RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 HINT1P49773 126 aaPredicted RBP6.85□□□□□ -1.31
VCP-204ENST00000466100 RPL37AP61513 92 aaKnown RBP6.85□□□□□ -1.31
VCP-204ENST00000466100 Q8N1X5 172 aa6.85□□□□□ -1.31
VCP-204ENST00000466100 OR13C6PQ8NH95 151 aa6.85□□□□□ -1.31
VCP-204ENST00000466100 MYCBP2O75592 4640 aa6.85□□□□□ -1.31
VCP-204ENST00000466100 A6NDN8 102 aa6.84□□□□□ -1.31
VCP-204ENST00000466100 K7ERJ3 54 aa6.84□□□□□ -1.31
VCP-204ENST00000466100 RPL13AP40429 203 aaKnown RBP6.84□□□□□ -1.31
VCP-204ENST00000466100 Q5VSD8 79 aa6.84□□□□□ -1.31
VCP-204ENST00000466100 REG3GQ6UW15 175 aa6.84□□□□□ -1.31
VCP-204ENST00000466100 NHP2Q9NX24 153 aaKnown RBP6.84□□□□□ -1.31
VCP-204ENST00000466100 BCE1O60756 84 aa6.83□□□□□ -1.32
VCP-204ENST00000466100 C1orf137Q5JT78 98 aa6.83□□□□□ -1.32
VCP-204ENST00000466100 KRTAP13-1Q8IUC0 172 aa6.83□□□□□ -1.32
VCP-204ENST00000466100 LRP1Q07954 4544 aaKnown RBP6.82□□□□□ -1.32
VCP-204ENST00000466100 ZNF73O43830 326 aaPredicted RBP6.82□□□□□ -1.32
VCP-204ENST00000466100 SMIM11BQ8TCY0 68 aa6.82□□□□□ -1.32
VCP-204ENST00000466100 RAB37Q96AX2 223 aa6.82□□□□□ -1.32
VCP-204ENST00000466100 PRO1854Q9UHT4 67 aa6.82□□□□□ -1.32
VCP-204ENST00000466100 CBY1Q9Y3M2 126 aa6.82□□□□□ -1.32
VCP-204ENST00000466100 FAM229AH3BQW9 127 aa6.81□□□□□ -1.32
VCP-204ENST00000466100 IGLV7-43P04211 117 aa6.81□□□□□ -1.32
VCP-204ENST00000466100 B5MCH6 92 aa6.8□□□□□ -1.32
VCP-204ENST00000466100 PLA2G1BP04054 148 aaKnown RBP6.8□□□□□ -1.32
VCP-204ENST00000466100 RPL28P46779 137 aaKnown RBP6.8□□□□□ -1.32
VCP-204ENST00000466100 C6orf99Q4VX62 202 aa6.8□□□□□ -1.32
VCP-204ENST00000466100 DIRC1Q969H9 104 aa6.8□□□□□ -1.32
VCP-204ENST00000466100 H0Y9J4 135 aa6.79□□□□□ -1.32
VCP-204ENST00000466100 FAM19A1Q7Z5A9 133 aa6.79□□□□□ -1.32
VCP-204ENST00000466100 TRBV7-6A0A0J9YX20 115 aa6.78□□□□□ -1.32
VCP-204ENST00000466100 ETDCA0A1B0GVM5 59 aa6.78□□□□□ -1.32
VCP-204ENST00000466100 PCP4L1A6NKN8 68 aa6.78□□□□□ -1.32
VCP-204ENST00000466100 ZNF861PO60384 105 aa6.78□□□□□ -1.32
VCP-204ENST00000466100 TSPAN13O95857 204 aa6.78□□□□□ -1.32
VCP-204ENST00000466100 ELOF1P60002 83 aaKnown RBP6.78□□□□□ -1.32
VCP-204ENST00000466100 PRLHP81277 87 aa6.78□□□□□ -1.32
VCP-204ENST00000466100 Q6ZRX8 168 aa6.78□□□□□ -1.32
VCP-204ENST00000466100 SNHG12Q9BXW3 62 aa6.78□□□□□ -1.32
VCP-204ENST00000466100 KRTAP4-5Q9BYR2 181 aa6.78□□□□□ -1.32
VCP-204ENST00000466100 H7C2G1 150 aa6.77□□□□□ -1.33
VCP-204ENST00000466100 BATFQ16520 125 aa6.77□□□□□ -1.33
VCP-204ENST00000466100 Q9BRP9 147 aa6.77□□□□□ -1.33
VCP-204ENST00000466100 KRTAP3-3Q9BYR6 98 aa6.77□□□□□ -1.33
VCP-204ENST00000466100 KRTAP3-2Q9BYR7 98 aa6.77□□□□□ -1.33
VCP-204ENST00000466100 FLG2Q5D862 2391 aaPredicted RBP6.76□□□□□ -1.33
VCP-204ENST00000466100 UBE2AP49459 152 aa6.76□□□□□ -1.33
VCP-204ENST00000466100 SMCR5Q8TEV8 140 aa6.76□□□□□ -1.33
VCP-204ENST00000466100 TRIAP1O43715 76 aa6.75□□□□□ -1.33
VCP-204ENST00000466100 COX7BP24311 80 aa6.75□□□□□ -1.33
VCP-204ENST00000466100 Q1RN00 199 aa6.75□□□□□ -1.33
VCP-204ENST00000466100 TNXBP22105 4242 aa6.74□□□□□ -1.33
VCP-204ENST00000466100 ERC2-IT1O76042 136 aa6.73□□□□□ -1.33
VCP-204ENST00000466100 SPINK6Q6UWN8 80 aa6.73□□□□□ -1.33
VCP-204ENST00000466100 TAX1BP3O14907 124 aa6.72□□□□□ -1.33
VCP-204ENST00000466100 HIGD2AQ9BW72 106 aa6.72□□□□□ -1.33
VCP-204ENST00000466100 INAFM2P0DMQ5 153 aa6.71□□□□□ -1.34
VCP-204ENST00000466100 VAMP3Q15836 100 aa6.71□□□□□ -1.34
VCP-204ENST00000466100 LINC00575Q6W349 94 aa6.71□□□□□ -1.34
VCP-204ENST00000466100 FAM218AQ96MZ4 157 aa6.71□□□□□ -1.34
VCP-204ENST00000466100 DHRS4-AS1Q9P1J3 65 aa6.71□□□□□ -1.34
VCP-204ENST00000466100 H0YGX0 51 aa6.7□□□□□ -1.34
VCP-204ENST00000466100 NAA38Q9BRA0 125 aaKnown RBP6.7□□□□□ -1.34
VCP-204ENST00000466100 PCLOQ9Y6V0 5065 aa6.69□□□□□ -1.34
VCP-204ENST00000466100 KRTAP1-4P0C5Y4 121 aa6.69□□□□□ -1.34
VCP-204ENST00000466100 PSMB2P49721 201 aa6.69□□□□□ -1.34
VCP-204ENST00000466100 COL5A1-AS1Q5SY13 56 aa6.69□□□□□ -1.34
VCP-204ENST00000466100 C9orf118A6NHY6 69 aa6.68□□□□□ -1.34
VCP-204ENST00000466100 CLEC2BQ92478 149 aa6.68□□□□□ -1.34
VCP-204ENST00000466100 hADV29S1A0JD25 119 aa6.67□□□□□ -1.34
VCP-204ENST00000466100 ST20-AS1Q8NBB2 130 aa6.67□□□□□ -1.34
VCP-204ENST00000466100 SPRR4Q96PI1 79 aa6.67□□□□□ -1.34
VCP-204ENST00000466100 H3BUT2 72 aa6.66□□□□□ -1.34
VCP-204ENST00000466100 COX6CP09669 75 aa6.66□□□□□ -1.34
VCP-204ENST00000466100 LINC01547P58512 204 aaPredicted RBP6.66□□□□□ -1.34
VCP-204ENST00000466100 IGLV5-48A0A075B6I7 105 aa6.65□□□□□ -1.34
VCP-204ENST00000466100 A0A1B0GX51 115 aa6.65□□□□□ -1.34
VCP-204ENST00000466100 LST1O00453 97 aa6.65□□□□□ -1.34
VCP-204ENST00000466100 SLC25A20O43772 301 aa6.65□□□□□ -1.34
VCP-204ENST00000466100 LINC00483Q53H64 154 aa6.65□□□□□ -1.34
VCP-204ENST00000466100 ZNF706Q9Y5V0 76 aaPredicted RBP6.65□□□□□ -1.34
VCP-204ENST00000466100 A0A1W2PPM0 123 aa6.64□□□□□ -1.35
VCP-204ENST00000466100 SPRR1BP22528 89 aa6.64□□□□□ -1.35
VCP-204ENST00000466100 Q6ZQY7 126 aa6.64□□□□□ -1.35
VCP-204ENST00000466100 TCL1BO95988 128 aa6.63□□□□□ -1.35
VCP-204ENST00000466100 SCGB1C2P0DMR2 95 aa6.63□□□□□ -1.35
VCP-204ENST00000466100 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.63□□□□□ -1.35
VCP-204ENST00000466100 ANAPC11Q9NYG5 84 aa6.63□□□□□ -1.35
VCP-204ENST00000466100 TRACP01848 142 aa6.62□□□□□ -1.35
VCP-204ENST00000466100 FAM229BQ4G0N7 80 aa6.62□□□□□ -1.35
VCP-204ENST00000466100 LYRM7Q5U5X0 104 aa6.62□□□□□ -1.35
VCP-204ENST00000466100 A0A087X002 238 aa6.61□□□□□ -1.35
VCP-204ENST00000466100 GAGE2AQ6NT46 116 aa6.61□□□□□ -1.35
VCP-204ENST00000466100 Q8N377 158 aa6.61□□□□□ -1.35
VCP-204ENST00000466100 LINC01600Q96MT4 127 aa6.61□□□□□ -1.35
VCP-204ENST00000466100 TRBV20-1A0A075B6N2 111 aa6.59□□□□□ -1.35
VCP-204ENST00000466100 TEX49A0A1B0GTD5 131 aa6.59□□□□□ -1.35
VCP-204ENST00000466100 SNCGO76070 127 aa6.59□□□□□ -1.35
VCP-204ENST00000466100 FABP2P12104 132 aa6.59□□□□□ -1.35
VCP-204ENST00000466100 ATXN8Q156A1 80 aa6.59□□□□□ -1.35
VCP-204ENST00000466100 KRTAP13-2Q52LG2 175 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms