RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 SNURFQ9Y675 71 aa9.27□□□□□ -0.93
BRAT1-203ENST00000467558 KIAA0087Q14695 138 aa9.27□□□□□ -0.93
BRAT1-203ENST00000467558 CIRBP-AS1Q8TBR5 109 aa9.25□□□□□ -0.93
BRAT1-203ENST00000467558 CR1P17927 2039 aa9.25□□□□□ -0.93
BRAT1-203ENST00000467558 C5orf47Q569G3 176 aa9.25□□□□□ -0.93
BRAT1-203ENST00000467558 Q6ZRP5 223 aa9.25□□□□□ -0.93
BRAT1-203ENST00000467558 NBEAL2Q6ZNJ1 2754 aa9.25□□□□□ -0.93
BRAT1-203ENST00000467558 DCHS2Q6V1P9 2916 aa9.25□□□□□ -0.93
BRAT1-203ENST00000467558 C16orf90A8MZG2 172 aa9.25□□□□□ -0.93
BRAT1-203ENST00000467558 SPATA3Q8NHX4 192 aa9.25□□□□□ -0.93
BRAT1-203ENST00000467558 LINC01547P58512 204 aaPredicted RBP9.24□□□□□ -0.93
BRAT1-203ENST00000467558 VPREB1P12018 145 aa9.24□□□□□ -0.93
BRAT1-203ENST00000467558 ATP5EP56381 51 aaPredicted RBP9.24□□□□□ -0.93
BRAT1-203ENST00000467558 TRBV7-7A0A0K0K1E9 115 aa9.23□□□□□ -0.93
BRAT1-203ENST00000467558 EIF4EBP3O60516 100 aaPredicted RBP9.23□□□□□ -0.93
BRAT1-203ENST00000467558 Q6ZRX8 168 aa9.23□□□□□ -0.93
BRAT1-203ENST00000467558 STAB1Q9NY15 2570 aa9.23□□□□□ -0.93
BRAT1-203ENST00000467558 FAM30AQ9NZY2 134 aa9.23□□□□□ -0.93
BRAT1-203ENST00000467558 IGLV6-57P01721 117 aa9.22□□□□□ -0.93
BRAT1-203ENST00000467558 COL6A5A8TX70 2615 aa9.22□□□□□ -0.93
BRAT1-203ENST00000467558 NOTCH1P46531 2555 aa9.22□□□□□ -0.93
BRAT1-203ENST00000467558 CXCL6P80162 114 aa9.21□□□□□ -0.93
BRAT1-203ENST00000467558 TM2D3Q9BRN9 247 aa9.21□□□□□ -0.93
BRAT1-203ENST00000467558 CASC2Q6XLA1 102 aa9.2□□□□□ -0.94
BRAT1-203ENST00000467558 A0A1B0GW54 56 aa9.19□□□□□ -0.94
BRAT1-203ENST00000467558 PHF5AQ7RTV0 110 aaKnown RBP9.18□□□□□ -0.94
BRAT1-203ENST00000467558 APCP25054 2843 aa9.17□□□□□ -0.94
BRAT1-203ENST00000467558 C15orf56Q8N910 161 aa9.17□□□□□ -0.94
BRAT1-203ENST00000467558 CELSR2Q9HCU4 2923 aa9.17□□□□□ -0.94
BRAT1-203ENST00000467558 RTL8CO15255 209 aa9.17□□□□□ -0.94
BRAT1-203ENST00000467558 SVIPQ8NHG7 77 aa9.17□□□□□ -0.94
BRAT1-203ENST00000467558 WWC2-AS2Q96NR7 200 aa9.17□□□□□ -0.94
BRAT1-203ENST00000467558 LOC110117498A0A087WWA1 95 aa9.16□□□□□ -0.94
BRAT1-203ENST00000467558 IGHV6-1A0A0B4J1U7 121 aa9.16□□□□□ -0.94
BRAT1-203ENST00000467558 DEFB116Q30KQ4 102 aa9.16□□□□□ -0.94
BRAT1-203ENST00000467558 Q6ZQT0 140 aa9.16□□□□□ -0.94
BRAT1-203ENST00000467558 WIPF1O43516 503 aa9.15□□□□□ -0.94
BRAT1-203ENST00000467558 NF1P21359 2839 aa9.15□□□□□ -0.94
BRAT1-203ENST00000467558 LINC00208Q96KT6 92 aa9.15□□□□□ -0.94
BRAT1-203ENST00000467558 Q8N9L7 120 aa9.15□□□□□ -0.95
BRAT1-203ENST00000467558 CHTF8P0CG12 524 aa9.14□□□□□ -0.95
BRAT1-203ENST00000467558 Q8NBF4 154 aa9.14□□□□□ -0.95
BRAT1-203ENST00000467558 KCNQ1DNQ9H478 68 aa9.13□□□□□ -0.95
BRAT1-203ENST00000467558 PRR4Q16378 134 aa9.13□□□□□ -0.95
BRAT1-203ENST00000467558 EPM2AB3EWF7 344 aa9.13□□□□□ -0.95
BRAT1-203ENST00000467558 SERTAD4-AS1Q5TG53 156 aa9.13□□□□□ -0.95
BRAT1-203ENST00000467558 SEC61GP60059 68 aa9.13□□□□□ -0.95
BRAT1-203ENST00000467558 HCG22E2RYF7 251 aa9.12□□□□□ -0.95
BRAT1-203ENST00000467558 FAM168BA1KXE4 195 aa9.11□□□□□ -0.95
BRAT1-203ENST00000467558 MPLKIPQ8TAP9 179 aa9.11□□□□□ -0.95
BRAT1-203ENST00000467558 ST20-AS1Q8NBB2 130 aa9.11□□□□□ -0.95
BRAT1-203ENST00000467558 LINC00476Q8WZB0 136 aa9.11□□□□□ -0.95
BRAT1-203ENST00000467558 IGLV1-50A0A075B6I6 118 aa9.11□□□□□ -0.95
BRAT1-203ENST00000467558 LINC00528Q8N1L1 170 aa9.1□□□□□ -0.95
BRAT1-203ENST00000467558 BCE1O60756 84 aa9.09□□□□□ -0.95
BRAT1-203ENST00000467558 TMEM254Q8TBM7 123 aa9.09□□□□□ -0.95
BRAT1-203ENST00000467558 MOBPQ13875 183 aa9.09□□□□□ -0.95
BRAT1-203ENST00000467558 TLX1NBP0CAT3 122 aa9.08□□□□□ -0.96
BRAT1-203ENST00000467558 LIMD2Q9BT23 127 aa9.08□□□□□ -0.96
BRAT1-203ENST00000467558 NBEAL1Q6ZS30 2694 aa9.08□□□□□ -0.96
BRAT1-203ENST00000467558 V9GYY9 64 aa9.08□□□□□ -0.96
BRAT1-203ENST00000467558 FBN2P35556 2912 aa9.07□□□□□ -0.96
BRAT1-203ENST00000467558 SMG1Q96Q15 3661 aaKnown RBP9.07□□□□□ -0.96
BRAT1-203ENST00000467558 C9orf129Q5T035 196 aaKnown RBP9.06□□□□□ -0.96
BRAT1-203ENST00000467558 FAM104AQ969W3 186 aa9.05□□□□□ -0.96
BRAT1-203ENST00000467558 C9orf163Q8N9P6 203 aa9.04□□□□□ -0.96
BRAT1-203ENST00000467558 H0Y9P7 68 aa9.04□□□□□ -0.96
BRAT1-203ENST00000467558 PLA2G2DQ9UNK4 145 aa9.04□□□□□ -0.96
BRAT1-203ENST00000467558 BRK1Q8WUW1 75 aa9.04□□□□□ -0.96
BRAT1-203ENST00000467558 APLNQ9ULZ1 77 aa9.03□□□□□ -0.96
BRAT1-203ENST00000467558 TRBV7-4A0A0J9YYF1 115 aa9.03□□□□□ -0.96
BRAT1-203ENST00000467558 SMIM26A0A096LP01 95 aa9.02□□□□□ -0.97
BRAT1-203ENST00000467558 SERP1Q9Y6X1 66 aa9.02□□□□□ -0.97
BRAT1-203ENST00000467558 SMIM29Q86T20 159 aa9.02□□□□□ -0.97
BRAT1-203ENST00000467558 BAHCC1Q9P281 2608 aa9.02□□□□□ -0.97
BRAT1-203ENST00000467558 CRYGAP11844 174 aa9□□□□□ -0.97
BRAT1-203ENST00000467558 MXRA5Q9NR99 2828 aa9□□□□□ -0.97
BRAT1-203ENST00000467558 A0A087WTM6 91 aa9□□□□□ -0.97
BRAT1-203ENST00000467558 CASC10Q5T4H9 136 aa8.99□□□□□ -0.97
BRAT1-203ENST00000467558 HIVEP1P15822 2718 aa8.99□□□□□ -0.97
BRAT1-203ENST00000467558 CNBPP62633 177 aaKnown RBP8.98□□□□□ -0.97
BRAT1-203ENST00000467558 hDV103S1A0JD37 113 aa8.97□□□□□ -0.97
BRAT1-203ENST00000467558 PCOTHQ58A44 107 aa8.97□□□□□ -0.97
BRAT1-203ENST00000467558 PRR15LQ9BU68 103 aa8.97□□□□□ -0.97
BRAT1-203ENST00000467558 TP53AIP1Q9HCN2 124 aa8.96□□□□□ -0.97
BRAT1-203ENST00000467558 Q8N377 158 aa8.96□□□□□ -0.98
BRAT1-203ENST00000467558 SPACA4Q8TDM5 124 aa8.96□□□□□ -0.98
BRAT1-203ENST00000467558 C1orf64Q8NEQ6 169 aa8.95□□□□□ -0.98
BRAT1-203ENST00000467558 NSD1Q96L73 2696 aaPredicted RBP8.95□□□□□ -0.98
BRAT1-203ENST00000467558 RETNLBQ9BQ08 111 aa8.92□□□□□ -0.98
BRAT1-203ENST00000467558 CELSR1Q9NYQ6 3014 aa8.92□□□□□ -0.98
BRAT1-203ENST00000467558 SPTSSBQ8NFR3 76 aa8.91□□□□□ -0.98
BRAT1-203ENST00000467558 NIPBLQ6KC79 2804 aaeCLIP8.91□□□□□ -0.98
BRAT1-203ENST00000467558 A0A1W2PNN7 141 aa8.91□□□□□ -0.98
BRAT1-203ENST00000467558 TYMSOSQ8TAI1 123 aa8.91□□□□□ -0.98
BRAT1-203ENST00000467558 ZNF861PO60384 105 aa8.91□□□□□ -0.98
BRAT1-203ENST00000467558 IGFL1Q6UW32 110 aa8.9□□□□□ -0.98
BRAT1-203ENST00000467558 CSMD1Q96PZ7 3565 aa8.9□□□□□ -0.98
BRAT1-203ENST00000467558 FAM229AH3BQW9 127 aa8.9□□□□□ -0.98
BRAT1-203ENST00000467558 IGLV5-37A0A075B6J1 123 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms