9
SF3B1-207ENST00000468925 SDK1Q7Z5N4 2213 aa3.2□□□□□ -1.9
SF3B1-207ENST00000468925 OTOGQ6ZRI0 2925 aa3.19□□□□□ -1.9
SF3B1-207ENST00000468925 DSCR9P59020 149 aa3.19□□□□□ -1.9
SF3B1-207ENST00000468925 MOBPQ13875 183 aa3.19□□□□□ -1.9
SF3B1-207ENST00000468925 RETNLBQ9BQ08 111 aa3.19□□□□□ -1.9
SF3B1-207ENST00000468925 TP53AIP1Q9HCN2 124 aa3.19□□□□□ -1.9
SF3B1-207ENST00000468925 BOD1L1Q8NFC6 3051 aa3.18□□□□□ -1.9
SF3B1-207ENST00000468925 MTORP42345 2549 aa3.18□□□□□ -1.9
SF3B1-207ENST00000468925 IGKV3OR2-268A0A0C4DH90 116 aa3.18□□□□□ -1.9
SF3B1-207ENST00000468925 RPL37AP8A6NKH3 93 aa3.18□□□□□ -1.9
SF3B1-207ENST00000468925 PRR3P79522 188 aaKnown RBP3.18□□□□□ -1.9
SF3B1-207ENST00000468925 LINC00612Q8N6U2 182 aa3.18□□□□□ -1.9
SF3B1-207ENST00000468925 COL6A6A6NMZ7 2263 aa3.18□□□□□ -1.9
SF3B1-207ENST00000468925 PDZD2O15018 2839 aa3.17□□□□□ -1.9
SF3B1-207ENST00000468925 SPTBN1Q01082 2364 aaKnown RBP3.17□□□□□ -1.9
SF3B1-207ENST00000468925 ADGRG4Q8IZF6 3080 aa3.17□□□□□ -1.9
SF3B1-207ENST00000468925 SPG11Q96JI7 2443 aa3.17□□□□□ -1.9
SF3B1-207ENST00000468925 EGFEM1PQ0D2K5 195 aa3.17□□□□□ -1.9
SF3B1-207ENST00000468925 COA5Q86WW8 74 aa3.17□□□□□ -1.9
SF3B1-207ENST00000468925 Q8N9L7 120 aa3.17□□□□□ -1.9
SF3B1-207ENST00000468925 C9orf163Q8N9P6 203 aa3.17□□□□□ -1.9
SF3B1-207ENST00000468925 CHCHD10Q8WYQ3 142 aaPredicted RBP3.17□□□□□ -1.9
SF3B1-207ENST00000468925 PCNX1Q96RV3 2341 aa3.17□□□□□ -1.9
SF3B1-207ENST00000468925 PKDREJQ9NTG1 2253 aa3.17□□□□□ -1.9
SF3B1-207ENST00000468925 ROS1P08922 2347 aa3.16□□□□□ -1.9
SF3B1-207ENST00000468925 MED13LQ71F56 2210 aa3.16□□□□□ -1.9
SF3B1-207ENST00000468925 SPENQ96T58 3664 aaKnown RBP3.16□□□□□ -1.9
SF3B1-207ENST00000468925 IGKV2D-24A0A075B6R9 120 aa3.16□□□□□ -1.9
SF3B1-207ENST00000468925 H0Y9P7 68 aa3.16□□□□□ -1.9
SF3B1-207ENST00000468925 DSCR10P59022 87 aa3.16□□□□□ -1.9
SF3B1-207ENST00000468925 C1orf137Q5JT78 98 aa3.16□□□□□ -1.9
SF3B1-207ENST00000468925 NOP10Q9NPE3 64 aaKnown RBP3.16□□□□□ -1.9
SF3B1-207ENST00000468925 F8P00451 2351 aa3.15□□□□□ -1.9
SF3B1-207ENST00000468925 DEFB131BA0A096LNP1 70 aa3.15□□□□□ -1.91
SF3B1-207ENST00000468925 LINC00313P59037 77 aa3.15□□□□□ -1.91
SF3B1-207ENST00000468925 REG3AQ06141 175 aa3.15□□□□□ -1.91
SF3B1-207ENST00000468925 CRYBG3Q68DQ2 2970 aa3.15□□□□□ -1.91
SF3B1-207ENST00000468925 Q8NAQ8 132 aa3.15□□□□□ -1.91
SF3B1-207ENST00000468925 C4orf3Q8WVX3 66 aa3.15□□□□□ -1.91
SF3B1-207ENST00000468925 KRTAP1-5Q9BYS1 174 aa3.15□□□□□ -1.91
SF3B1-207ENST00000468925 PRO0255Q9UI72 69 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms