RNA–Protein interactions for RNA: ENST00000468380.1

LINC00888-201, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 1,241 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-201ENST00000468380 H7C2G1 150 aa9.78□□□□□ -0.84
LINC00888-201ENST00000468380 C1orf195Q5TG92 126 aa9.78□□□□□ -0.84
LINC00888-201ENST00000468380 TMEM218A2RU14 115 aa9.77□□□□□ -0.85
LINC00888-201ENST00000468380 EIF4EBP3O60516 100 aaPredicted RBP9.76□□□□□ -0.85
LINC00888-201ENST00000468380 IFI27L1Q96BM0 104 aa9.76□□□□□ -0.85
LINC00888-201ENST00000468380 NDUFC2O95298 119 aa9.75□□□□□ -0.85
LINC00888-201ENST00000468380 CD164Q04900 197 aa9.75□□□□□ -0.85
LINC00888-201ENST00000468380 KRTAP3-3Q9BYR6 98 aa9.75□□□□□ -0.85
LINC00888-201ENST00000468380 KRTAP3-2Q9BYR7 98 aa9.75□□□□□ -0.85
LINC00888-201ENST00000468380 TRAPPC1Q9Y5R8 145 aa9.75□□□□□ -0.85
LINC00888-201ENST00000468380 LAMTOR3Q9UHA4 124 aa9.74□□□□□ -0.85
LINC00888-201ENST00000468380 Q5XG85 94 aa9.73□□□□□ -0.85
LINC00888-201ENST00000468380 SLC25A34Q6PIV7 304 aa9.73□□□□□ -0.85
LINC00888-201ENST00000468380 Q6Q795 121 aa9.73□□□□□ -0.85
LINC00888-201ENST00000468380 SOSTDC1Q6X4U4 206 aa9.73□□□□□ -0.85
LINC00888-201ENST00000468380 CFC1P0CG37 223 aa9.71□□□□□ -0.86
LINC00888-201ENST00000468380 LEPROTO15243 131 aa9.7□□□□□ -0.86
LINC00888-201ENST00000468380 MIEN1Q9BRT3 115 aa9.7□□□□□ -0.86
LINC00888-201ENST00000468380 A0A0G2JQZ4 141 aa9.69□□□□□ -0.86
LINC00888-201ENST00000468380 NPC2P61916 151 aa9.69□□□□□ -0.86
LINC00888-201ENST00000468380 Q1RN00 199 aa9.69□□□□□ -0.86
LINC00888-201ENST00000468380 PRO1933Q9H354 126 aa9.69□□□□□ -0.86
LINC00888-201ENST00000468380 HINT1P49773 126 aaPredicted RBP9.68□□□□□ -0.86
LINC00888-201ENST00000468380 CLLU1Q5K131 121 aa9.67□□□□□ -0.86
LINC00888-201ENST00000468380 ADAMTSL4-AS1Q5T5F5 129 aa9.67□□□□□ -0.86
LINC00888-201ENST00000468380 UQCC3Q6UW78 93 aa9.67□□□□□ -0.86
LINC00888-201ENST00000468380 SMIM29Q86T20 159 aa9.67□□□□□ -0.86
LINC00888-201ENST00000468380 KRTAP19-1Q8IUB9 90 aa9.67□□□□□ -0.86
LINC00888-201ENST00000468380 J3QQQ9 107 aa9.66□□□□□ -0.86
LINC00888-201ENST00000468380 DHRS4-AS1Q9P1J3 65 aa9.66□□□□□ -0.86
LINC00888-201ENST00000468380 IFITM2Q01629 132 aa9.65□□□□□ -0.86
LINC00888-201ENST00000468380 COMMD7Q86VX2 200 aa9.65□□□□□ -0.86
LINC00888-201ENST00000468380 DEFB105AQ8NG35 78 aa9.65□□□□□ -0.86
LINC00888-201ENST00000468380 CHCHD1Q96BP2 118 aaKnown RBP9.64□□□□□ -0.87
LINC00888-201ENST00000468380 H0Y8G0 127 aa9.63□□□□□ -0.87
LINC00888-201ENST00000468380 AKR1D1P51857 326 aa9.63□□□□□ -0.87
LINC00888-201ENST00000468380 TAL2Q16559 108 aa9.63□□□□□ -0.87
LINC00888-201ENST00000468380 RHEBQ15382 184 aa9.61□□□□□ -0.87
LINC00888-201ENST00000468380 SYNE2Q8WXH0 6885 aaKnown RBP9.61□□□□□ -0.87
LINC00888-201ENST00000468380 LCE2BO14633 110 aa9.6□□□□□ -0.87
LINC00888-201ENST00000468380 NMUP48645 174 aa9.6□□□□□ -0.87
LINC00888-201ENST00000468380 TEX49A0A1B0GTD5 131 aa9.59□□□□□ -0.87
LINC00888-201ENST00000468380 C10orf91Q5T1B1 145 aa9.59□□□□□ -0.87
LINC00888-201ENST00000468380 OR13C6PQ8NH95 151 aa9.59□□□□□ -0.87
LINC00888-201ENST00000468380 CBY1Q9Y3M2 126 aa9.59□□□□□ -0.87
LINC00888-201ENST00000468380 A0A0J9YXY3 114 aa9.58□□□□□ -0.88
LINC00888-201ENST00000468380 LGALS3P17931 250 aaKnown RBP9.58□□□□□ -0.88
LINC00888-201ENST00000468380 ELOF1P60002 83 aaKnown RBP9.58□□□□□ -0.88
LINC00888-201ENST00000468380 MT2AP02795 61 aa9.56□□□□□ -0.88
LINC00888-201ENST00000468380 COX7BP24311 80 aa9.56□□□□□ -0.88
LINC00888-201ENST00000468380 MACF1Q9UPN3 7388 aaKnown RBP9.56□□□□□ -0.88
LINC00888-201ENST00000468380 PLNP26678 52 aa9.54□□□□□ -0.88
LINC00888-201ENST00000468380 C6orf99Q4VX62 202 aa9.54□□□□□ -0.88
LINC00888-201ENST00000468380 ATP11AUNQ6ZP68 121 aa9.54□□□□□ -0.88
LINC00888-201ENST00000468380 PMCHL2Q9BQD1 86 aa9.54□□□□□ -0.88
LINC00888-201ENST00000468380 SPANXCQ9NY87 97 aa9.53□□□□□ -0.88
LINC00888-201ENST00000468380 HSBP1O75506 76 aa9.52□□□□□ -0.89
LINC00888-201ENST00000468380 HERVK_113P61574 105 aa9.52□□□□□ -0.89
LINC00888-201ENST00000468380 LINC00308Q8TCZ7 52 aa9.52□□□□□ -0.89
LINC00888-201ENST00000468380 LITAFQ99732 161 aa9.52□□□□□ -0.89
LINC00888-201ENST00000468380 DPM2O94777 84 aa9.51□□□□□ -0.89
LINC00888-201ENST00000468380 TCL1BO95988 128 aa9.51□□□□□ -0.89
LINC00888-201ENST00000468380 Q75L30 129 aa9.51□□□□□ -0.89
LINC00888-201ENST00000468380 IGLV5-48A0A075B6I7 105 aa9.5□□□□□ -0.89
LINC00888-201ENST00000468380 C20orf202A1L168 122 aa9.5□□□□□ -0.89
LINC00888-201ENST00000468380 SPANXDQ9BXN6 97 aa9.5□□□□□ -0.89
LINC00888-201ENST00000468380 KRTAP9-3Q9BYQ3 159 aa9.5□□□□□ -0.89
LINC00888-201ENST00000468380 MT1FP04733 61 aa9.49□□□□□ -0.89
LINC00888-201ENST00000468380 OBSCN-AS1Q96MR7 158 aa9.49□□□□□ -0.89
LINC00888-201ENST00000468380 LEPROTL1O95214 131 aa9.48□□□□□ -0.89
LINC00888-201ENST00000468380 IGKCP01834 107 aa9.48□□□□□ -0.89
LINC00888-201ENST00000468380 PCP2Q8IVA1 136 aa9.48□□□□□ -0.89
LINC00888-201ENST00000468380 LINC00310P59036 64 aa9.45□□□□□ -0.9
LINC00888-201ENST00000468380 YPEL4Q96NS1 127 aa9.45□□□□□ -0.9
LINC00888-201ENST00000468380 E9PLD3 99 aa9.44□□□□□ -0.9
LINC00888-201ENST00000468380 TRBV7-6A0A0J9YX20 115 aa9.43□□□□□ -0.9
LINC00888-201ENST00000468380 FABP4P15090 132 aa9.42□□□□□ -0.9
LINC00888-201ENST00000468380 TIMM17BO60830 172 aa9.4□□□□□ -0.9
LINC00888-201ENST00000468380 SERF1AO75920 110 aa9.4□□□□□ -0.9
LINC00888-201ENST00000468380 LINC00518Q8N0U6 118 aa9.4□□□□□ -0.9
LINC00888-201ENST00000468380 A0A1B0GWB2 263 aa9.39□□□□□ -0.91
LINC00888-201ENST00000468380 KRTAP10-10P60014 251 aa9.38□□□□□ -0.91
LINC00888-201ENST00000468380 HSPB8Q9UJY1 196 aa9.38□□□□□ -0.91
LINC00888-201ENST00000468380 APOC3P02656 99 aa9.37□□□□□ -0.91
LINC00888-201ENST00000468380 Q96NJ1 140 aa9.36□□□□□ -0.91
LINC00888-201ENST00000468380 TRBV20-1A0A075B6N2 111 aa9.35□□□□□ -0.91
LINC00888-201ENST00000468380 TRBV7-7A0A0K0K1E9 115 aa9.34□□□□□ -0.91
LINC00888-201ENST00000468380 TTTY13Q9BZ97 58 aa9.33□□□□□ -0.92
LINC00888-201ENST00000468380 SNAPINO95295 136 aa9.32□□□□□ -0.92
LINC00888-201ENST00000468380 TRGC2P03986 189 aa9.32□□□□□ -0.92
LINC00888-201ENST00000468380 KRTAP19-6Q3LI70 58 aa9.32□□□□□ -0.92
LINC00888-201ENST00000468380 C20orf166-AS1Q96NR2 134 aa9.32□□□□□ -0.92
LINC00888-201ENST00000468380 ZNF815PA8K554 130 aa9.3□□□□□ -0.92
LINC00888-201ENST00000468380 A8MUU9 505 aa9.3□□□□□ -0.92
LINC00888-201ENST00000468380 IGFL1Q6UW32 110 aa9.3□□□□□ -0.92
LINC00888-201ENST00000468380 SVBPQ8N300 66 aa9.29□□□□□ -0.92
LINC00888-201ENST00000468380 A6NDN8 102 aa9.28□□□□□ -0.92
LINC00888-201ENST00000468380 F8WEM9 126 aa9.28□□□□□ -0.92
LINC00888-201ENST00000468380 A4D1N5 150 aa9.27□□□□□ -0.93
LINC00888-201ENST00000468380 KRTAP16-1A8MUX0 517 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms