RNA–Protein interactions for RNA: ENST00000465143.1

ITSN1-223, Transcript of intersectin 1, human

TSL 3

Gene ITSN1, Length 614 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITSN1-223	ENST00000465143	RPL37A	P61513	92 aa	Known RBP	4.86	□□□□□ -1.63
ITSN1-223	ENST00000465143	PRR3	P79522	188 aa	Known RBP	4.86	□□□□□ -1.63
ITSN1-223	ENST00000465143	COL5A1-AS1	Q5SY13	56 aa		4.86	□□□□□ -1.63
ITSN1-223	ENST00000465143	C9orf129	Q5T035	196 aa	Known RBP	4.86	□□□□□ -1.63
ITSN1-223	ENST00000465143		Q8NDZ9	215 aa		4.86	□□□□□ -1.63
ITSN1-223	ENST00000465143	RAB37	Q96AX2	223 aa		4.86	□□□□□ -1.63
ITSN1-223	ENST00000465143	LINC00474	Q9P2X8	69 aa		4.86	□□□□□ -1.63
ITSN1-223	ENST00000465143	IGKV2-28	A0A075B6P5	120 aa		4.85	□□□□□ -1.63
ITSN1-223	ENST00000465143		A0A087WYN8	130 aa		4.85	□□□□□ -1.63
ITSN1-223	ENST00000465143		A0A096LNI7	61 aa		4.85	□□□□□ -1.63
ITSN1-223	ENST00000465143		A0A0B4J2C4	111 aa		4.85	□□□□□ -1.63
ITSN1-223	ENST00000465143	NCR3	O14931	201 aa		4.85	□□□□□ -1.63
ITSN1-223	ENST00000465143	NDUFC2	O95298	119 aa		4.85	□□□□□ -1.63
ITSN1-223	ENST00000465143	IGKV2D-28	P01615	120 aa		4.85	□□□□□ -1.63
ITSN1-223	ENST00000465143	SPACA4	Q8TDM5	124 aa		4.85	□□□□□ -1.63
ITSN1-223	ENST00000465143	KRTAP3-1	Q9BYR8	98 aa		4.85	□□□□□ -1.63
ITSN1-223	ENST00000465143	TAX1BP3	O14907	124 aa		4.84	□□□□□ -1.63
ITSN1-223	ENST00000465143	VPREB1	P12018	145 aa		4.84	□□□□□ -1.63
ITSN1-223	ENST00000465143	RPL13A	P40429	203 aa	Known RBP	4.84	□□□□□ -1.63
ITSN1-223	ENST00000465143	C7orf33	Q8WU49	177 aa		4.84	□□□□□ -1.63
ITSN1-223	ENST00000465143	PRO1854	Q9UHT4	67 aa		4.84	□□□□□ -1.63
ITSN1-223	ENST00000465143	TRAV13-2	A0A0B4J235	113 aa		4.83	□□□□□ -1.64
ITSN1-223	ENST00000465143	FAM168B	A1KXE4	195 aa		4.83	□□□□□ -1.64
ITSN1-223	ENST00000465143		H7C2G1	150 aa		4.83	□□□□□ -1.64
ITSN1-223	ENST00000465143	LBH	Q53QV2	105 aa	Predicted RBP	4.83	□□□□□ -1.64
ITSN1-223	ENST00000465143	SERTAD4-AS1	Q5TG53	156 aa		4.83	□□□□□ -1.64
ITSN1-223	ENST00000465143	LINC00337	Q8N6G1	96 aa		4.83	□□□□□ -1.64
ITSN1-223	ENST00000465143	OR13C6P	Q8NH95	151 aa		4.83	□□□□□ -1.64
ITSN1-223	ENST00000465143	NAA38	Q9BRA0	125 aa	Known RBP	4.83	□□□□□ -1.64
ITSN1-223	ENST00000465143	TRBV10-2	A0A0K0K1G8	114 aa		4.82	□□□□□ -1.64
ITSN1-223	ENST00000465143	TSPAN13	O95857	204 aa		4.82	□□□□□ -1.64
ITSN1-223	ENST00000465143	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	4.82	□□□□□ -1.64
ITSN1-223	ENST00000465143	PLAC8	Q9NZF1	115 aa		4.82	□□□□□ -1.64
ITSN1-223	ENST00000465143	C9orf118	A6NHY6	69 aa		4.81	□□□□□ -1.64
ITSN1-223	ENST00000465143		H3BUT2	72 aa		4.81	□□□□□ -1.64
ITSN1-223	ENST00000465143		M0R378	163 aa		4.81	□□□□□ -1.64
ITSN1-223	ENST00000465143		Q1RN00	199 aa		4.81	□□□□□ -1.64
ITSN1-223	ENST00000465143	S100A7L2	Q5SY68	101 aa		4.81	□□□□□ -1.64
ITSN1-223	ENST00000465143	KRTAP7-1	Q8IUC3	87 aa		4.81	□□□□□ -1.64
ITSN1-223	ENST00000465143	NKAPP1	Q8N9T2	125 aa		4.81	□□□□□ -1.64
ITSN1-223	ENST00000465143	IGLV5-37	A0A075B6J1	123 aa		4.8	□□□□□ -1.64
ITSN1-223	ENST00000465143		A0A1W2PNN7	141 aa		4.8	□□□□□ -1.64
ITSN1-223	ENST00000465143	GAGE10	A6NGK3	116 aa		4.8	□□□□□ -1.64
ITSN1-223	ENST00000465143	C22orf24	Q9Y442	160 aa		4.8	□□□□□ -1.64
ITSN1-223	ENST00000465143	IGLV6-57	P01721	117 aa		4.79	□□□□□ -1.64
ITSN1-223	ENST00000465143	PSMB2	P49721	201 aa		4.79	□□□□□ -1.64
ITSN1-223	ENST00000465143	SMIM11B	Q8TCY0	68 aa		4.79	□□□□□ -1.64
ITSN1-223	ENST00000465143	TMEM126A	Q9H061	195 aa		4.79	□□□□□ -1.64
ITSN1-223	ENST00000465143	TRBV10-3	A0A0K0K1G6	114 aa		4.78	□□□□□ -1.64
ITSN1-223	ENST00000465143		M0QXV9	152 aa		4.78	□□□□□ -1.64
ITSN1-223	ENST00000465143	TRIAP1	O43715	76 aa		4.78	□□□□□ -1.64
ITSN1-223	ENST00000465143	KRTAP10-4	P60372	401 aa	Predicted RBP	4.78	□□□□□ -1.64
ITSN1-223	ENST00000465143	MRPL55	Q7Z7F7	128 aa	Known RBP	4.78	□□□□□ -1.64
ITSN1-223	ENST00000465143	LINC00167	Q96N53	147 aa		4.78	□□□□□ -1.64
ITSN1-223	ENST00000465143	FLG2	Q5D862	2391 aa	Predicted RBP	4.78	□□□□□ -1.64
ITSN1-223	ENST00000465143		A0A1B0GV90	55 aa		4.77	□□□□□ -1.65
ITSN1-223	ENST00000465143		A0A1W2PPM0	123 aa		4.77	□□□□□ -1.65
ITSN1-223	ENST00000465143	RPL37AP8	A6NKH3	93 aa		4.77	□□□□□ -1.65
ITSN1-223	ENST00000465143	SCGB1C2	P0DMR2	95 aa		4.77	□□□□□ -1.65
ITSN1-223	ENST00000465143	RPL28	P46779	137 aa	Known RBP	4.77	□□□□□ -1.65
ITSN1-223	ENST00000465143	IGLV1-50	A0A075B6I6	118 aa		4.76	□□□□□ -1.65
ITSN1-223	ENST00000465143	TRAV23DV6	A0A075B6W5	121 aa		4.76	□□□□□ -1.65
ITSN1-223	ENST00000465143	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.76	□□□□□ -1.65
ITSN1-223	ENST00000465143	FABP2	P12104	132 aa		4.76	□□□□□ -1.65
ITSN1-223	ENST00000465143	VAMP3	Q15836	100 aa		4.76	□□□□□ -1.65
ITSN1-223	ENST00000465143	PHF5A	Q7RTV0	110 aa	Known RBP	4.76	□□□□□ -1.65
ITSN1-223	ENST00000465143	OXT	P01178	125 aa		4.75	□□□□□ -1.65
ITSN1-223	ENST00000465143	COX6C	P09669	75 aa		4.75	□□□□□ -1.65
ITSN1-223	ENST00000465143	C6orf99	Q4VX62	202 aa		4.75	□□□□□ -1.65
ITSN1-223	ENST00000465143	KCNQ1DN	Q9H478	68 aa		4.75	□□□□□ -1.65
ITSN1-223	ENST00000465143	CBY1	Q9Y3M2	126 aa		4.75	□□□□□ -1.65
ITSN1-223	ENST00000465143	VPS13B	Q7Z7G8	4022 aa		4.74	□□□□□ -1.65
ITSN1-223	ENST00000465143	PRY	O14603	147 aa		4.74	□□□□□ -1.65
ITSN1-223	ENST00000465143	ZNF73	O43830	326 aa	Predicted RBP	4.74	□□□□□ -1.65
ITSN1-223	ENST00000465143	UBE2B	P63146	152 aa		4.74	□□□□□ -1.65
ITSN1-223	ENST00000465143	LYRM7	Q5U5X0	104 aa		4.74	□□□□□ -1.65
ITSN1-223	ENST00000465143	CLEC2B	Q92478	149 aa		4.74	□□□□□ -1.65
ITSN1-223	ENST00000465143	DIRC1	Q969H9	104 aa		4.74	□□□□□ -1.65
ITSN1-223	ENST00000465143	SPCS1	Q9Y6A9	102 aa		4.74	□□□□□ -1.65
ITSN1-223	ENST00000465143	DMBT1	Q9UGM3	2413 aa	Predicted RBP	4.74	□□□□□ -1.65
ITSN1-223	ENST00000465143	C1orf137	Q5JT78	98 aa		4.73	□□□□□ -1.65
ITSN1-223	ENST00000465143	KRTAP11-1	Q8IUC1	163 aa		4.73	□□□□□ -1.65
ITSN1-223	ENST00000465143		H0YGX0	51 aa		4.72	□□□□□ -1.65
ITSN1-223	ENST00000465143		K7EP34	96 aa		4.72	□□□□□ -1.65
ITSN1-223	ENST00000465143	TCL1B	O95988	128 aa		4.72	□□□□□ -1.65
ITSN1-223	ENST00000465143	COX7B	P24311	80 aa		4.72	□□□□□ -1.65
ITSN1-223	ENST00000465143	REG3G	Q6UW15	175 aa		4.72	□□□□□ -1.65
ITSN1-223	ENST00000465143	FAM218A	Q96MZ4	157 aa		4.72	□□□□□ -1.65
ITSN1-223	ENST00000465143	MYCBP2	O75592	4640 aa		4.71	□□□□□ -1.65
ITSN1-223	ENST00000465143	TRBV20-1	A0A075B6N2	111 aa		4.71	□□□□□ -1.66
ITSN1-223	ENST00000465143	TRBV7-6	A0A0J9YX20	115 aa		4.71	□□□□□ -1.66
ITSN1-223	ENST00000465143	SPRR1A	P35321	89 aa		4.71	□□□□□ -1.66
ITSN1-223	ENST00000465143	ATXN8	Q156A1	80 aa		4.71	□□□□□ -1.66
ITSN1-223	ENST00000465143	SPINK6	Q6UWN8	80 aa		4.71	□□□□□ -1.66
ITSN1-223	ENST00000465143	GTF2H5	Q6ZYL4	71 aa		4.71	□□□□□ -1.66
ITSN1-223	ENST00000465143	PSORS1C2	Q9UIG4	136 aa		4.71	□□□□□ -1.66
ITSN1-223	ENST00000465143	SRRM2	Q9UQ35	2752 aa	Known RBP	4.7	□□□□□ -1.66
ITSN1-223	ENST00000465143	ETDC	A0A1B0GVM5	59 aa		4.7	□□□□□ -1.66
ITSN1-223	ENST00000465143	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	4.7	□□□□□ -1.66
ITSN1-223	ENST00000465143		H3BMG7	143 aa		4.7	□□□□□ -1.66

Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms