RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 CCL18P55774 89 aa1.42□□□□□ -2.18
USH2A-203ENST00000463147 CSAG1Q6PB30 78 aa1.42□□□□□ -2.18
USH2A-203ENST00000463147 LINC00208Q96KT6 92 aa1.42□□□□□ -2.18
USH2A-203ENST00000463147 CDC42SE2Q9NRR3 84 aa1.42□□□□□ -2.18
USH2A-203ENST00000463147 LCE6AA0A183 80 aa1.41□□□□□ -2.18
USH2A-203ENST00000463147 COX7BP24311 80 aa1.41□□□□□ -2.18
USH2A-203ENST00000463147 COX6A2Q02221 97 aa1.41□□□□□ -2.18
USH2A-203ENST00000463147 PRB3Q04118 309 aaPredicted RBP1.41□□□□□ -2.18
USH2A-203ENST00000463147 LINC00575Q6W349 94 aa1.41□□□□□ -2.18
USH2A-203ENST00000463147 TOMM7Q9P0U1 55 aa1.41□□□□□ -2.18
USH2A-203ENST00000463147 NDUFA4O00483 81 aa1.4□□□□□ -2.19
USH2A-203ENST00000463147 LYNX1P0DP58 116 aa1.4□□□□□ -2.19
USH2A-203ENST00000463147 SPAG11BQ08648 103 aa1.4□□□□□ -2.19
USH2A-203ENST00000463147 KAAG1Q9UBP8 84 aa1.4□□□□□ -2.19
USH2A-203ENST00000463147 LINC01558Q9Y6Z2 57 aa1.4□□□□□ -2.19
USH2A-203ENST00000463147 TNCP24821 2201 aa1.39□□□□□ -2.19
USH2A-203ENST00000463147 ZGRF1Q86YA3 2104 aa1.39□□□□□ -2.19
USH2A-203ENST00000463147 Q6ZQY7 126 aa1.39□□□□□ -2.19
USH2A-203ENST00000463147 MED13Q9UHV7 2174 aa1.38□□□□□ -2.19
USH2A-203ENST00000463147 COX17Q14061 63 aa1.38□□□□□ -2.19
USH2A-203ENST00000463147 KLK9Q2XQG4 91 aa1.38□□□□□ -2.19
USH2A-203ENST00000463147 DEFB112Q30KQ8 113 aa1.38□□□□□ -2.19
USH2A-203ENST00000463147 MINOS1Q5TGZ0 78 aa1.38□□□□□ -2.19
USH2A-203ENST00000463147 SPAG11AQ6PDA7 123 aa1.38□□□□□ -2.19
USH2A-203ENST00000463147 DEFB119Q8N690 84 aa1.38□□□□□ -2.19
USH2A-203ENST00000463147 KCNQ1DNQ9H478 68 aa1.38□□□□□ -2.19
USH2A-203ENST00000463147 A0A096LNT2 108 aa1.37□□□□□ -2.19
USH2A-203ENST00000463147 NUPR2A6NF83 97 aa1.37□□□□□ -2.19
USH2A-203ENST00000463147 H0Y9P7 68 aa1.37□□□□□ -2.19
USH2A-203ENST00000463147 RPL37AP61513 92 aaKnown RBP1.37□□□□□ -2.19
USH2A-203ENST00000463147 Q6ZSA8 131 aa1.37□□□□□ -2.19
USH2A-203ENST00000463147 RHPN1-AS1Q9BWJ2 59 aa1.37□□□□□ -2.19
USH2A-203ENST00000463147 NAV3Q8IVL0 2385 aa1.37□□□□□ -2.19
USH2A-203ENST00000463147 CACNA1BQ00975 2339 aa1.37□□□□□ -2.19
USH2A-203ENST00000463147 HTN1P15515 57 aa1.36□□□□□ -2.19
USH2A-203ENST00000463147 SPINK7P58062 85 aa1.36□□□□□ -2.19
USH2A-203ENST00000463147 DEFB1P60022 68 aa1.36□□□□□ -2.19
USH2A-203ENST00000463147 SPINK13Q1W4C9 94 aa1.36□□□□□ -2.19
USH2A-203ENST00000463147 Q8IZM0 81 aa1.36□□□□□ -2.19
USH2A-203ENST00000463147 DMAC1Q96GE9 116 aa1.36□□□□□ -2.19
USH2A-203ENST00000463147 USMG5Q96IX5 58 aa1.36□□□□□ -2.19
USH2A-203ENST00000463147 PLAC8Q9NZF1 115 aa1.36□□□□□ -2.19
USH2A-203ENST00000463147 PRRC2BQ5JSZ5 2229 aaKnown RBP1.36□□□□□ -2.19
USH2A-203ENST00000463147 ASCC3Q8N3C0 2202 aaKnown RBP1.35□□□□□ -2.19
USH2A-203ENST00000463147 H3BUA1 57 aa1.35□□□□□ -2.19
USH2A-203ENST00000463147 RP1L1Q8IWN7 2480 aaPredicted RBP1.35□□□□□ -2.19
USH2A-203ENST00000463147 PDE4DIPQ5VU43 2346 aa1.35□□□□□ -2.19
USH2A-203ENST00000463147 F5P12259 2224 aa1.35□□□□□ -2.19
USH2A-203ENST00000463147 MUC6Q6W4X9 2439 aa1.35□□□□□ -2.19
USH2A-203ENST00000463147 LINC00959A0A1B0GUT2 108 aa1.34□□□□□ -2.19
USH2A-203ENST00000463147 G3V318 75 aa1.34□□□□□ -2.19
USH2A-203ENST00000463147 DNAJC13O75165 2243 aa1.34□□□□□ -2.2
USH2A-203ENST00000463147 CADP27708 2225 aa1.34□□□□□ -2.2
USH2A-203ENST00000463147 CNTRLQ7Z7A1 2325 aa1.33□□□□□ -2.2
USH2A-203ENST00000463147 IGLV5-48A0A075B6I7 105 aa1.33□□□□□ -2.2
USH2A-203ENST00000463147 DEFB131BA0A096LNP1 70 aa1.33□□□□□ -2.2
USH2A-203ENST00000463147 TRGV1A0A0A0MS02 117 aa1.33□□□□□ -2.2
USH2A-203ENST00000463147 A8MTW9 85 aa1.33□□□□□ -2.2
USH2A-203ENST00000463147 K7EQZ3 153 aa1.33□□□□□ -2.2
USH2A-203ENST00000463147 KRTAP10-4P60372 401 aaPredicted RBP1.33□□□□□ -2.2
USH2A-203ENST00000463147 SPATA8Q6RVD6 105 aa1.33□□□□□ -2.2
USH2A-203ENST00000463147 WFDC10BQ8IUB3 73 aa1.33□□□□□ -2.2
USH2A-203ENST00000463147 WFDC13Q8IUB5 93 aa1.33□□□□□ -2.2
USH2A-203ENST00000463147 C5orf56Q8N8D9 126 aa1.33□□□□□ -2.2
USH2A-203ENST00000463147 U3KQA8 63 aa1.33□□□□□ -2.2
USH2A-203ENST00000463147 A0A1B0GU69 56 aa1.32□□□□□ -2.2
USH2A-203ENST00000463147 UQCR11O14957 56 aa1.32□□□□□ -2.2
USH2A-203ENST00000463147 DEFB131AP59861 70 aa1.32□□□□□ -2.2
USH2A-203ENST00000463147 DEFB105AQ8NG35 78 aa1.32□□□□□ -2.2
USH2A-203ENST00000463147 SPRR4Q96PI1 79 aa1.32□□□□□ -2.2
USH2A-203ENST00000463147 KIAA0100Q14667 2235 aaKnown RBP1.31□□□□□ -2.2
USH2A-203ENST00000463147 GVQW2A0A096LPI5 108 aaPredicted RBP1.31□□□□□ -2.2
USH2A-203ENST00000463147 LYNX1G3V0Z9 82 aa1.31□□□□□ -2.2
USH2A-203ENST00000463147 TP53AIP1Q9HCN2 124 aa1.31□□□□□ -2.2
USH2A-203ENST00000463147 PTPRQQ9UMZ3 2332 aa1.31□□□□□ -2.2
USH2A-203ENST00000463147 ACYP2P14621 99 aa1.3□□□□□ -2.2
USH2A-203ENST00000463147 PRO3102Q9H379 93 aa1.3□□□□□ -2.2
USH2A-203ENST00000463147 TECTAO75443 2155 aa1.3□□□□□ -2.2
USH2A-203ENST00000463147 URB1O60287 2271 aaKnown RBP1.29□□□□□ -2.2
USH2A-203ENST00000463147 ANGP03950 147 aaKnown RBP1.29□□□□□ -2.2
USH2A-203ENST00000463147 CLPSL2Q6UWE3 100 aa1.29□□□□□ -2.2
USH2A-203ENST00000463147 NOP10Q9NPE3 64 aaKnown RBP1.29□□□□□ -2.2
USH2A-203ENST00000463147 ABCA1O95477 2261 aa1.29□□□□□ -2.2
USH2A-203ENST00000463147 ASXL3Q9C0F0 2248 aa1.28□□□□□ -2.2
USH2A-203ENST00000463147 COL6A6A6NMZ7 2263 aa1.28□□□□□ -2.2
USH2A-203ENST00000463147 CCL19Q99731 98 aa1.28□□□□□ -2.2
USH2A-203ENST00000463147 C6orf48Q9UBA6 75 aa1.28□□□□□ -2.2
USH2A-203ENST00000463147 PLCE1Q9P212 2302 aa1.27□□□□□ -2.21
USH2A-203ENST00000463147 MED13LQ71F56 2210 aa1.27□□□□□ -2.21
USH2A-203ENST00000463147 H3BUX3 64 aa1.27□□□□□ -2.21
USH2A-203ENST00000463147 DEFB109BQ30KR1 87 aa1.27□□□□□ -2.21
USH2A-203ENST00000463147 KRTAP21-3Q3LHN1 58 aa1.27□□□□□ -2.21
USH2A-203ENST00000463147 Q6ZRX8 168 aa1.27□□□□□ -2.21
USH2A-203ENST00000463147 FLG2Q5D862 2391 aaPredicted RBP1.27□□□□□ -2.21
USH2A-203ENST00000463147 KNL1Q8NG31 2342 aa1.26□□□□□ -2.21
USH2A-203ENST00000463147 MMP24-AS1A0A0U1RRL7 71 aa1.26□□□□□ -2.21
USH2A-203ENST00000463147 PRO0255Q9UI72 69 aa1.26□□□□□ -2.21
USH2A-203ENST00000463147 NBDYA0A0U1RRE5 68 aa1.25□□□□□ -2.21
USH2A-203ENST00000463147 DEFB130BP0DP73 79 aa1.25□□□□□ -2.21
USH2A-203ENST00000463147 DEFB130AP0DP74 79 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms