RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 C3orf79P0CE67 100 aa6.58□□□□□ -1.36
COL4A6-205ENST00000468338 LGALS3P17931 250 aaKnown RBP6.58□□□□□ -1.36
COL4A6-205ENST00000468338 FAM19A1Q7Z5A9 133 aa6.58□□□□□ -1.36
COL4A6-205ENST00000468338 KCNQ1DNQ9H478 68 aa6.58□□□□□ -1.36
COL4A6-205ENST00000468338 A0A0J9YXY3 114 aa6.57□□□□□ -1.36
COL4A6-205ENST00000468338 TRBV10-2A0A0K0K1G8 114 aa6.57□□□□□ -1.36
COL4A6-205ENST00000468338 KRTAP4-16G5E9R7 235 aaPredicted RBP6.57□□□□□ -1.36
COL4A6-205ENST00000468338 CRYGAP11844 174 aa6.57□□□□□ -1.36
COL4A6-205ENST00000468338 FAM229BQ4G0N7 80 aa6.57□□□□□ -1.36
COL4A6-205ENST00000468338 DAND5Q8N907 189 aa6.57□□□□□ -1.36
COL4A6-205ENST00000468338 KRTAP9-2Q9BYQ4 174 aa6.57□□□□□ -1.36
COL4A6-205ENST00000468338 LINC00337Q8N6G1 96 aa6.56□□□□□ -1.36
COL4A6-205ENST00000468338 TRBV10-3A0A0K0K1G6 114 aa6.55□□□□□ -1.36
COL4A6-205ENST00000468338 NCR3O14931 201 aa6.55□□□□□ -1.36
COL4A6-205ENST00000468338 NDUFC2O95298 119 aa6.55□□□□□ -1.36
COL4A6-205ENST00000468338 KRTAP13-2Q52LG2 175 aa6.55□□□□□ -1.36
COL4A6-205ENST00000468338 ADAMTSL4-AS1Q5T5F5 129 aa6.55□□□□□ -1.36
COL4A6-205ENST00000468338 SOSTDC1Q6X4U4 206 aa6.55□□□□□ -1.36
COL4A6-205ENST00000468338 ANAPC11Q9NYG5 84 aa6.55□□□□□ -1.36
COL4A6-205ENST00000468338 S100A1P23297 94 aa6.54□□□□□ -1.36
COL4A6-205ENST00000468338 LITAFQ99732 161 aa6.54□□□□□ -1.36
COL4A6-205ENST00000468338 TIMM17BO60830 172 aa6.53□□□□□ -1.36
COL4A6-205ENST00000468338 SPANXB1Q9NS25 103 aaPredicted RBP6.53□□□□□ -1.36
COL4A6-205ENST00000468338 IGLV6-57P01721 117 aa6.52□□□□□ -1.37
COL4A6-205ENST00000468338 KRTDAPP60985 99 aa6.52□□□□□ -1.37
COL4A6-205ENST00000468338 TYMSOSQ8TAI1 123 aa6.52□□□□□ -1.37
COL4A6-205ENST00000468338 MIEN1Q9BRT3 115 aa6.52□□□□□ -1.37
COL4A6-205ENST00000468338 HIGD2AQ9BW72 106 aa6.52□□□□□ -1.37
COL4A6-205ENST00000468338 DDTP30046 118 aa6.51□□□□□ -1.37
COL4A6-205ENST00000468338 SPRR4Q96PI1 79 aa6.51□□□□□ -1.37
COL4A6-205ENST00000468338 LPAP08519 4548 aa6.5□□□□□ -1.37
COL4A6-205ENST00000468338 SMCR5Q8TEV8 140 aa6.5□□□□□ -1.37
COL4A6-205ENST00000468338 TTTY13Q9BZ97 58 aa6.5□□□□□ -1.37
COL4A6-205ENST00000468338 ETDCA0A1B0GVM5 59 aa6.49□□□□□ -1.37
COL4A6-205ENST00000468338 C20orf202A1L168 122 aa6.49□□□□□ -1.37
COL4A6-205ENST00000468338 ZNF815PA8K554 130 aa6.49□□□□□ -1.37
COL4A6-205ENST00000468338 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.49□□□□□ -1.37
COL4A6-205ENST00000468338 CTAG1AP78358 180 aa6.49□□□□□ -1.37
COL4A6-205ENST00000468338 S100A12P80511 92 aa6.49□□□□□ -1.37
COL4A6-205ENST00000468338 LCE3BQ5TA77 95 aa6.49□□□□□ -1.37
COL4A6-205ENST00000468338 LINC00308Q8TCZ7 52 aa6.49□□□□□ -1.37
COL4A6-205ENST00000468338 AKR1D1P51857 326 aa6.48□□□□□ -1.37
COL4A6-205ENST00000468338 HIST3H2BBQ8N257 126 aa6.48□□□□□ -1.37
COL4A6-205ENST00000468338 KRTAP9-4Q9BYQ2 154 aa6.48□□□□□ -1.37
COL4A6-205ENST00000468338 SPANXCQ9NY87 97 aa6.48□□□□□ -1.37
COL4A6-205ENST00000468338 NPC2P61916 151 aa6.47□□□□□ -1.37
COL4A6-205ENST00000468338 S100A7L2Q5SY68 101 aa6.47□□□□□ -1.37
COL4A6-205ENST00000468338 Q6ZRX8 168 aa6.47□□□□□ -1.37
COL4A6-205ENST00000468338 HIST1H2BLQ99880 126 aa6.47□□□□□ -1.37
COL4A6-205ENST00000468338 Q9BRP9 147 aa6.47□□□□□ -1.37
COL4A6-205ENST00000468338 ZNF706Q9Y5V0 76 aaPredicted RBP6.47□□□□□ -1.37
COL4A6-205ENST00000468338 TSPAN13O95857 204 aa6.46□□□□□ -1.38
COL4A6-205ENST00000468338 LINC00483Q53H64 154 aa6.46□□□□□ -1.38
COL4A6-205ENST00000468338 C3orf22Q8N5N4 141 aa6.46□□□□□ -1.38
COL4A6-205ENST00000468338 LINC00304Q8N9R0 145 aa6.46□□□□□ -1.38
COL4A6-205ENST00000468338 PPDPFQ9H3Y8 114 aa6.46□□□□□ -1.38
COL4A6-205ENST00000468338 TRAV23DV6A0A075B6W5 121 aa6.45□□□□□ -1.38
COL4A6-205ENST00000468338 ERC2-IT1O76042 136 aa6.45□□□□□ -1.38
COL4A6-205ENST00000468338 ATOH7Q8N100 152 aa6.45□□□□□ -1.38
COL4A6-205ENST00000468338 SPANXDQ9BXN6 97 aa6.45□□□□□ -1.38
COL4A6-205ENST00000468338 IGLV9-49A0A0B4J1Y8 123 aa6.44□□□□□ -1.38
COL4A6-205ENST00000468338 ZNF73O43830 326 aaPredicted RBP6.44□□□□□ -1.38
COL4A6-205ENST00000468338 Q6ZVH6 145 aa6.43□□□□□ -1.38
COL4A6-205ENST00000468338 PCP2Q8IVA1 136 aa6.43□□□□□ -1.38
COL4A6-205ENST00000468338 LINC00518Q8N0U6 118 aa6.43□□□□□ -1.38
COL4A6-205ENST00000468338 CBY1Q9Y3M2 126 aa6.43□□□□□ -1.38
COL4A6-205ENST00000468338 RNF213Q63HN8 5207 aa6.43□□□□□ -1.38
COL4A6-205ENST00000468338 IFITM1P13164 125 aa6.42□□□□□ -1.38
COL4A6-205ENST00000468338 S100A2P29034 98 aa6.42□□□□□ -1.38
COL4A6-205ENST00000468338 JOSD1Q15040 202 aaPredicted RBP6.42□□□□□ -1.38
COL4A6-205ENST00000468338 PRR4Q16378 134 aa6.42□□□□□ -1.38
COL4A6-205ENST00000468338 SPAG11AQ6PDA7 123 aa6.42□□□□□ -1.38
COL4A6-205ENST00000468338 SCGB1D4Q6XE38 83 aa6.42□□□□□ -1.38
COL4A6-205ENST00000468338 KRTAP9-9Q9BYP9 154 aa6.41□□□□□ -1.38
COL4A6-205ENST00000468338 KRTAP9-3Q9BYQ3 159 aa6.41□□□□□ -1.38
COL4A6-205ENST00000468338 S100A6P06703 90 aa6.4□□□□□ -1.38
COL4A6-205ENST00000468338 IGKV2-30P06310 120 aa6.39□□□□□ -1.39
COL4A6-205ENST00000468338 OR13C6PQ8NH95 151 aa6.39□□□□□ -1.39
COL4A6-205ENST00000468338 COPS9Q8WXC6 57 aa6.39□□□□□ -1.39
COL4A6-205ENST00000468338 HINT1P49773 126 aaPredicted RBP6.38□□□□□ -1.39
COL4A6-205ENST00000468338 SSBP3-AS1Q7Z2R9 100 aa6.38□□□□□ -1.39
COL4A6-205ENST00000468338 MUSTN1Q8IVN3 82 aa6.38□□□□□ -1.39
COL4A6-205ENST00000468338 Q8NBF4 154 aa6.38□□□□□ -1.39
COL4A6-205ENST00000468338 SPRR1BP22528 89 aa6.37□□□□□ -1.39
COL4A6-205ENST00000468338 TRBV7-6A0A0J9YX20 115 aa6.36□□□□□ -1.39
COL4A6-205ENST00000468338 ELOF1P60002 83 aaKnown RBP6.36□□□□□ -1.39
COL4A6-205ENST00000468338 C6orf99Q4VX62 202 aa6.36□□□□□ -1.39
COL4A6-205ENST00000468338 ST20-AS1Q8NBB2 130 aa6.36□□□□□ -1.39
COL4A6-205ENST00000468338 RETNLBQ9BQ08 111 aa6.36□□□□□ -1.39
COL4A6-205ENST00000468338 DHRS4-AS1Q9P1J3 65 aa6.36□□□□□ -1.39
COL4A6-205ENST00000468338 HSBP1L1C9JCN9 74 aa6.35□□□□□ -1.39
COL4A6-205ENST00000468338 SPINK1P00995 79 aa6.35□□□□□ -1.39
COL4A6-205ENST00000468338 COX7BP24311 80 aa6.34□□□□□ -1.39
COL4A6-205ENST00000468338 RPS29P62273 56 aaKnown RBP6.34□□□□□ -1.39
COL4A6-205ENST00000468338 MOBPQ13875 183 aa6.34□□□□□ -1.39
COL4A6-205ENST00000468338 TPRXLQ17RH7 258 aa6.33□□□□□ -1.4
COL4A6-205ENST00000468338 IGLV7-46A0A075B6I9 117 aa6.32□□□□□ -1.4
COL4A6-205ENST00000468338 TRAV13-2A0A0B4J235 113 aa6.32□□□□□ -1.4
COL4A6-205ENST00000468338 A0A1B0GWB2 263 aa6.32□□□□□ -1.4
COL4A6-205ENST00000468338 A6NDN8 102 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms