RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 KRTAP4-16G5E9R7 235 aaPredicted RBP9.31□□□□□ -0.92
NPHP4-205ENST00000466897 A6NDN8 102 aa9.3□□□□□ -0.92
NPHP4-205ENST00000466897 H0Y9J4 135 aa9.3□□□□□ -0.92
NPHP4-205ENST00000466897 KRTAP13-1Q8IUC0 172 aa9.3□□□□□ -0.92
NPHP4-205ENST00000466897 SRRM2Q9UQ35 2752 aaKnown RBP9.29□□□□□ -0.92
NPHP4-205ENST00000466897 CFC1BP0CG36 223 aa9.29□□□□□ -0.92
NPHP4-205ENST00000466897 CFC1P0CG37 223 aa9.29□□□□□ -0.92
NPHP4-205ENST00000466897 FXYD2P54710 66 aa9.29□□□□□ -0.92
NPHP4-205ENST00000466897 ZNF73O43830 326 aaPredicted RBP9.28□□□□□ -0.92
NPHP4-205ENST00000466897 ZNF861PO60384 105 aa9.28□□□□□ -0.92
NPHP4-205ENST00000466897 RPL28P46779 137 aaKnown RBP9.28□□□□□ -0.92
NPHP4-205ENST00000466897 SPINK6Q6UWN8 80 aa9.28□□□□□ -0.92
NPHP4-205ENST00000466897 ABCA13Q86UQ4 5058 aa9.27□□□□□ -0.93
NPHP4-205ENST00000466897 ETDCA0A1B0GVM5 59 aa9.26□□□□□ -0.93
NPHP4-205ENST00000466897 A0A1B0GWB2 263 aa9.26□□□□□ -0.93
NPHP4-205ENST00000466897 M0R143 59 aa9.26□□□□□ -0.93
NPHP4-205ENST00000466897 FAM19A1Q7Z5A9 133 aa9.26□□□□□ -0.93
NPHP4-205ENST00000466897 DIRC1Q969H9 104 aa9.26□□□□□ -0.93
NPHP4-205ENST00000466897 RAB37Q96AX2 223 aa9.26□□□□□ -0.93
NPHP4-205ENST00000466897 TRBV7-6A0A0J9YX20 115 aa9.25□□□□□ -0.93
NPHP4-205ENST00000466897 RPL13AP40429 203 aaKnown RBP9.25□□□□□ -0.93
NPHP4-205ENST00000466897 UBE2AP49459 152 aa9.25□□□□□ -0.93
NPHP4-205ENST00000466897 CTAG1AP78358 180 aa9.25□□□□□ -0.93
NPHP4-205ENST00000466897 B5MCH6 92 aa9.24□□□□□ -0.93
NPHP4-205ENST00000466897 HINT1P49773 126 aaPredicted RBP9.24□□□□□ -0.93
NPHP4-205ENST00000466897 BVES-AS1Q5T3Y7 98 aa9.24□□□□□ -0.93
NPHP4-205ENST00000466897 Q6ZRX8 168 aa9.24□□□□□ -0.93
NPHP4-205ENST00000466897 SMIM11BQ8TCY0 68 aa9.24□□□□□ -0.93
NPHP4-205ENST00000466897 PRLHP81277 87 aa9.23□□□□□ -0.93
NPHP4-205ENST00000466897 C6orf99Q4VX62 202 aa9.23□□□□□ -0.93
NPHP4-205ENST00000466897 NHP2Q9NX24 153 aaKnown RBP9.23□□□□□ -0.93
NPHP4-205ENST00000466897 PRO1854Q9UHT4 67 aa9.23□□□□□ -0.93
NPHP4-205ENST00000466897 PKHD1L1Q86WI1 4243 aa9.23□□□□□ -0.93
NPHP4-205ENST00000466897 ELOF1P60002 83 aaKnown RBP9.21□□□□□ -0.94
NPHP4-205ENST00000466897 INAFM2P0DMQ5 153 aa9.2□□□□□ -0.94
NPHP4-205ENST00000466897 COX7BP24311 80 aa9.19□□□□□ -0.94
NPHP4-205ENST00000466897 SMCR5Q8TEV8 140 aa9.18□□□□□ -0.94
NPHP4-205ENST00000466897 Q9BRP9 147 aa9.18□□□□□ -0.94
NPHP4-205ENST00000466897 VAMP3Q15836 100 aa9.17□□□□□ -0.94
NPHP4-205ENST00000466897 HIGD2AQ9BW72 106 aa9.17□□□□□ -0.94
NPHP4-205ENST00000466897 DHRS4-AS1Q9P1J3 65 aa9.17□□□□□ -0.94
NPHP4-205ENST00000466897 K7ERJ3 54 aa9.16□□□□□ -0.94
NPHP4-205ENST00000466897 H7C2G1 150 aa9.15□□□□□ -0.94
NPHP4-205ENST00000466897 Q1RN00 199 aa9.14□□□□□ -0.95
NPHP4-205ENST00000466897 ZNF706Q9Y5V0 76 aaPredicted RBP9.13□□□□□ -0.95
NPHP4-205ENST00000466897 TSPAN13O95857 204 aa9.12□□□□□ -0.95
NPHP4-205ENST00000466897 KRTAP1-4P0C5Y4 121 aa9.12□□□□□ -0.95
NPHP4-205ENST00000466897 H0YGX0 51 aa9.11□□□□□ -0.95
NPHP4-205ENST00000466897 ERC2-IT1O76042 136 aa9.11□□□□□ -0.95
NPHP4-205ENST00000466897 LINC00575Q6W349 94 aa9.11□□□□□ -0.95
NPHP4-205ENST00000466897 TRIAP1O43715 76 aa9.1□□□□□ -0.95
NPHP4-205ENST00000466897 OXTP01178 125 aa9.1□□□□□ -0.95
NPHP4-205ENST00000466897 SPRR4Q96PI1 79 aa9.1□□□□□ -0.95
NPHP4-205ENST00000466897 SLC25A20O43772 301 aa9.09□□□□□ -0.95
NPHP4-205ENST00000466897 LINC01600Q96MT4 127 aa9.09□□□□□ -0.95
NPHP4-205ENST00000466897 FLG2Q5D862 2391 aaPredicted RBP9.09□□□□□ -0.95
NPHP4-205ENST00000466897 KRTAP29-1A8MX34 341 aaPredicted RBP9.08□□□□□ -0.96
NPHP4-205ENST00000466897 COX6CP09669 75 aa9.08□□□□□ -0.96
NPHP4-205ENST00000466897 BATFQ16520 125 aa9.08□□□□□ -0.96
NPHP4-205ENST00000466897 FAM229BQ4G0N7 80 aa9.08□□□□□ -0.96
NPHP4-205ENST00000466897 LINC00483Q53H64 154 aa9.08□□□□□ -0.96
NPHP4-205ENST00000466897 A0A1B0GX51 115 aa9.07□□□□□ -0.96
NPHP4-205ENST00000466897 PSMB2P49721 201 aa9.07□□□□□ -0.96
NPHP4-205ENST00000466897 hADV29S1A0JD25 119 aa9.06□□□□□ -0.96
NPHP4-205ENST00000466897 SNHG12Q9BXW3 62 aa9.06□□□□□ -0.96
NPHP4-205ENST00000466897 MYCBP2O75592 4640 aa9.05□□□□□ -0.96
NPHP4-205ENST00000466897 SNCGO76070 127 aa9.05□□□□□ -0.96
NPHP4-205ENST00000466897 SPRR1BP22528 89 aa9.05□□□□□ -0.96
NPHP4-205ENST00000466897 IGLV5-48A0A075B6I7 105 aa9.04□□□□□ -0.96
NPHP4-205ENST00000466897 FAT3Q8TDW7 4589 aa9.04□□□□□ -0.96
NPHP4-205ENST00000466897 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.03□□□□□ -0.96
NPHP4-205ENST00000466897 ST20-AS1Q8NBB2 130 aa9.03□□□□□ -0.96
NPHP4-205ENST00000466897 LRP1Q07954 4544 aaKnown RBP9.03□□□□□ -0.96
NPHP4-205ENST00000466897 PCP4L1A6NKN8 68 aa9.02□□□□□ -0.97
NPHP4-205ENST00000466897 CRYGAP11844 174 aa9.02□□□□□ -0.97
NPHP4-205ENST00000466897 FAM218AQ96MZ4 157 aa9.02□□□□□ -0.97
NPHP4-205ENST00000466897 A0A087X002 238 aa9.01□□□□□ -0.97
NPHP4-205ENST00000466897 GAGE2AQ6NT46 116 aa9.01□□□□□ -0.97
NPHP4-205ENST00000466897 TEX49A0A1B0GTD5 131 aa9□□□□□ -0.97
NPHP4-205ENST00000466897 TAX1BP3O14907 124 aa9□□□□□ -0.97
NPHP4-205ENST00000466897 LINC01547P58512 204 aaPredicted RBP9□□□□□ -0.97
NPHP4-205ENST00000466897 KRTAP10-8P60410 259 aa9□□□□□ -0.97
NPHP4-205ENST00000466897 Q6ZQY7 126 aa9□□□□□ -0.97
NPHP4-205ENST00000466897 PPDPFLQ8WWR9 84 aa9□□□□□ -0.97
NPHP4-205ENST00000466897 MT1HL1P0DM35 61 aa8.99□□□□□ -0.97
NPHP4-205ENST00000466897 OCIAD2Q56VL3 154 aa8.99□□□□□ -0.97
NPHP4-205ENST00000466897 COL5A1-AS1Q5SY13 56 aa8.99□□□□□ -0.97
NPHP4-205ENST00000466897 LYRM7Q5U5X0 104 aa8.99□□□□□ -0.97
NPHP4-205ENST00000466897 PRR26Q8N8Z3 221 aa8.99□□□□□ -0.97
NPHP4-205ENST00000466897 CLEC2BQ92478 149 aa8.99□□□□□ -0.97
NPHP4-205ENST00000466897 ANAPC11Q9NYG5 84 aa8.99□□□□□ -0.97
NPHP4-205ENST00000466897 C9orf118A6NHY6 69 aa8.98□□□□□ -0.97
NPHP4-205ENST00000466897 SCGB1C2P0DMR2 95 aa8.98□□□□□ -0.97
NPHP4-205ENST00000466897 LST1O00453 97 aa8.97□□□□□ -0.97
NPHP4-205ENST00000466897 GHRHP01286 108 aa8.97□□□□□ -0.97
NPHP4-205ENST00000466897 KRTAP13-2Q52LG2 175 aa8.97□□□□□ -0.97
NPHP4-205ENST00000466897 H3BUT2 72 aa8.96□□□□□ -0.98
NPHP4-205ENST00000466897 TRACP01848 142 aa8.96□□□□□ -0.98
NPHP4-205ENST00000466897 Q8N377 158 aa8.96□□□□□ -0.98
NPHP4-205ENST00000466897 DNAL4O96015 105 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms